Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ubfd1

Gene Name Gene ID Reads Annotation
ubfd1 ENSDARG00000102827 966 ubiquitin family domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050506-90]










Genes with expression patterns similar to ubfd1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ubfd1 ENSDARG00000102827 966 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ubiquitin family domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050506-90]
2. GRK6 ENSDARG00000032157 1136 1.496 - 0.764 - - - - 0.732 - - G protein-coupled receptor kinase 6 [Source:ZFIN;Acc:ZDB-GENE-101006-5]
3. hmg20b ENSDARG00000042045, ENSDARG00000116536 2638 1.471 - - - 0.742 - 0.729 - - - high mobility group 20B [Source:ZFIN;Acc:ZDB-GENE-030131-4258]
4. crlf3 ENSDARG00000070261 904 1.418 - - - 0.711 - 0.707 - - - cytokine receptor-like factor 3 [Source:ZFIN;Acc:ZDB-GENE-050417-354]
5. XCR1_1 XCR1_1 187 0.92 - 0.920 - - - - - - -
6. SLC22A23 ENSDARG00000078856 2921 0.893 - 0.893 - - - - - - - solute carrier family 22, member 23 [Source:ZFIN;Acc:ZDB-GENE-030131-3564]
7. C20H6orf58 C20H6orf58 1105 0.89 - 0.890 - - - - - - -
8. fabp1b.1 ENSDARG00000059227 5670 0.885 - 0.885 - - - - - - - fatty acid binding protein 1b, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050522-96]
9. CNDP1 CNDP1 6456 0.879 - 0.879 - - - - - - -
10. zgc:162608 ENSDARG00000069375 2881 0.864 - 0.864 - - - - - - - zgc:162608 [Source:ZFIN;Acc:ZDB-GENE-070410-86]
11. lmod1 lmod1 409 0.862 - 0.862 - - - - - - -
12. fuca1 fuca1 6176 0.858 - 0.858 - - - - - - -
13. blmh ENSDARG00000025977 1011 0.856 - - - - - 0.856 - - - bleomycin hydrolase [Source:ZFIN;Acc:ZDB-GENE-030131-8485]
14. setd3 ENSDARG00000016513 1507 0.856 - - - - - 0.856 - - - SET domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9137]
15. cav2 ENSDARG00000052000 2516 0.853 - 0.853 - - - - - - - caveolin 2 [Source:ZFIN;Acc:ZDB-GENE-040625-164]
16. adrbk2 1037 0.851 - 0.851 - - - - - - - adrenergic, beta, receptor kinase 2, transcript variant X1
17. polr3k ENSDARG00000037835 1552 0.846 - - - - - 0.846 - - - polymerase (RNA) III (DNA directed) polypeptide K [Source:ZFIN;Acc:ZDB-GENE-040718-291]
18. twf1a ENSDARG00000115712 3465 0.846 - 0.846 - - - - - - - twinfilin actin-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4402]
19. c5 ENSDARG00000021004 3536 0.842 - 0.842 - - - - - - - complement component 5 [Source:ZFIN;Acc:ZDB-GENE-120510-2]
20. cpvl ENSDARG00000056480 2115 0.842 - 0.842 - - - - - - - carboxypeptidase, vitellogenic-like [Source:ZFIN;Acc:ZDB-GENE-031219-2]
21. prpf6 ENSDARG00000091367 1868 0.84 - 0.840 - - - - - - - PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-2575]
22. tmem238 tmem238 1403 0.838 - 0.838 - - - - - - -
23. coil ENSDARG00000040070 863 0.838 - - - - - 0.838 - - - coilin p80 [Source:ZFIN;Acc:ZDB-GENE-000330-8]
24. si:dkey-102c8.3 ENSDARG00000113572 4779 0.838 - 0.838 - - - - - - - si:dkey-102c8.3 [Source:ZFIN;Acc:ZDB-GENE-050208-328]
25. zgc:111983 ENSDARG00000006588 671 0.834 - 0.834 - - - - - - - zgc:111983 [Source:ZFIN;Acc:ZDB-GENE-050417-335]
26. tfap2c ENSDARG00000040606 4628 0.833 - 0.833 - - - - - - - transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma) [Source:ZFIN;Acc:ZDB-GENE-041212-61]
27. spns1 ENSDARG00000011925, ENSDARG00000111727 3126 0.832 - 0.832 - - - - - - - spinster homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-020228-1]
28. cldn1 ENSDARG00000040045 5304 0.831 - 0.831 - - - - - - - claudin 1 [Source:ZFIN;Acc:ZDB-GENE-010328-11]
29. CABZ01007794.1 CABZ01007794.1 14290 0.83 - 0.830 - - - - - - -
30. tkt tkt 7203 0.829 - 0.829 - - - - - - -
31. flrt2 ENSDARG00000079355, ENSDARG00000097299, ENSDARG00000116552 1464 0.828 - 0.828 - - - - - - - fibronectin leucine rich transmembrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-070705-267]
32. CR388095.3 CR388095.3 2548 0.828 - 0.828 - - - - - - -
33. grsf1 ENSDARG00000053021 2752 0.827 - - - - - 0.827 - - - G-rich RNA sequence binding factor 1 [Source:ZFIN;Acc:ZDB-GENE-060825-196]
34. lsm8 ENSDARG00000091656, ENSDARG00000111914 2751 0.827 - 0.827 - - - - - - - LSM8 homolog, U6 small nuclear RNA associated [Source:ZFIN;Acc:ZDB-GENE-070629-3]
35. nkx3-1 ENSDARG00000078280 1205 0.826 - - - - - 0.826 - - - NK3 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-081104-238]
36. acot11a ENSDARG00000058229 531 0.825 - 0.825 - - - - - - - acyl-CoA thioesterase 11a [Source:ZFIN;Acc:ZDB-GENE-050522-538]
37. emc10 ENSDARG00000054793 2315 0.825 - 0.825 - - - - - - - ER membrane protein complex subunit 10 [Source:ZFIN;Acc:ZDB-GENE-030131-9045]
38. ost4 ENSDARG00000096118 7679 0.823 - 0.823 - - - - - - - oligosaccharyltransferase complex subunit 4 (non-catalytic) [Source:ZFIN;Acc:ZDB-GENE-110307-1]
39. neu1 ENSDARG00000008832 2848 0.823 - 0.823 - - - - - - - neuraminidase 1 [Source:ZFIN;Acc:ZDB-GENE-060503-592]
40. rpl3 ENSDARG00000003599 797 0.819 - - - 0.819 - - - - - ribosomal protein L3 [Source:ZFIN;Acc:ZDB-GENE-030131-1291]
41. ccnb1 ENSDARG00000051923 3226 0.819 - 0.819 - - - - - - - cyclin B1 [Source:ZFIN;Acc:ZDB-GENE-000406-10]
42. syvn1 ENSDARG00000017842 1815 0.818 - 0.818 - - - - - - - synovial apoptosis inhibitor 1, synoviolin [Source:ZFIN;Acc:ZDB-GENE-030131-7166]
43. serpinf2b ENSDARG00000061383 3859 0.817 - 0.817 - - - - - - - serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 2b [Source:ZFIN;Acc:ZDB-GENE-061215-114]
44. si:ch211-202f5.3 ENSDARG00000092998 1388 0.816 - 0.816 - - - - - - - si:ch211-202f5.3 [Source:ZFIN;Acc:ZDB-GENE-030131-1042]
45. mmp14a ENSDARG00000002235 911 0.816 - - - - - 0.816 - - - matrix metallopeptidase 14a (membrane-inserted) [Source:ZFIN;Acc:ZDB-GENE-030901-1]
46. ptgdsa ENSDARG00000069439, ENSDARG00000109669 289 0.814 - 0.814 - - - - - - - prostaglandin D2 synthase a [Source:ZFIN;Acc:ZDB-GENE-081022-118]
47. sfxn1 ENSDARG00000019963 1689 0.813 - 0.813 - - - - - - - sideroflexin 1 [Source:ZFIN;Acc:ZDB-GENE-040801-45]
48. snai1a ENSDARG00000056995 1427 0.813 - 0.813 - - - - - - - snail family zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-990415-255]
49. TCAIM ENSDARG00000079881 424 0.812 - - - - - 0.812 - - - T cell activation inhibitor, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-160113-67]
50. dctn4 ENSDARG00000023988 860 0.811 - 0.811 - - - - - - - dynactin 4 [Source:ZFIN;Acc:ZDB-GENE-050417-306]
51. CCDC61 ENSDARG00000062307 582 0.81 - - - 0.810 - - - - - coiled-coil domain containing 61 [Source:ZFIN;Acc:ZDB-GENE-060929-348]
52. osbpl2b ENSDARG00000013830, ENSDARG00000114103 393 0.81 - 0.810 - - - - - - - oxysterol binding protein-like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-6138]
53. suco ENSDARG00000016532 1609 0.809 - 0.809 - - - - - - - SUN domain containing ossification factor [Source:ZFIN;Acc:ZDB-GENE-030131-2941]
54. zgc:110239 ENSDARG00000077664 7015 0.809 - 0.809 - - - - - - - zgc:110239 [Source:ZFIN;Acc:ZDB-GENE-050417-107]
55. ckmt1 ENSDARG00000016598, ENSDARG00000113143 15024 0.808 - 0.808 - - - - - - - creatine kinase, mitochondrial 1 [Source:ZFIN;Acc:ZDB-GENE-030131-611]
56. TMEM261 TMEM261 6529 0.808 - 0.808 - - - - - - -
57. CYTH2 ENSDARG00000028800 2349 0.808 - 0.808 - - - - - - - cytohesin 2 [Source:HGNC Symbol;Acc:HGNC:9502]
58. XPR1 XPR1 3354 0.806 - 0.806 - - - - - - -
59. si:ch211-241b2.1 ENSDARG00000102950 526 0.806 - 0.806 - - - - - - - si:ch211-241b2.1 [Source:ZFIN;Acc:ZDB-GENE-070705-131]
60. aim1a 2981 0.806 - 0.806 - - - - - - - crystallin beta-gamma domain containing 1a, transcript variant X1
61. reep5 ENSDARG00000100742 1470 0.804 - 0.804 - - - - - - - receptor accessory protein 5 [Source:ZFIN;Acc:ZDB-GENE-030131-9181]
62. C3H17orf75 C3H17orf75 432 0.804 - - - 0.804 - - - - -
63. nedd8 ENSDARG00000007989 3896 0.803 - 0.803 - - - - - - - neural precursor cell expressed, developmentally down-regulated 8 [Source:ZFIN;Acc:ZDB-GENE-030616-588]
64. nat15 ENSDARG00000061185 396 0.803 - 0.803 - - - - - - - N-acetyltransferase 15 (GCN5-related, putative) [Source:ZFIN;Acc:ZDB-GENE-041111-143]
65. RALGAPB ENSDARG00000088899 1456 0.803 - - - - - - 0.803 - - Ral GTPase activating protein, beta subunit (non-catalytic) [Source:ZFIN;Acc:ZDB-GENE-130530-945]
66. rnf14 ENSDARG00000043905 862 0.802 - - - - - 0.802 - - - ring finger protein 14 [Source:ZFIN;Acc:ZDB-GENE-040625-65]
67. zgc:161979_1 zgc:161979_1 206500 0.802 - 0.802 - - - - - - -
68. ostm1 ENSDARG00000069808 1024 0.801 - 0.801 - - - - - - - osteopetrosis associated transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-081104-270]
69. exoc5 ENSDARG00000060323 2450 0.801 - 0.801 - - - - - - - exocyst complex component 5 [Source:ZFIN;Acc:ZDB-GENE-080204-126]
70. pdrg1 ENSDARG00000045017 628 0.8 - - - 0.800 - - - - - p53 and DNA-damage regulated 1 [Source:ZFIN;Acc:ZDB-GENE-050417-276]
71. rpn1 ENSDARG00000059323 10411 0.8 - 0.800 - - - - - - - ribophorin I [Source:ZFIN;Acc:ZDB-GENE-030131-4286]
72. PLCXD1_4 PLCXD1_4 3673 0.799 - 0.799 - - - - - - -
73. nadka_1 ENSDARG00000006577, ENSDARG00000098313 544 0.799 - 0.799 - - - - - - - NAD kinase a [Source:ZFIN;Acc:ZDB-GENE-050417-39]
74. optn ENSDARG00000002663, ENSDARG00000111364 1440 0.799 - 0.799 - - - - - - - optineurin [Source:ZFIN;Acc:ZDB-GENE-030131-8103]
75. lamtor3 ENSDARG00000057075 2282 0.797 - 0.797 - - - - - - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 [Source:ZFIN;Acc:ZDB-GENE-050522-345]
76. CU467854.1 CU467854.1 228 0.797 - 0.797 - - - - - - -
77. CR391977.3 CR391977.3 76 0.796 - 0.796 - - - - - - -
78. smc2 ENSDARG00000017744, ENSDARG00000114076 2271 0.796 - 0.796 - - - - - - - structural maintenance of chromosomes 2 [Source:ZFIN;Acc:ZDB-GENE-030131-105]
79. gm2a ENSDARG00000088439 5387 0.795 - 0.795 - - - - - - - GM2 ganglioside activator [Source:ZFIN;Acc:ZDB-GENE-050417-373]
80. nucb1 ENSDARG00000054833 2009 0.794 - 0.794 - - - - - - - nucleobindin 1 [Source:ZFIN;Acc:ZDB-GENE-060825-222]
81. lrpprc ENSDARG00000043970 3847 0.794 - - - - - 0.794 - - - leucine-rich pentatricopeptide repeat containing [Source:ZFIN;Acc:ZDB-GENE-030131-7887]
82. twsg1a ENSDARG00000104244 622 0.793 - - - - - - 0.793 - - twisted gastrulation BMP signaling modulator 1a [Source:ZFIN;Acc:ZDB-GENE-010509-2]
83. tmem126a ENSDARG00000014506 1050 0.793 - 0.793 - - - - - - - transmembrane protein 126A [Source:ZFIN;Acc:ZDB-GENE-040426-1770]
84. nme6 ENSDARG00000016138 207 0.793 - - - - - 0.793 - - - NME/NM23 nucleoside diphosphate kinase 6 [Source:ZFIN;Acc:ZDB-GENE-000710-3]
85. gnpda1 ENSDARG00000037307, ENSDARG00000109317, ENSDARG00000114846 2191 0.792 - 0.792 - - - - - - - glucosamine-6-phosphate deaminase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-417]
86. ENSDARG00000058255 ENSDARG00000058255 1715 0.791 - - - 0.791 - - - - -
87. ube2d1a ENSDARG00000029107, ENSDARG00000111656 3658 0.789 - 0.789 - - - - - - - ubiquitin-conjugating enzyme E2D 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1609]
88. efhd2 ENSDARG00000055759 7777 0.789 - 0.789 - - - - - - - EF-hand domain family, member D2 [Source:ZFIN;Acc:ZDB-GENE-060531-152]
89. trim16 ENSDARG00000010673 519 0.788 - 0.788 - - - - - - - tripartite motif containing 16 [Source:ZFIN;Acc:ZDB-GENE-090512-6]
90. lamtor5 ENSDARG00000090194, ENSDARG00000115255 2539 0.787 - 0.787 - - - - - - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 [Source:ZFIN;Acc:ZDB-GENE-110411-193]
91. snap25b ENSDARG00000058117 469 0.787 - - - 0.787 - - - - - synaptosomal-associated protein, 25b [Source:ZFIN;Acc:ZDB-GENE-980526-392]
92. tfr1b_1 ENSDARG00000077372, ENSDARG00000112880 343 0.787 - - - - - 0.787 - - - transferrin receptor 1b [Source:ZFIN;Acc:ZDB-GENE-041220-2]
93. bag4 ENSDARG00000043179 568 0.786 - - - - - 0.786 - - - BCL2 associated athanogene 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5484]
94. pdxdc1 ENSDARG00000101886 1958 0.784 - 0.784 - - - - - - - pyridoxal-dependent decarboxylase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040912-16]
95. entpd6 ENSDARG00000008757, ENSDARG00000111982 1397 0.783 - 0.783 - - - - - - - ectonucleoside triphosphate diphosphohydrolase 6 (putative) [Source:ZFIN;Acc:ZDB-GENE-050417-412]
96. zgc:66447 ENSDARG00000025577, ENSDARG00000111229 744 0.782 - 0.782 - - - - - - - zgc:66447 [Source:ZFIN;Acc:ZDB-GENE-030131-4748]
97. pcyt1aa ENSDARG00000011233 1985 0.782 - - - - - 0.782 - - - phosphate cytidylyltransferase 1, choline, alpha a [Source:ZFIN;Acc:ZDB-GENE-050417-108]
98. lamp2 ENSDARG00000014914 5035 0.781 - 0.781 - - - - - - - lysosomal-associated membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-030729-9]
99. ATOX1 ENSDARG00000087693 4016 0.78 - 0.780 - - - - - - - antioxidant 1 copper chaperone [Source:ZFIN;Acc:ZDB-GENE-120720-2]
100. zgc:113442 ENSDARG00000101906 3092 0.78 - 0.780 - - - - - - - zgc:113442 [Source:ZFIN;Acc:ZDB-GENE-050227-2]

There are 318 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA