Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ubn1

Gene Name Gene ID Reads Annotation
ubn1 ENSDARG00000063169, ENSDARG00000115275 32 ubinuclein 1 [Source:ZFIN;Acc:ZDB-GENE-070928-28]










Genes with expression patterns similar to ubn1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ubn1 ENSDARG00000063169, ENSDARG00000115275 32 8 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ubinuclein 1 [Source:ZFIN;Acc:ZDB-GENE-070928-28]
2. mb21d2b mb21d2b 84 1.889 - - - - - 0.889 1.000 - -
3. SCARNA13 SCARNA13 122 1.803 - - - - - 0.940 0.863 - -
4. PGBD4_4 PGBD4_4 15 1.786 0.942 - - - - 0.844 - - -
5. C25H15orf27 C25H15orf27 69 1.781 - - - - - 1.000 0.781 - -
6. zgc:174356 ENSDARG00000088263, ENSDARG00000116818 6 1.774 - - 0.893 - - - 0.881 - - zgc:174356 [Source:ZFIN;Acc:ZDB-GENE-080215-21]
7. CABZ01054391.1 ENSDARG00000103952 2 1.737 - - 0.893 - - 0.844 - - - NACHT, LRR and PYD domains-containing protein 12-like [Source:NCBI gene;Acc:100150280]
8. C25HXorf38_1 C25HXorf38_1 35 1.732 0.732 - - - - - 1.000 - -
9. si:ch211-131e11.14 si:ch211-131e11.14 7 1.725 - - - - - 0.844 0.881 - -
10. ppm1na ENSDARG00000010231 3 1.725 - - - - - 0.844 0.881 - - protein phosphatase, Mg2+/Mn2+ dependent, 1Na (putative) [Source:ZFIN;Acc:ZDB-GENE-040426-2731]
11. si:ch211-161m3.4 ENSDARG00000103375 10 1.725 - - - - - 0.844 0.881 - - si:ch211-161m3.4 [Source:ZFIN;Acc:ZDB-GENE-110914-169]
12. CR855327.1 CR855327.1 6 1.725 - - - - - 0.844 0.881 - -
13. usp46 ENSDARG00000045343 65 1.717 - - - - - 0.844 0.873 - - ubiquitin specific peptidase 46 [Source:ZFIN;Acc:ZDB-GENE-070705-213]
14. efcab2 ENSDARG00000074323 88 1.7 - - - - - 0.940 0.760 - - EF-hand calcium binding domain 2 [Source:ZFIN;Acc:ZDB-GENE-070521-5]
15. si:ch211-226h8.14 ENSDARG00000088713, ENSDARG00000116143 75 1.681 - - - - - 0.844 0.837 - - si:ch211-226h8.14 [Source:ZFIN;Acc:ZDB-GENE-050208-470]
16. grm2a ENSDARG00000004150 64 1.672 0.732 - - - - 0.940 - - - glutamate receptor, metabotropic 2a [Source:ZFIN;Acc:ZDB-GENE-030131-8097]
17. LRRC61 ENSDARG00000077357 55 1.663 - - - - - - 0.887 - 0.776 leucine rich repeat containing 61 [Source:ZFIN;Acc:ZDB-GENE-060616-245]
18. CABZ01087549.1 CABZ01087549.1 108 1.64 0.732 - - - - 0.908 - - -
19. CCDC87 ENSDARG00000045683 27 1.634 - - - - - 0.709 0.925 - - coiled-coil domain containing 87 [Source:ZFIN;Acc:ZDB-GENE-041210-118]
20. syce2 ENSDARG00000103187 12 1.629 0.732 - 0.897 - - - - - - synaptonemal complex central element protein 2 [Source:ZFIN;Acc:ZDB-GENE-050512-1]
21. chrna2b ENSDARG00000057025 217 1.619 0.751 - - - - 0.868 - - - cholinergic receptor, nicotinic, alpha 2b (neuronal) [Source:ZFIN;Acc:ZDB-GENE-041001-99]
22. ccdc149b ENSDARG00000020857, ENSDARG00000111838 28 1.617 - - - - - 0.891 0.726 - - coiled-coil domain containing 149b [Source:ZFIN;Acc:ZDB-GENE-040718-465]
23. si:ch211-202m22.1 ENSDARG00000094491 24 1.613 0.732 - - - - - 0.881 - - si:ch211-202m22.1 [Source:ZFIN;Acc:ZDB-GENE-060531-31]
24. trpc2 trpc2 10 1.613 0.732 - - - - - 0.881 - -
25. pnp4b ENSDARG00000029230 6 1.613 0.732 - - - - - 0.881 - - purine nucleoside phosphorylase 4b [Source:ZFIN;Acc:ZDB-GENE-040426-1887]
26. rx3 ENSDARG00000052893 43 1.613 0.732 - - - - - 0.881 - - retinal homeobox gene 3 [Source:ZFIN;Acc:ZDB-GENE-990415-238]
27. CR942805.3 CR942805.3 7 1.613 0.732 - - - - - 0.881 - -
28. fam43b ENSDARG00000070222 92 1.58 - - 0.828 - - 0.752 - - - family with sequence similarity 43, member B [Source:ZFIN;Acc:ZDB-GENE-040912-11]
29. APEH ENSDARG00000008703 73 1.577 0.732 - - - - 0.845 - - - acylaminoacyl-peptide hydrolase [Source:ZFIN;Acc:ZDB-GENE-030131-9870]
30. lonrf1 ENSDARG00000075048 13 1.576 0.732 - - - - 0.844 - - - LON peptidase N-terminal domain and ring finger 1 [Source:ZFIN;Acc:ZDB-GENE-101021-4]
31. si:ch211-244b2.4 ENSDARG00000045530 32 1.576 0.732 - - - - 0.844 - - - si:ch211-244b2.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8699]
32. slc24a1 ENSDARG00000041431 33 1.511 0.732 - - - - - 0.779 - - solute carrier family 24 (sodium/potassium/calcium exchanger), member 1 [Source:ZFIN;Acc:ZDB-GENE-060503-191]
33. cyp2p10 ENSDARG00000042990 176 1.488 0.748 - - - - - 0.740 - - cytochrome P450, family 2, subfamily P, polypeptide 10 [Source:ZFIN;Acc:ZDB-GENE-040120-1]
34. BX664721.1 ENSDARG00000051804 21 1.486 0.732 - - - - - 0.754 - -
35. pcdh18a ENSDARG00000089805 1096 1.475 0.767 - - - - 0.708 - - - protocadherin 18a [Source:ZFIN;Acc:ZDB-GENE-000607-1]
36. si:dkey-204f11.49p si:dkey-204f11.49p 97 1.448 0.732 - - - - - 0.716 - -
37. wbscr27 wbscr27 70 1.446 0.732 - - - - 0.714 - - -
38. tmem35 ENSDARG00000052567 5685 1.424 - - - - - 0.717 - - 0.707 transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
39. zgc:173713 17 1 - - - - - 1.000 - - - zgc:173713, transcript variant X2
40. bcan ENSDARG00000099412 18 1 - - - - - 1.000 - - - brevican [Source:ZFIN;Acc:ZDB-GENE-030131-6045]
41. ZNF337_21 ZNF337_21 53 1 - - - - - 1.000 - - -
42. CABZ01088933.1 CABZ01088933.1 40 1 - - - - - - 1.000 - -
43. trpm1a ENSDARG00000011259, ENSDARG00000111200, ENSDARG00000112747 48 1 - - - - - 1.000 - - - transient receptor potential cation channel, subfamily M, member 1a [Source:ZFIN;Acc:ZDB-GENE-070112-1372]
44. tbx16 ENSDARG00000007329 255 1 - - - - - - 1.000 - - T-box 16 [Source:ZFIN;Acc:ZDB-GENE-990615-5]
45. cacnb4a ENSDARG00000009738 28 1 1.000 - - - - - - - - calcium channel, voltage-dependent, beta 4a subunit [Source:ZFIN;Acc:ZDB-GENE-080320-2]
46. si:dkey-182g1.5 si:dkey-182g1.5 22 1 - - - - - 1.000 - - -
47. TTC18 TTC18 58 1 - - - - - - 1.000 - -
48. NAT14 ENSDARG00000115349 21 1 - - - - - - 1.000 - - N-acetyltransferase 14 (GCN5-related, putative) [Source:ZFIN;Acc:ZDB-GENE-060825-15]
49. LRP3 ENSDARG00000008485 1401 1 - - - - - 1.000 - - - low density lipoprotein receptor-related protein 3 [Source:ZFIN;Acc:ZDB-GENE-080116-3]
50. adat1 ENSDARG00000061348 62 1 - - - - - - 1.000 - - adenosine deaminase, tRNA-specific 1 [Source:ZFIN;Acc:ZDB-GENE-070410-64]
51. cdadc1 ENSDARG00000036650 16 1 - - - - - 1.000 - - - cytidine and dCMP deaminase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041114-163]
52. EMB ENSDARG00000059485 35 1 - - - - - - 1.000 - - embigin [Source:ZFIN;Acc:ZDB-GENE-070705-158]
53. si:dkey-29d8.3 ENSDARG00000091879 21 1 1.000 - - - - - - - - si:dkey-29d8.3 [Source:ZFIN;Acc:ZDB-GENE-070912-508]
54. vsx1 ENSDARG00000056292, ENSDARG00000109766 442 1 - - - - - 1.000 - - - visual system homeobox 1 homolog, chx10-like [Source:ZFIN;Acc:ZDB-GENE-990415-205]
55. si:ch211-269e2.1 ENSDARG00000074225 128 1 1.000 - - - - - - - - si:ch211-269e2.1 [Source:ZFIN;Acc:ZDB-GENE-070912-267]
56. si:dkey-287i17.5 si:dkey-287i17.5 5 1 - - - - - - 1.000 - -
57. rnaset2l ENSDARG00000058413 17 1 - - - - - - 1.000 - - ribonuclease T2, like [Source:ZFIN;Acc:ZDB-GENE-090819-2]
58. si:dkey-26i24.1 ENSDARG00000102673 4 1 - - - - - 1.000 - - - si:dkey-26i24.1 [Source:ZFIN;Acc:ZDB-GENE-110913-88]
59. si:ch1073-185p12.2 ENSDARG00000100199 7 1 - - - - - - 1.000 - - si:ch1073-185p12.2 [Source:ZFIN;Acc:ZDB-GENE-110411-196]
60. si:dkey-106m10.5 si:dkey-106m10.5 10 1 - - - - - - 1.000 - -
61. zfpm2b ENSDARG00000100560 125 1 - - - - - 1.000 - - - zinc finger protein, FOG family member 2b [Source:ZFIN;Acc:ZDB-GENE-060130-5]
62. cacnb2a ENSDARG00000099045 374 1 - - - - - - 1.000 - - calcium channel, voltage-dependent, beta 2a [Source:ZFIN;Acc:ZDB-GENE-080808-7]
63. antxr1a ENSDARG00000025672 32 1 1.000 - - - - - - - - ANTXR cell adhesion molecule 1a [Source:ZFIN;Acc:ZDB-GENE-110411-15]
64. si:ch211-64i20.3 ENSDARG00000089934, ENSDARG00000105063 42 1 - - - - - 1.000 - - - si:ch211-64i20.3 [Source:ZFIN;Acc:ZDB-GENE-110913-55]
65. APOL4 APOL4 27 1 - - - - - - 1.000 - -
66. irgf3 ENSDARG00000062820 20 1 - - - - - - 1.000 - - immunity-related GTPase family, f3 [Source:ZFIN;Acc:ZDB-GENE-051212-6]
67. zgc:172120 ENSDARG00000069199 278 1 - - - - - - 1.000 - - zgc:172120 [Source:ZFIN;Acc:ZDB-GENE-080204-46]
68. alg10 ENSDARG00000053917 491 0.989 0.989 - - - - - - - - asparagine-linked glycosylation 10 [Source:ZFIN;Acc:ZDB-GENE-110310-8]
69. myb ENSDARG00000053666, ENSDARG00000114024 58 0.98 0.980 - - - - - - - - v-myb avian myeloblastosis viral oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-991110-14]
70. U11 U11 11 0.98 0.980 - - - - - - - -
71. rnf17 ENSDARG00000056387, ENSDARG00000113359 36 0.973 - - - - - - 0.973 - - ring finger protein 17 [Source:ZFIN;Acc:ZDB-GENE-030131-6451]
72. nub1 ENSDARG00000061417 33 0.966 - - - - - 0.966 - - - negative regulator of ubiquitin-like proteins 1 [Source:ZFIN;Acc:ZDB-GENE-080212-11]
73. zgc:122979 ENSDARG00000004187 61 0.966 - - - - - 0.966 - - - zgc:122979 [Source:ZFIN;Acc:ZDB-GENE-051127-45]
74. grm3 ENSDARG00000031712, ENSDARG00000110535 30 0.966 - - - - - 0.966 - - - glutamate receptor, metabotropic 3 [Source:ZFIN;Acc:ZDB-GENE-061009-13]
75. mocs3 ENSDARG00000008239 163 0.946 - - - - - - 0.946 - - molybdenum cofactor synthesis 3 [Source:ZFIN;Acc:ZDB-GENE-040426-782]
76. HIST1H4B HIST1H4B 21 0.942 0.942 - - - - - - - -
77. zgc:162144 ENSDARG00000037603, ENSDARG00000109982 11 0.942 0.942 - - - - - - - - zgc:162144 [Source:ZFIN;Acc:ZDB-GENE-030131-7630]
78. dmrta2 ENSDARG00000039412 328 0.942 0.942 - - - - - - - - DMRT-like family A2 [Source:ZFIN;Acc:ZDB-GENE-041116-2]
79. zgc:175008 zgc:175008 55 0.942 0.942 - - - - - - - -
80. ENSDARG00000092910 ENSDARG00000092910 44 0.942 0.942 - - - - - - - -
81. mkks ENSDARG00000016139 70 0.942 0.942 - - - - - - - - McKusick-Kaufman syndrome [Source:ZFIN;Acc:ZDB-GENE-040426-757]
82. vcam1 vcam1 243 0.942 0.942 - - - - - - - -
83. si:ch211-233h19.2 ENSDARG00000042213 47 0.942 0.942 - - - - - - - - si:ch211-233h19.2 [Source:ZFIN;Acc:ZDB-GENE-061009-14]
84. zgc:110434_1 30 0.942 0.942 - - - - - - - - zgc:110434
85. pcgf5b ENSDARG00000052388 163 0.942 0.942 - - - - - - - - polycomb group ring finger 5b [Source:ZFIN;Acc:ZDB-GENE-060512-34]
86. ptprdb ENSDARG00000019945 48 0.942 0.942 - - - - - - - - protein tyrosine phosphatase, receptor type, D, b [Source:ZFIN;Acc:ZDB-GENE-070615-38]
87. phactr3a ENSDARG00000058243 150 0.942 0.942 - - - - - - - - phosphatase and actin regulator 3a [Source:ZFIN;Acc:ZDB-GENE-080220-4]
88. CABZ01117079.1 CABZ01117079.1 123 0.942 0.942 - - - - - - - -
89. CR848836.6 CR848836.6 93 0.942 0.942 - - - - - - - -
90. si:dkey-238f9.1 ENSDARG00000079446 51 0.942 0.942 - - - - - - - - si:dkey-238f9.1 [Source:ZFIN;Acc:ZDB-GENE-091204-297]
91. CT027762.3 CT027762.3 17 0.942 0.942 - - - - - - - -
92. cpeb4 cpeb4 57 0.942 0.942 - - - - - - - -
93. mfsd2b ENSDARG00000030263 12 0.94 - - - - - 0.940 - - - major facilitator superfamily domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-041210-308]
94. zbtb12.2 ENSDARG00000070658 55 0.94 - - - - - 0.940 - - - zinc finger and BTB domain containing 12, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060503-27]
95. ANKRD13D ENSDARG00000098140 88 0.94 - - - - - 0.940 - - - ankyrin repeat domain 13 family, member D [Source:ZFIN;Acc:ZDB-GENE-101007-3]
96. HIST1H4H HIST1H4H 26 0.94 - - - - - 0.940 - - -
97. si:dkey-103d23.5 26 0.94 - - - - - 0.940 - - - si:dkey-103d23.5
98. csf2rb ENSDARG00000076586, ENSDARG00000112627, ENSDARG00000114668 9 0.94 - - - - - 0.940 - - - colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage) [Source:ZFIN;Acc:ZDB-GENE-080115-1]
99. si:dkey-16p19.3 si:dkey-16p19.3 119 0.94 - - - - - 0.940 - - -
100. GRIK5 ENSDARG00000101449, ENSDARG00000111384 43 0.94 - - - - - 0.940 - - - glutamate receptor, ionotropic, kainate 5 [Source:ZFIN;Acc:ZDB-GENE-070821-6]

There are 962 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA