Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ubr1

Gene Name Gene ID Reads Annotation
ubr1 ENSDARG00000060480 71 ubiquitin protein ligase E3 component n-recognin 1 [Source:ZFIN;Acc:ZDB-GENE-091110-2]










Genes with expression patterns similar to ubr1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ubr1 ENSDARG00000060480 71 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ubiquitin protein ligase E3 component n-recognin 1 [Source:ZFIN;Acc:ZDB-GENE-091110-2]
2. FAM177B 9 1.952 - - - - - 0.952 1.000 - - family with sequence similarity 177 member B
3. fbxo32 ENSDARG00000040277 93 1.952 - - - - - 0.952 1.000 - - F-box protein 32 [Source:ZFIN;Acc:ZDB-GENE-040426-1040]
4. GABRR1 ENSDARG00000043902 71 1.916 - - - - - - 0.924 0.992 - gamma-aminobutyric acid (GABA) A receptor, rho 1 [Source:ZFIN;Acc:ZDB-GENE-040724-212]
5. rabggta ENSDARG00000061024 332 1.823 - 0.915 - - - - 0.908 - - Rab geranylgeranyltransferase subunit alpha [Source:ZFIN;Acc:ZDB-GENE-060929-1042]
6. lcmt1 ENSDARG00000045140, ENSDARG00000111263 413 1.794 - - - - - 0.905 - 0.889 - leucine carboxyl methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040912-75]
7. nitr3a_1 ENSDARG00000110676 44 1.739 0.739 - - - - - 1.000 - - novel immune-type receptor 3a [Source:NCBI gene;Acc:60649]
8. CU469544.1 CU469544.1 219 1.731 - - - - - - 0.758 0.973 -
9. si:dkey-7a20.9 si:dkey-7a20.9 154 1.728 - - - - - 0.876 0.852 - -
10. PRKRIR PRKRIR 261 1.716 - - - - - - 0.845 0.871 -
11. zp2.5 ENSDARG00000086522 15 1.71 - - - - 0.710 - 1.000 - - zona pellucida glycoprotein 2, tandem duplicate 5 [Source:ZFIN;Acc:ZDB-GENE-090306-1]
12. srd5a2a ENSDARG00000043587 21 1.692 - - - - 0.702 - - 0.990 - steroid-5-alpha-reductase, alpha polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-050417-199]
13. usp8 ENSDARG00000063719 643 1.69 - 0.793 - - - - - 0.897 - ubiquitin specific peptidase 8 [Source:ZFIN;Acc:ZDB-GENE-030131-1949]
14. PPM1J ENSDARG00000074690 109 1.684 0.930 - - - - - 0.754 - - protein phosphatase, Mg2+/Mn2+ dependent, 1J [Source:ZFIN;Acc:ZDB-GENE-091230-9]
15. BX897726.3 BX897726.3 220 1.682 - - - - - 0.727 - 0.955 -
16. spop ENSDARG00000100519 177 1.68 0.721 - - - - - - 0.959 - speckle-type POZ protein [Source:ZFIN;Acc:ZDB-GENE-040426-1378]
17. CU459160.1 CU459160.1 104 1.679 - 0.775 - - - 0.904 - - -
18. psmd2 ENSDARG00000103190 141 1.679 0.729 - - - - - - 0.950 - proteasome 26S subunit, non-ATPase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1480]
19. rab1bb ENSDARG00000056479, ENSDARG00000109723 551 1.676 - 0.783 - - - - - 0.893 - RAB1B, member RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-040625-133]
20. cables2b ENSDARG00000017154 131 1.673 - 0.872 - - - - 0.801 - - Cdk5 and Abl enzyme substrate 2b [Source:ZFIN;Acc:ZDB-GENE-090313-249]
21. znf526 ENSDARG00000077143 257 1.646 - - - - - 0.778 0.868 - - zinc finger protein 526 [Source:ZFIN;Acc:ZDB-GENE-100922-260]
22. si:ch211-286m4.1 si:ch211-286m4.1 47 1.642 0.914 - - - 0.728 - - - -
23. EPS8 78 1.628 - 0.828 - - - - 0.800 - - epidermal growth factor receptor pathway substrate 8, transcript variant X14
24. PEG3_2 PEG3_2 468 1.601 - - - - - 0.833 0.768 - -
25. qpctla ENSDARG00000061691 869 1.598 - - - - - 0.800 - 0.798 - glutaminyl-peptide cyclotransferase-like a [Source:ZFIN;Acc:ZDB-GENE-030131-1441]
26. als2b ENSDARG00000076924 738 1.587 - 0.874 - - - - - 0.713 - amyotrophic lateral sclerosis 2b (juvenile) [Source:ZFIN;Acc:ZDB-GENE-080929-1]
27. zgc:194314 zgc:194314 982 1.557 - - - - - 0.770 0.787 - -
28. gpr98 gpr98 717 1.524 0.768 - - - - - - 0.756 -
29. ptprn2 ENSDARG00000035970, ENSDARG00000114075 354 1.518 0.761 - - - - - - 0.757 - protein tyrosine phosphatase, receptor type, N polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3758]
30. flvcr2b ENSDARG00000031506 170 1.51 - 0.752 - - - - 0.758 - - feline leukemia virus subgroup C cellular receptor family, member 2b [Source:ZFIN;Acc:ZDB-GENE-041210-312]
31. smim15 ENSDARG00000086699, ENSDARG00000114331 1945 1.503 - 0.798 - - - - - 0.705 - small integral membrane protein 15 [Source:ZFIN;Acc:ZDB-GENE-070410-48]
32. THAP6 THAP6 57 1.487 0.768 - - - - - 0.719 - -
33. si:dkey-220a11.10 si:dkey-220a11.10 258 1.486 - 0.741 - - - - 0.745 - -
34. zgc:114037 63 1.469 0.762 0.707 - - - - - - - zgc:114037
35. si:dkey-157l19.2 ENSDARG00000060340 635 1.462 - 0.754 - - - 0.708 - - - si:dkey-157l19.2 [Source:ZFIN;Acc:ZDB-GENE-090313-190]
36. zgc:194398 ENSDARG00000078250 815 1.453 - 0.714 - - - 0.739 - - - zgc:194398 [Source:ZFIN;Acc:ZDB-GENE-081022-111]
37. C9H2orf40 C9H2orf40 212 1.441 0.711 0.730 - - - - - - -
38. gata4 ENSDARG00000098952 11 1 - - - - - - 1.000 - - GATA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-980526-476]
39. si:dkey-122c11.1 ENSDARG00000093747 19 1 - - - - - - 1.000 - - si:dkey-122c11.1 [Source:ZFIN;Acc:ZDB-GENE-060531-74]
40. C20H2orf70 C20H2orf70 8 1 1.000 - - - - - - - -
41. pdcb ENSDARG00000017634 10 1 - - - - - - 1.000 - - phosducin b [Source:ZFIN;Acc:ZDB-GENE-031023-2]
42. irgq2 ENSDARG00000068657 4 1 - - - - - - 1.000 - - immunity-related GTPase family, q2 [Source:ZFIN;Acc:ZDB-GENE-051212-7]
43. si:ch73-248e21.5 ENSDARG00000088283 19 1 - - - - - - 1.000 - - si:ch73-248e21.5 [Source:ZFIN;Acc:ZDB-GENE-120215-255]
44. satb2 ENSDARG00000061885 6 1 - - - - - - 1.000 - - SATB homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-070912-212]
45. C25H12orf29 C25H12orf29 31 1 - - - - - - 1.000 - -
46. zgc:171551 ENSDARG00000073708, ENSDARG00000111940 24 1 - - - - - - 1.000 - - zgc:171551 [Source:ZFIN;Acc:ZDB-GENE-080220-8]
47. si:ch211-197k17.3 ENSDARG00000096214 2 1 1.000 - - - - - - - - si:ch211-197k17.3 [Source:ZFIN;Acc:ZDB-GENE-110914-193]
48. pth2r ENSDARG00000006678, ENSDARG00000112414 46 1 - - - - - - 1.000 - - parathyroid hormone 2 receptor [Source:ZFIN;Acc:ZDB-GENE-991123-10]
49. PCDH10 PCDH10 7 1 - - - - - - 1.000 - -
50. pdcl ENSDARG00000009480 12 1 1.000 - - - - - - - - phosducin-like [Source:ZFIN;Acc:ZDB-GENE-030131-2365]
51. pigr ENSDARG00000101890 10 1 - - - - - - 1.000 - - polymeric immunoglobulin receptor [Source:ZFIN;Acc:ZDB-GENE-060503-327]
52. si:ch211-234c11.3_1 ENSDARG00000093615 10 1 - - - - - - 1.000 - - si:ch211-234c11.3 [Source:ZFIN;Acc:ZDB-GENE-110914-93]
53. b3gat3 ENSDARG00000001939 58 1 - - - - - - 1.000 - - beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I) [Source:ZFIN;Acc:ZDB-GENE-020419-3]
54. si:ch211-190k17.13 si:ch211-190k17.13 48 1 - - - - - - 1.000 - -
55. BTBD17_1 BTBD17_1 42 1 1.000 - - - - - - - -
56. TMEM138 ENSDARG00000090543 105 1 - - - - - - 1.000 - - transmembrane protein 138 [Source:ZFIN;Acc:ZDB-GENE-120912-1]
57. KCNIP4 ENSDARG00000088100 86 1 1.000 - - - - - - - - potassium voltage-gated channel interacting protein 4 [Source:HGNC Symbol;Acc:HGNC:30083]
58. BX537305.1 ENSDARG00000113834 10 1 - - - - - - 1.000 - -
59. zgc:172133 ENSDARG00000075248 6 1 - - - - - - 1.000 - - zgc:172133 [Source:ZFIN;Acc:ZDB-GENE-080204-48]
60. ms4a17a.17 ENSDARG00000054898, ENSDARG00000116378 37 1 - - - - - - 1.000 - - membrane-spanning 4-domains, subfamily A, member 17A.17 [Source:ZFIN;Acc:ZDB-GENE-070424-27]
61. WDPCP ENSDARG00000074590 35 1 1.000 - - - - - - - - WD repeat containing planar cell polarity effector [Source:ZFIN;Acc:ZDB-GENE-100405-4]
62. si:dkeyp-67a8.4 ENSDARG00000090099, ENSDARG00000092823 1 1 1.000 - - - - - - - - si:dkeyp-67a8.4 [Source:ZFIN;Acc:ZDB-GENE-070912-666]
63. CR762480.5 CR762480.5 1 1 - - - - - - 1.000 - -
64. CT583709.2 CT583709.2 55 1 1.000 - - - - - - - -
65. snapc1a ENSDARG00000029569 25 1 1.000 - - - - - - - - small nuclear RNA activating complex, polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1031]
66. rspo1 ENSDARG00000104340, ENSDARG00000111655 13 1 - - - - - - 1.000 - - R-spondin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-44]
67. PLEKHG4B PLEKHG4B 1 1 1.000 - - - - - - - -
68. cyp11a1 ENSDARG00000002347, ENSDARG00000111941 209 1 - - - - - - 1.000 - - cytochrome P450, family 11, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-010306-1]
69. DNER ENSDARG00000061031 123 1 1.000 - - - - - - - - delta/notch-like EGF repeat containing [Source:ZFIN;Acc:ZDB-GENE-130502-1]
70. si:ch73-189n23.1 ENSDARG00000086247 15 1 - - - - - - 1.000 - - si:ch73-189n23.1 [Source:ZFIN;Acc:ZDB-GENE-070705-217]
71. fam178a fam178a 29 1 1.000 - - - - - - - -
72. g6pcb ENSDARG00000014967 8 1 - - - - - - 1.000 - - glucose-6-phosphatase b, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-081223-2]
73. CU929052.1 CU929052.1 642 1 - - - - - - 1.000 - -
74. CR387932.1 ENSDARG00000097344 2 1 - - - - - - 1.000 - -
75. top3b ENSDARG00000027586 8 1 - - - - - - 1.000 - - DNA topoisomerase III beta [Source:ZFIN;Acc:ZDB-GENE-070705-37]
76. si:ch211-233h19.2 ENSDARG00000042213 47 1 - - - - - - 1.000 - - si:ch211-233h19.2 [Source:ZFIN;Acc:ZDB-GENE-061009-14]
77. BX901974.1 ENSDARG00000067592 2 1 - - - - - - 1.000 - -
78. CLNK 8 1 - - - - - - 1.000 - - cytokine dependent hematopoietic cell linker
79. mmrn2a ENSDARG00000076135 37 1 - - - - - - 1.000 - - multimerin 2a [Source:ZFIN;Acc:ZDB-GENE-080424-3]
80. ndrg1b ENSDARG00000010420 116 1 1.000 - - - - - - - - N-myc downstream regulated 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1648]
81. AL935272.2 AL935272.2 37 1 1.000 - - - - - - - -
82. CYP27A1_2 CYP27A1_2 5 1 - - - - - - 1.000 - -
83. si:ch211-283l16.1 ENSDARG00000112586 131 1 - - - - - - 1.000 - - si:ch211-283l16.1 [Source:ZFIN;Acc:ZDB-GENE-110913-44]
84. BSN_1 BSN_1 21 1 1.000 - - - - - - - -
85. aspscr1_1 ENSDARG00000105321 4 1 1.000 - - - - - - - - alveolar soft part sarcoma chromosome region, candidate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-31]
86. chrna9 ENSDARG00000054680 4 1 1.000 - - - - - - - - cholinergic receptor, nicotinic, alpha 9 [Source:ZFIN;Acc:ZDB-GENE-090312-63]
87. zfp64 ENSDARG00000061147 44 1 1.000 - - - - - - - - zinc finger protein 64 homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-031118-80]
88. si:ch1073-181h11.2 ENSDARG00000103883 24 1 - - - - - - 1.000 - - si:ch1073-181h11.2 [Source:ZFIN;Acc:ZDB-GENE-081031-58]
89. si:dkey-238o14.1 ENSDARG00000100099 1 1 1.000 - - - - - - - - si:dkey-238o14.1 [Source:ZFIN;Acc:ZDB-GENE-081103-10]
90. EPM2AIP1 EPM2AIP1 4 1 1.000 - - - - - - - -
91. U1_38 U1_38 1 1 - - - - - - 1.000 - -
92. BX897747.1 ENSDARG00000117746 11 1 1.000 - - - - - - - -
93. si:dkey-14d8.19 si:dkey-14d8.19 12 1 1.000 - - - - - - - -
94. CELA1 CELA1 14 1 - - - - - - 1.000 - -
95. zgc:152977 ENSDARG00000077178 59 1 - - - - - - 1.000 - - zgc:152977 [Source:ZFIN;Acc:ZDB-GENE-060825-353]
96. si:ch211-122l24.2 si:ch211-122l24.2 1 1 1.000 - - - - - - - -
97. tbx5b ENSDARG00000092060 37 1 - - - - - - 1.000 - - T-box 5b [Source:ZFIN;Acc:ZDB-GENE-060601-2]
98. si:ch211-222k6.2 ENSDARG00000087046 144 1 1.000 - - - - - - - - si:ch211-222k6.2 [Source:ZFIN;Acc:ZDB-GENE-030131-9038]
99. fscn1b ENSDARG00000037747, ENSDARG00000111370 75 1 - - - - - - 1.000 - - fascin actin-bundling protein 1b [Source:ZFIN;Acc:ZDB-GENE-120507-1]
100. KCNT2 ENSDARG00000075812 23 1 1.000 - - - - - - - - potassium channel, subfamily T, member 2 [Source:ZFIN;Acc:ZDB-GENE-130530-783]

There are 1182 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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