Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ubl3a

Gene Name Gene ID Reads Annotation
ubl3a ENSDARG00000099532, ENSDARG00000113955 3475 ubiquitin-like 3a [Source:ZFIN;Acc:ZDB-GENE-030131-3431]










Genes with expression patterns similar to ubl3a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ubl3a ENSDARG00000099532, ENSDARG00000113955 3475 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ubiquitin-like 3a [Source:ZFIN;Acc:ZDB-GENE-030131-3431]
2. atl3 ENSDARG00000004270 2806 2.761 - - - - - 0.857 0.948 0.956 - atlastin 3 [Source:ZFIN;Acc:ZDB-GENE-041010-109]
3. yap1 ENSDARG00000068401, ENSDARG00000112952 16365 2.674 - - - - - - 0.849 0.893 0.932 Yes-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9710]
4. sec61g ENSDARG00000018637, ENSDARG00000117172 4899 2.564 - - - - - 0.864 0.711 - 0.989 Sec61 translocon gamma subunit [Source:ZFIN;Acc:ZDB-GENE-040718-203]
5. vta1 ENSDARG00000013732 6072 2.546 - 0.808 - - - 0.746 - - 0.992 vesicle (multivesicular body) trafficking 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2154]
6. copb1 ENSDARG00000056557, ENSDARG00000116045 7395 2.536 - 0.718 - - - - 0.857 - 0.961 coatomer protein complex, subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-030219-38]
7. arl1 ENSDARG00000101680 5973 2.5 - 0.772 - - - - 0.805 0.923 - ADP-ribosylation factor-like 1 [Source:ZFIN;Acc:ZDB-GENE-040718-175]
8. tgm1l4 ENSDARG00000101407 800 2.474 0.770 0.792 - - - 0.912 - - - transglutaminase 1 like 4 [Source:ZFIN;Acc:ZDB-GENE-050913-29]
9. rrm2_1 ENSDARG00000020711, ENSDARG00000078069 11634 2.426 - - - - - 0.858 0.784 0.784 - ribonucleotide reductase M2 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-25]
10. scinlb ENSDARG00000058348 1466 2.408 - 0.728 - - - 0.743 0.937 - - scinderin like b [Source:ZFIN;Acc:ZDB-GENE-040426-2068]
11. prpf39 ENSDARG00000100209 3721 1.957 - - - - - - 0.960 - 0.997 PRP39 pre-mRNA processing factor 39 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030616-420]
12. akr1a1b ENSDARG00000052030, ENSDARG00000112549 2505 1.918 - - - - - 0.920 - - 0.998 aldo-keto reductase family 1, member A1b (aldehyde reductase) [Source:ZFIN;Acc:ZDB-GENE-050417-118]
13. zgc:101569 ENSDARG00000038876 1525 1.918 - - - - - 0.941 - 0.977 - zgc:101569 [Source:ZFIN;Acc:ZDB-GENE-041010-72]
14. tmed4 ENSDARG00000024954 3476 1.914 - - - - - 0.976 0.938 - - transmembrane p24 trafficking protein 4 [Source:ZFIN;Acc:ZDB-GENE-040625-140]
15. snrpd1 ENSDARG00000011648 8615 1.913 - - - - - - 0.928 - 0.985 small nuclear ribonucleoprotein D1 polypeptide [Source:ZFIN;Acc:ZDB-GENE-020419-14]
16. ckap5 ENSDARG00000102674 5068 1.903 - - - - - - 0.921 - 0.982 cytoskeleton associated protein 5 [Source:ZFIN;Acc:ZDB-GENE-051120-174]
17. si:ch211-198a12.6 ENSDARG00000074624, ENSDARG00000114808 8911 1.887 - - - - - 0.914 - - 0.973 si:ch211-198a12.6 [Source:ZFIN;Acc:ZDB-GENE-030131-1683]
18. TMEM184B TMEM184B 1280 1.885 - - - - - 0.925 0.960 - -
19. brd1b ENSDARG00000051798 1712 1.884 - - - - - 0.905 - 0.979 - bromodomain containing 1b [Source:ZFIN;Acc:ZDB-GENE-070209-98]
20. gbas gbas 735 1.884 - - - - - 0.936 0.948 - -
21. rpz5 ENSDARG00000075718 1703 1.876 - - - - - - 0.908 0.968 - rapunzel 5 [Source:ZFIN;Acc:ZDB-GENE-030131-4678]
22. dnajb9a ENSDARG00000052072 578 1.869 - - - - - 0.921 0.948 - - DnaJ (Hsp40) homolog, subfamily B, member 9a [Source:ZFIN;Acc:ZDB-GENE-050626-115]
23. pvrl1b 1645 1.867 - - - - - 0.896 - 0.971 - poliovirus receptor-related 1b
24. tfam ENSDARG00000063145 4524 1.866 - - - - - 0.945 0.921 - - transcription factor A, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-061013-552]
25. ik ENSDARG00000004161 3132 1.865 - - - - - 0.915 0.950 - - IK cytokine [Source:ZFIN;Acc:ZDB-GENE-030131-960]
26. NFATC3 NFATC3 1712 1.863 - - - - - 0.878 - 0.985 -
27. CABZ01084815.1 CABZ01084815.1 351 1.853 - - - - - 0.909 0.944 - -
28. tpd52l2b ENSDARG00000013655 9460 1.851 - - - - - - 0.955 0.896 - tumor protein D52-like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-822]
29. ABI3_1 ABI3_1 511 1.85 - - - - - 0.909 0.941 - -
30. CACHD1 ENSDARG00000061590 1287 1.85 - - - - - 0.897 0.953 - - cache domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100819-3]
31. fermt1 ENSDARG00000052652 2394 1.846 - - - - - - 0.881 0.965 - fermitin family member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3264]
32. acn9 acn9 520 1.844 - - - - - 0.895 0.949 - -
33. safb ENSDARG00000020467 5608 1.842 - - - - - 0.902 0.940 - - scaffold attachment factor B [Source:ZFIN;Acc:ZDB-GENE-030131-698]
34. zgc:163030 ENSDARG00000069192 2963 1.84 - - - - - 0.922 0.918 - - zgc:163030 [Source:ZFIN;Acc:ZDB-GENE-060810-77]
35. cux1b ENSDARG00000043134 641 1.837 - - - - - 0.884 0.953 - - cut-like homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-040801-260]
36. suz12b ENSDARG00000098924, ENSDARG00000114239, ENSDARG00000114524 1947 1.83 - - - - - 0.881 0.949 - - SUZ12, polycomb repressive complex 2 subunit b [Source:ZFIN;Acc:ZDB-GENE-030131-3255]
37. azin1b ENSDARG00000035869, ENSDARG00000115647 9761 1.827 - 0.840 - - - - - - 0.987 antizyme inhibitor 1b [Source:ZFIN;Acc:ZDB-GENE-030121-1]
38. cpda ENSDARG00000055648, ENSDARG00000110375, ENSDARG00000115395 2062 1.826 - - - - - 0.848 - 0.978 - carboxypeptidase D, a [Source:ZFIN;Acc:ZDB-GENE-081112-2]
39. lamb4 ENSDARG00000039133 1220 1.822 - - - - - 0.901 0.921 - - laminin, beta 4 [Source:ZFIN;Acc:ZDB-GENE-021226-2]
40. snap29 ENSDARG00000038518 1609 1.821 - - - - - 0.832 - 0.989 - synaptosomal-associated protein 29 [Source:ZFIN;Acc:ZDB-GENE-041111-226]
41. mrpl24 ENSDARG00000019222 798 1.818 - - - - - 0.882 0.936 - - mitochondrial ribosomal protein L24 [Source:ZFIN;Acc:ZDB-GENE-040718-98]
42. sra1 ENSDARG00000053619 2799 1.817 - - - - - 0.906 - 0.911 - steroid receptor RNA activator 1 [Source:ZFIN;Acc:ZDB-GENE-040625-6]
43. arhgap29b ENSDARG00000017748 812 1.814 0.848 - - - - 0.966 - - - Rho GTPase activating protein 29b [Source:ZFIN;Acc:ZDB-GENE-031010-44]
44. grk5 ENSDARG00000032801 490 1.809 - - - - - 0.866 0.943 - - G protein-coupled receptor kinase 5 [Source:ZFIN;Acc:ZDB-GENE-091204-274]
45. erh ENSDARG00000032866 20633 1.807 - - - - - 0.933 0.874 - - enhancer of rudimentary homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-990415-57]
46. tmem203 ENSDARG00000104996 1182 1.806 - - - - - 0.860 0.946 - - transmembrane protein 203 [Source:ZFIN;Acc:ZDB-GENE-040718-225]
47. frmd6 ENSDARG00000002332 2698 1.799 - - - - - 0.807 - 0.992 - FERM domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-050522-354]
48. wtap ENSDARG00000042642 1779 1.795 - - - - - 0.844 0.951 - - WT1 associated protein [Source:ZFIN;Acc:ZDB-GENE-030131-5990]
49. psmd7 ENSDARG00000102417 4732 1.794 - - - - - 0.907 0.887 - - proteasome 26S subunit, non-ATPase 7 [Source:ZFIN;Acc:ZDB-GENE-030131-5541]
50. CU929378.1 CU929378.1 514 1.79 0.849 - - - - - 0.941 - -
51. NBEAL1 ENSDARG00000099547 1112 1.779 - - - - - 0.844 0.935 - - neurobeachin-like 1 [Source:ZFIN;Acc:ZDB-GENE-130530-544]
52. rab2a ENSDARG00000020261 24540 1.777 - - - - - - 0.924 0.853 - RAB2A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-011212-2]
53. capza1a ENSDARG00000034240 24012 1.769 - - - - - - - 0.894 0.875 capping actin protein of muscle Z-line subunit alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5237]
54. srrm2 ENSDARG00000037965 1967 1.768 - 0.796 - - - - 0.972 - - serine/arginine repetitive matrix 2 [Source:ZFIN;Acc:ZDB-GENE-050522-399]
55. idh1 ENSDARG00000025375, ENSDARG00000112650, ENSDARG00000117104 6100 1.767 - - - - - 0.894 - 0.873 - isocitrate dehydrogenase 1 (NADP+), soluble [Source:ZFIN;Acc:ZDB-GENE-031006-1]
56. slc25a42 ENSDARG00000099368 2420 1.767 - - - - - 0.778 - 0.989 - solute carrier family 25, member 42 [Source:ZFIN;Acc:ZDB-GENE-060825-313]
57. PTS ENSDARG00000045269 2185 1.764 - - - - - 0.810 0.954 - - 6-pyruvoyltetrahydropterin synthase [Source:ZFIN;Acc:ZDB-GENE-070615-3]
58. mmp2 ENSDARG00000017676 2347 1.763 - 0.803 - - - - - 0.960 - matrix metallopeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9123]
59. FUCA1 FUCA1 1446 1.761 - - - - - 0.834 0.927 - -
60. prkcda ENSDARG00000009208 1508 1.76 - - - - - 0.894 0.866 - - protein kinase C, delta a [Source:ZFIN;Acc:ZDB-GENE-030131-6503]
61. sp3b ENSDARG00000007812 2928 1.756 - - - - - - 0.898 0.858 - Sp3b transcription factor [Source:ZFIN;Acc:ZDB-GENE-110815-3]
62. C24H8orf44 C24H8orf44 405 1.753 0.798 - - - - 0.955 - - -
63. adipor1b ENSDARG00000042717 1348 1.752 - - - - - 0.797 0.955 - - adiponectin receptor 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2896]
64. cbx5 ENSDARG00000061187 24026 1.746 - - - - - - - 0.849 0.897 chromobox homolog 5 (HP1 alpha homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5553]
65. gpx7 ENSDARG00000091511 3045 1.742 - - - - - 0.889 - 0.853 - glutathione peroxidase 7 [Source:ZFIN;Acc:ZDB-GENE-050522-419]
66. C13H4orf32 C13H4orf32 174 1.734 0.805 - - - - 0.929 - - -
67. laptm4a ENSDARG00000006397 1698 1.733 - - - - - 0.782 0.951 - - lysosomal protein transmembrane 4 alpha [Source:ZFIN;Acc:ZDB-GENE-030131-1024]
68. ef1 1343 1.723 - - - - - 0.819 0.904 - - E74-like factor 1 (ets domain transcription factor), transcript variant X4
69. DYNC1I2 DYNC1I2 4131 1.721 - 0.785 - - - - 0.936 - -
70. s100v1 ENSDARG00000070427 6633 1.718 - - - - - 0.883 - 0.835 - S100 calcium binding protein V1 [Source:ZFIN;Acc:ZDB-GENE-080407-1]
71. cebpg ENSDARG00000036073 3791 1.715 - - - - - 0.745 - 0.970 - CCAAT enhancer binding protein gamma [Source:ZFIN;Acc:ZDB-GENE-020111-5]
72. si:ch211-196l7.4 ENSDARG00000095451 3766 1.714 - 0.758 - - - - 0.956 - - si:ch211-196l7.4 [Source:ZFIN;Acc:ZDB-GENE-050419-122]
73. rpl4 ENSDARG00000041182 18655 1.714 - - - - - - - 0.758 0.956 ribosomal protein L4 [Source:ZFIN;Acc:ZDB-GENE-030131-9034]
74. prrx1a ENSDARG00000033971 1786 1.71 - 0.841 - - - 0.869 - - - paired related homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-020905-5]
75. wu:fc34e06 1793 1.707 - - - - - 0.776 0.931 - - wu:fc34e06, transcript variant X10
76. arhgdig ENSDARG00000004034 10368 1.707 - 0.739 - - - - - 0.968 - Rho GDP dissociation inhibitor (GDI) gamma [Source:ZFIN;Acc:ZDB-GENE-040426-1493]
77. EML4_1 EML4_1 8736 1.706 - - - - - - 0.900 0.806 -
78. CCDC64B CCDC64B 337 1.705 0.786 - - - - 0.919 - - -
79. lipin2 2021 1.705 - 0.716 - - - - - 0.989 - lipin 2, transcript variant X2
80. rab27a ENSDARG00000103935 1173 1.705 0.749 - - - - - 0.956 - - RAB27A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-050913-46]
81. fam89a ENSDARG00000079979 4375 1.704 - 0.770 - - - - - 0.934 - family with sequence similarity 89, member A [Source:ZFIN;Acc:ZDB-GENE-111019-1]
82. rab11al ENSDARG00000014340 2116 1.703 - - - - - 0.770 0.933 - - RAB11a, member RAS oncogene family, like [Source:ZFIN;Acc:ZDB-GENE-031118-188]
83. snx7 ENSDARG00000105185 2977 1.702 - 0.741 - - - - 0.961 - - sorting nexin 7 [Source:ZFIN;Acc:ZDB-GENE-040704-77]
84. col14a1a ENSDARG00000005762 4778 1.701 - 0.766 - - - - 0.935 - - collagen, type XIV, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9889]
85. kdm1a ENSDARG00000060679 6152 1.699 - 0.716 - - - - - - 0.983 lysine (K)-specific demethylase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7828]
86. myh14 ENSDARG00000073732 502 1.697 0.797 - - - - 0.900 - - - myosin, heavy chain 14, non-muscle [Source:ZFIN;Acc:ZDB-GENE-100921-1]
87. bckdk ENSDARG00000016904 3775 1.696 - 0.806 - - - 0.890 - - - branched chain ketoacid dehydrogenase kinase [Source:ZFIN;Acc:ZDB-GENE-021204-1]
88. purba ENSDARG00000068822 2537 1.69 - - - - - 0.719 0.971 - - purine-rich element binding protein Ba [Source:ZFIN;Acc:ZDB-GENE-060531-100]
89. ezrb ENSDARG00000025091 2861 1.69 - - - - - 0.718 - 0.972 - ezrin b [Source:ZFIN;Acc:ZDB-GENE-050803-1]
90. dlx4b ENSDARG00000071560 446 1.689 0.745 - - - - - 0.944 - - distal-less homeobox 4b [Source:ZFIN;Acc:ZDB-GENE-990415-50]
91. sigmar1 ENSDARG00000011418 1240 1.688 - - - - - 0.733 0.955 - - sigma non-opioid intracellular receptor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1006]
92. cope ENSDARG00000018562 17276 1.682 - - - - - 0.772 0.910 - - coatomer protein complex, subunit epsilon [Source:ZFIN;Acc:ZDB-GENE-041114-59]
93. dusp6 ENSDARG00000070914, ENSDARG00000116888 4473 1.678 - 0.714 - - - - - 0.964 - dual specificity phosphatase 6 [Source:ZFIN;Acc:ZDB-GENE-030613-1]
94. etnk1 ENSDARG00000019420 2166 1.675 - 0.743 - - - - 0.932 - - ethanolamine kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030328-21]
95. ap1s1 ENSDARG00000056803 3854 1.67 - 0.705 - - - - 0.965 - - adaptor related protein complex 1 subunit sigma 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1119]
96. h1fx ENSDARG00000054058 4075 1.66 - - - - - 0.727 - 0.933 - H1 histone family, member X [Source:ZFIN;Acc:ZDB-GENE-030131-1228]
97. bambib ENSDARG00000099677 4267 1.656 - 0.702 - - - - - 0.954 - BMP and activin membrane-bound inhibitor homolog (Xenopus laevis) b [Source:ZFIN;Acc:ZDB-GENE-040704-30]
98. nus1 ENSDARG00000027813 1417 1.655 - 0.730 - - - 0.925 - - - NUS1, dehydrodolichyl diphosphate synthase subunit [Source:ZFIN;Acc:ZDB-GENE-040718-48]
99. ARHGAP23 ARHGAP23 3946 1.651 0.709 - - - - - 0.942 - -
100. tmem56b ENSDARG00000098224 1524 1.649 - 0.743 - - - - 0.906 - - transmembrane protein 56b [Source:ZFIN;Acc:ZDB-GENE-041010-90]

There are 1720 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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