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Results for ube4b

Gene Name Gene ID Reads Annotation
ube4b ENSDARG00000037017 8012 ubiquitination factor E4B, UFD2 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-020205-1]










Genes with expression patterns similar to ube4b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ube4b ENSDARG00000037017 8012 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ubiquitination factor E4B, UFD2 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-020205-1]
2. pbx2 ENSDARG00000019717 6892 3.227 0.709 - 0.867 - - - 0.810 0.841 - pre-B-cell leukemia homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-000405-5]
3. lima1 lima1 4760 2.554 - - 0.947 - 0.897 - - - 0.710
4. acadvl ENSDARG00000016687 5329 2.542 - - 0.950 - 0.810 - 0.782 - - acyl-CoA dehydrogenase very long chain [Source:ZFIN;Acc:ZDB-GENE-030131-899]
5. psmb6 ENSDARG00000002240 8015 2.481 0.826 - - - 0.903 - - - 0.752 proteasome subunit beta 6 [Source:ZFIN;Acc:ZDB-GENE-990415-216]
6. lypla2 ENSDARG00000053656 8971 2.378 - - 0.860 - - - 0.746 - 0.772 lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
7. ube2g1a ENSDARG00000015292, ENSDARG00000112281 3207 2.35 - - - - 0.877 0.752 0.721 - - ubiquitin-conjugating enzyme E2G 1a (UBC7 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-6065]
8. arid4a ENSDARG00000043873 4176 2.327 - - - - - 0.840 0.739 - 0.748 AT rich interactive domain 4A (RBP1-like) [Source:ZFIN;Acc:ZDB-GENE-050809-105]
9. nr2f6b ENSDARG00000003165 5855 2.243 - - - 0.705 - 0.767 0.771 - - nuclear receptor subfamily 2, group F, member 6b [Source:ZFIN;Acc:ZDB-GENE-040426-2351]
10. SNRPG ENSDARG00000099667 18697 2.194 - - - 0.708 - - 0.763 - 0.723 small nuclear ribonucleoprotein polypeptide G [Source:ZFIN;Acc:ZDB-GENE-040912-105]
11. lin54 ENSDARG00000063194 2583 1.865 - - 0.971 - 0.894 - - - - lin-54 DREAM MuvB core complex component [Source:ZFIN;Acc:ZDB-GENE-060929-440]
12. DLC1 ENSDARG00000079317 2149 1.851 - - 0.967 - 0.884 - - - - DLC1 Rho GTPase activating protein [Source:ZFIN;Acc:ZDB-GENE-130206-12]
13. dbr1 ENSDARG00000056923, ENSDARG00000116603 2196 1.848 - - 0.976 - 0.872 - - - - debranching RNA lariats 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2466]
14. hexim1 ENSDARG00000036482 4317 1.845 - - 0.950 - 0.895 - - - - hexamethylene bis-acetamide inducible 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4637]
15. TUBB8P7_1 TUBB8P7_1 2722 1.834 - - 0.957 - 0.877 - - - -
16. tmem50a ENSDARG00000015757 3244 1.834 - - 0.970 - 0.864 - - - - transmembrane protein 50A [Source:ZFIN;Acc:ZDB-GENE-040426-2937]
17. atg4a ENSDARG00000014531 481 1.832 - - 0.973 0.859 - - - - - autophagy related 4A, cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-050522-430]
18. eng1b eng1b 2544 1.831 - - 0.952 - 0.879 - - - -
19. axin2 ENSDARG00000100149 4223 1.818 - - 0.963 - 0.855 - - - - axin 2 (conductin, axil) [Source:ZFIN;Acc:ZDB-GENE-000403-2]
20. HDX ENSDARG00000079382 513 1.818 - - 0.975 0.843 - - - - - highly divergent homeobox [Source:ZFIN;Acc:ZDB-GENE-140106-165]
21. tmem2 2572 1.812 - - 0.969 - - - 0.843 - - transmembrane protein 2, transcript variant X1
22. rnf10 ENSDARG00000079687 6768 1.794 - - 0.926 - - - 0.868 - - ring finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-030131-2969]
23. rapgef2 ENSDARG00000005482 2586 1.778 - - 0.978 - - - - 0.800 - Rap guanine nucleotide exchange factor (GEF) 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6959]
24. emp2 ENSDARG00000044588 12560 1.755 - 0.968 - - - - 0.787 - - epithelial membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-040822-24]
25. msxe msxe 362 1.753 - - - 0.877 0.876 - - - -
26. srebf2 ENSDARG00000063438 1982 1.751 - - 0.983 - - 0.768 - - - sterol regulatory element binding transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-070410-8]
27. mdh1a mdh1a 11035 1.743 - - 0.937 - 0.806 - - - -
28. gclc ENSDARG00000013095 2146 1.73 - - - 0.871 0.859 - - - - glutamate-cysteine ligase, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-030131-5056]
29. rpl7l1 ENSDARG00000042864 3256 1.724 - - 0.942 - 0.782 - - - - ribosomal protein L7-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-970]
30. fbxl14a ENSDARG00000034497, ENSDARG00000110327 3132 1.722 - - - - 0.916 0.806 - - - F-box and leucine-rich repeat protein 14a [Source:ZFIN;Acc:ZDB-GENE-030131-5920]
31. C10H11orf30 C10H11orf30 1982 1.722 - - 0.977 - - - 0.745 - -
32. dvl3a ENSDARG00000015707 1132 1.717 - - - - 0.872 0.845 - - - dishevelled segment polarity protein 3a [Source:ZFIN;Acc:ZDB-GENE-010319-1]
33. pdpk1b ENSDARG00000018285 957 1.717 - - - 0.838 0.879 - - - - 3-phosphoinositide dependent protein kinase 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1820]
34. SON SON 510 1.712 - - 0.979 - - 0.733 - - -
35. nckap1 ENSDARG00000060853 3540 1.712 - - - - 0.876 0.836 - - - NCK-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4426]
36. hist2h2l ENSDARG00000068996, ENSDARG00000112150 10411 1.701 - - 0.851 - - - 0.850 - - histone 2, H2, like [Source:ZFIN;Acc:ZDB-GENE-031118-36]
37. ahcyl1 ENSDARG00000056331 1765 1.692 - - 0.943 - - 0.749 - - - adenosylhomocysteinase-like 1 [Source:ZFIN;Acc:ZDB-GENE-021206-7]
38. ubl3b ENSDARG00000021556 1210 1.691 - - 0.971 - - 0.720 - - - ubiquitin-like 3b [Source:ZFIN;Acc:ZDB-GENE-040630-4]
39. pnisr ENSDARG00000069855, ENSDARG00000116449 3465 1.69 - - 0.961 - - - 0.729 - - PNN-interacting serine/arginine-rich protein [Source:ZFIN;Acc:ZDB-GENE-030131-362]
40. psmc5 ENSDARG00000015315 8458 1.685 - - - - 0.916 - 0.769 - - proteasome 26S subunit, ATPase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6547]
41. smurf1 ENSDARG00000016086 878 1.682 - - - - 0.876 0.806 - - - SMAD specific E3 ubiquitin protein ligase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2744]
42. dut ENSDARG00000106529 3120 1.682 - - 0.913 - - - - - 0.769 deoxyuridine triphosphatase [Source:ZFIN;Acc:ZDB-GENE-041010-93]
43. sltm ENSDARG00000052728 6234 1.676 - - 0.965 - - - 0.711 - - SAFB-like, transcription modulator [Source:ZFIN;Acc:ZDB-GENE-040426-2647]
44. zgc:63637 zgc:63637 3636 1.674 - - - 0.875 - - 0.799 - -
45. GRAMD4 GRAMD4 1967 1.665 - - - - 0.896 0.769 - - -
46. C1H7orf55 C1H7orf55 2552 1.659 - - - 0.802 0.857 - - - -
47. fam134c fam134c 1550 1.659 - - - - 0.889 0.770 - - -
48. sdc4 ENSDARG00000059906 10105 1.657 - - 0.901 - - - 0.756 - - syndecan 4 [Source:ZFIN;Acc:ZDB-GENE-061111-1]
49. snx12 ENSDARG00000019060 9563 1.656 - - 0.940 - - - 0.716 - - sorting nexin 12 [Source:ZFIN;Acc:ZDB-GENE-040426-787]
50. snrpd2 ENSDARG00000040440, ENSDARG00000110285 4301 1.653 - - - - - 0.828 0.825 - - small nuclear ribonucleoprotein D2 polypeptide [Source:ZFIN;Acc:ZDB-GENE-040914-10]
51. pum1 ENSDARG00000099256 5017 1.637 - - 0.897 - - - 0.740 - - pumilio RNA-binding family member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2074]
52. brms1la ENSDARG00000006235 2011 1.636 - - - 0.754 0.882 - - - - BRMS1 like transcriptional repressor a [Source:ZFIN;Acc:ZDB-GENE-050913-49]
53. mlf2 ENSDARG00000034616, ENSDARG00000110660 14039 1.634 - - - - 0.893 - 0.741 - - myeloid leukemia factor 2 [Source:ZFIN;Acc:ZDB-GENE-050913-67]
54. kif22 ENSDARG00000102624 3694 1.634 - - - - 0.862 - 0.772 - - kinesin family member 22 [Source:ZFIN;Acc:ZDB-GENE-080204-34]
55. psmd1 ENSDARG00000003189 4373 1.631 - - - - - 0.899 - - 0.732 proteasome 26S subunit, non-ATPase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-810]
56. pias4a ENSDARG00000007081 4264 1.63 - - - - 0.898 - 0.732 - - protein inhibitor of activated STAT, 4a [Source:ZFIN;Acc:ZDB-GENE-040426-2734]
57. ssbp4 ENSDARG00000056483 10196 1.63 - - 0.919 - - - 0.711 - - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
58. drg1 ENSDARG00000039345 7545 1.628 - - 0.829 - - - 0.799 - - developmentally regulated GTP binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8767]
59. ypel5 ENSDARG00000088929 1011 1.627 - - - - 0.868 0.759 - - - yippee-like 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1220]
60. nr2f1a ENSDARG00000052695 5037 1.625 - - 0.872 - 0.753 - - - - nuclear receptor subfamily 2, group F, member 1a [Source:ZFIN;Acc:ZDB-GENE-980526-115]
61. nxf1 ENSDARG00000055076 3251 1.622 - 0.729 - - 0.893 - - - - nuclear RNA export factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2585]
62. eif3m ENSDARG00000013931 8117 1.621 - - 0.835 - 0.786 - - - - eukaryotic translation initiation factor 3, subunit M [Source:ZFIN;Acc:ZDB-GENE-040426-2643]
63. timm17a ENSDARG00000029510, ENSDARG00000115486 4295 1.618 - 0.732 - - 0.886 - - - - translocase of inner mitochondrial membrane 17 homolog A (yeast) [Source:ZFIN;Acc:ZDB-GENE-031030-6]
64. MKI67 ENSDARG00000091150 11038 1.617 - - - - - - 0.790 - 0.827 marker of proliferation Ki-67 [Source:ZFIN;Acc:ZDB-GENE-030131-9771]
65. naa15a ENSDARG00000003213 5889 1.615 - - - - 0.885 - 0.730 - - N(alpha)-acetyltransferase 15, NatA auxiliary subunit a [Source:ZFIN;Acc:ZDB-GENE-030131-2392]
66. ythdc1 ENSDARG00000051953, ENSDARG00000114892 4752 1.614 - - - - - 0.809 - - 0.805 YTH domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041114-114]
67. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 1.614 - - - - 0.910 - - - 0.704 dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
68. baxa ENSDARG00000020623, ENSDARG00000089129 2611 1.613 - - 0.875 - - 0.738 - - - BCL2 associated X, apoptosis regulator a [Source:ZFIN;Acc:ZDB-GENE-000511-6]
69. htatip htatip 1553 1.602 - - - - 0.872 0.730 - - -
70. arrdc1b ENSDARG00000079839 236 1.602 - - - 0.879 - 0.723 - - - arrestin domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-080515-2]
71. mrps15 ENSDARG00000109289 3258 1.6 - - - - 0.883 - 0.717 - - mitochondrial ribosomal protein S15 [Source:ZFIN;Acc:ZDB-GENE-040718-188]
72. med14 ENSDARG00000009953 1383 1.598 - - - - 0.893 - - - 0.705 mediator complex subunit 14 [Source:ZFIN;Acc:ZDB-GENE-030131-8867]
73. upf3b ENSDARG00000000489, ENSDARG00000116719 2088 1.597 - - 0.891 0.706 - - - - - UPF3B, regulator of nonsense mediated mRNA decay [Source:ZFIN;Acc:ZDB-GENE-040426-1630]
74. btg1 ENSDARG00000027249 32390 1.596 - 0.860 - - - 0.736 - - - B-cell translocation gene 1, anti-proliferative [Source:ZFIN;Acc:ZDB-GENE-010726-1]
75. ppp1cbl ENSDARG00000102012 2301 1.595 - - - - 0.887 - 0.708 - - protein phosphatase 1, catalytic subunit, beta isoform, like [Source:ZFIN;Acc:ZDB-GENE-030131-6529]
76. vgll4b ENSDARG00000103730 5266 1.594 - - - - - 0.806 0.788 - - vestigial-like family member 4b [Source:ZFIN;Acc:ZDB-GENE-040426-2445]
77. eif4h ENSDARG00000042252 6742 1.591 - - 0.845 - - - 0.746 - - eukaryotic translation initiation factor 4h [Source:ZFIN;Acc:ZDB-GENE-010328-19]
78. POLD4 POLD4 626 1.589 - - - 0.818 - 0.771 - - -
79. uchl5 ENSDARG00000103404, ENSDARG00000110434 4029 1.587 - - 0.884 - - - 0.703 - - ubiquitin carboxyl-terminal hydrolase L5 [Source:ZFIN;Acc:ZDB-GENE-040426-2051]
80. cetn3 ENSDARG00000011825 1087 1.586 - - - 0.869 - 0.717 - - - centrin 3 [Source:ZFIN;Acc:ZDB-GENE-050522-152]
81. lsm14ab ENSDARG00000100553 3837 1.586 - - - - 0.878 0.708 - - - LSM14A mRNA processing body assembly factor b [Source:ZFIN;Acc:ZDB-GENE-040426-2462]
82. supt6h ENSDARG00000006524 3221 1.585 - - - - 0.884 - - - 0.701 SPT6 homolog, histone chaperone [Source:ZFIN;Acc:ZDB-GENE-030131-7949]
83. loxl2b ENSDARG00000044074 1919 1.583 - - - - 0.874 0.709 - - - lysyl oxidase-like 2b [Source:ZFIN;Acc:ZDB-GENE-050208-29]
84. G3BP2 ENSDARG00000014790 9380 1.583 - - - - 0.850 0.733 - - - GTPase activating protein (SH3 domain) binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1972]
85. anp32e ENSDARG00000054804 11017 1.58 - - 0.786 - - - 0.794 - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member E [Source:ZFIN;Acc:ZDB-GENE-040426-2448]
86. fen1 ENSDARG00000011404 3358 1.58 - - - - 0.870 - - - 0.710 flap structure-specific endonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-031112-11]
87. msi1 ENSDARG00000010710 2634 1.576 - - - 0.785 0.791 - - - - musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
88. hnrpl 6412 1.572 - - - - - - 0.773 - 0.799 heterogeneous nuclear ribonucleoprotein L, transcript variant X1
89. pfdn4 ENSDARG00000061228 8266 1.571 - - 0.827 - - - 0.744 - - prefoldin subunit 4 [Source:ZFIN;Acc:ZDB-GENE-100922-122]
90. ppp1caa ENSDARG00000003486, ENSDARG00000115977 5931 1.569 - - - - - - 0.722 - 0.847 protein phosphatase 1, catalytic subunit, alpha isozyme a [Source:ZFIN;Acc:ZDB-GENE-040516-3]
91. shfm1 7620 1.569 - - 0.860 - - - 0.709 - - split hand/foot malformation (ectrodactyly) type 1
92. greb1l ENSDARG00000039196 2085 1.568 - - - 0.801 - 0.767 - - - GREB1 like retinoic acid receptor coactivator [Source:ZFIN;Acc:ZDB-GENE-030131-4022]
93. ppp2r1a ppp2r1a 11291 1.568 - - - - - - 0.834 - 0.734
94. saal1 ENSDARG00000018681, ENSDARG00000109471 480 1.567 - - - 0.852 - 0.715 - - - serum amyloid A-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-725]
95. TNRC6A ENSDARG00000079688 14433 1.567 - - - - - 0.748 0.819 - - trinucleotide repeat containing 6a [Source:ZFIN;Acc:ZDB-GENE-030131-2519]
96. Sep-15 Sep-15 5644 1.566 - - - - 0.837 - 0.729 - -
97. usp9 ENSDARG00000013708 9057 1.563 - - - - - 0.771 0.792 - - ubiquitin specific peptidase 9 [Source:ZFIN;Acc:ZDB-GENE-061019-1]
98. atp2b4 5891 1.563 - - 0.845 - - - 0.718 - - ATPase, Ca++ transporting, plasma membrane 4
99. SYDE2 ENSDARG00000099479 1891 1.56 - - - - - 0.803 0.757 - - synapse defective Rho GTPase homolog 2 [Source:HGNC Symbol;Acc:HGNC:25841]
100. lbr ENSDARG00000014013 4835 1.559 - - - - - - 0.775 0.784 - lamin B receptor [Source:ZFIN;Acc:ZDB-GENE-030804-11]

There are 1554 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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