Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ube4a

Gene Name Gene ID Reads Annotation
ube4a ENSDARG00000040571 172 ubiquitination factor E4A (UFD2 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-070410-21]










Genes with expression patterns similar to ube4a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ube4a ENSDARG00000040571 172 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ubiquitination factor E4A (UFD2 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-070410-21]
2. si:dkey-183c16.7 si:dkey-183c16.7 217 1.608 - - - - - 0.872 - 0.736 -
3. si:dkey-71b5.9 si:dkey-71b5.9 398 1.576 0.866 0.710 - - - - - - -
4. cep97 ENSDARG00000102407 1154 1.572 - 0.857 - - - - - 0.715 - centrosomal protein 97 [Source:ZFIN;Acc:ZDB-GENE-031030-11]
5. CABZ01083834.1 CABZ01083834.1 38 1.558 0.734 - - - - - - 0.824 -
6. dnajb9b ENSDARG00000016886 270 1.552 - 0.736 - - - 0.816 - - - DnaJ (Hsp40) homolog, subfamily B, member 9b [Source:ZFIN;Acc:ZDB-GENE-050522-76]
7. PARP4 ENSDARG00000069934 70 1.543 0.747 - - - - - - 0.796 - poly (ADP-ribose) polymerase family, member 4 [Source:ZFIN;Acc:ZDB-GENE-070912-387]
8. mfsd6a ENSDARG00000032318 228 1.531 - 0.749 - - - - - 0.782 - major facilitator superfamily domain containing 6a [Source:ZFIN;Acc:ZDB-GENE-050208-335]
9. si:dkey-154p10.3 ENSDARG00000068366 153 1.53 0.766 - - - - 0.764 - - - si:dkey-154p10.3 [Source:ZFIN;Acc:ZDB-GENE-070912-380]
10. zgc:153911 ENSDARG00000002509 110 1.515 - 0.804 - - - 0.711 - - - zgc:153911 [Source:ZFIN;Acc:ZDB-GENE-061013-174]
11. rbm45 ENSDARG00000063731 504 1.51 - 0.788 - - - 0.722 - - - RNA binding motif protein 45 [Source:ZFIN;Acc:ZDB-GENE-070122-4]
12. CABZ01057951.1 CABZ01057951.1 10 1.49 0.747 - - - 0.743 - - - -
13. CU855953.1 CU855953.1 137 1.481 0.747 0.734 - - - - - - -
14. elavl2 ENSDARG00000040732 44 1.475 0.747 0.728 - - - - - - - ELAV like neuron-specific RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040704-9]
15. zgc:77816 zgc:77816 800 1.461 0.759 - - - - - - 0.702 -
16. klhdc8b ENSDARG00000090787 33 1.447 - 0.728 - - 0.719 - - - - kelch domain containing 8B [Source:ZFIN;Acc:ZDB-GENE-090313-174]
17. sult1st5 ENSDARG00000003475, ENSDARG00000111502 34 1.409 - - - - - 0.706 - 0.703 - sulfotransferase family 1, cytosolic sulfotransferase 5 [Source:ZFIN;Acc:ZDB-GENE-050809-2]
18. slc15a4 ENSDARG00000102612 1096 0.932 - 0.932 - - - - - - - solute carrier family 15 (oligopeptide transporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1047]
19. pigh ENSDARG00000038348 405 0.909 - 0.909 - - - - - - - phosphatidylinositol glycan anchor biosynthesis, class H [Source:ZFIN;Acc:ZDB-GENE-040718-303]
20. rraga ENSDARG00000104149 515 0.906 - 0.906 - - - - - - - Ras-related GTP binding A [Source:ZFIN;Acc:ZDB-GENE-030131-4083]
21. mapk8ip3 ENSDARG00000062531 631 0.902 - 0.902 - - - - - - - mitogen-activated protein kinase 8 interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-090303-6]
22. f5 ENSDARG00000055705 973 0.893 - 0.893 - - - - - - - coagulation factor V [Source:ZFIN;Acc:ZDB-GENE-030131-5531]
23. rfxap ENSDARG00000076891 1299 0.892 - 0.892 - - - - - - - regulatory factor X-associated protein [Source:ZFIN;Acc:ZDB-GENE-091204-321]
24. wdr47b ENSDARG00000099757 93 0.89 - 0.890 - - - - - - - WD repeat domain 47b [Source:ZFIN;Acc:ZDB-GENE-121114-10]
25. CR626962.1 ENSDARG00000096981 220 0.888 - 0.888 - - - - - - -
26. ostf1 ENSDARG00000091555, ENSDARG00000114550 582 0.886 - 0.886 - - - - - - - osteoclast stimulating factor 1 [Source:ZFIN;Acc:ZDB-GENE-040625-157]
27. derl2 ENSDARG00000042401 863 0.884 - 0.884 - - - - - - - derlin 2 [Source:ZFIN;Acc:ZDB-GENE-050522-90]
28. sec22c ENSDARG00000063387 203 0.875 - 0.875 - - - - - - - SEC22 homolog C, vesicle trafficking protein [Source:ZFIN;Acc:ZDB-GENE-060227-2]
29. CABZ01074081.1 CABZ01074081.1 109 0.869 - 0.869 - - - - - - -
30. GATC ENSDARG00000056855 551 0.868 - 0.868 - - - - - - - glutamyl-tRNA amidotransferase subunit C [Source:ZFIN;Acc:ZDB-GENE-060526-381]
31. psmd3 ENSDARG00000018124 540 0.866 - 0.866 - - - - - - - proteasome 26S subunit, non-ATPase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1444]
32. cited4b ENSDARG00000101009, ENSDARG00000114241 3632 0.865 - 0.865 - - - - - - - Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4b [Source:ZFIN;Acc:ZDB-GENE-030425-5]
33. rbm18 ENSDARG00000044255, ENSDARG00000111311 589 0.862 - 0.862 - - - - - - - RNA binding motif protein 18 [Source:ZFIN;Acc:ZDB-GENE-040426-1764]
34. osr1 ENSDARG00000014091 770 0.861 - 0.861 - - - - - - - odd-skipped related transciption factor 1 [Source:ZFIN;Acc:ZDB-GENE-070321-1]
35. cutc ENSDARG00000077306, ENSDARG00000113409 238 0.86 - 0.860 - - - - - - - cutC copper transporter homolog (E. coli) [Source:ZFIN;Acc:ZDB-GENE-041010-144]
36. sacs ENSDARG00000091042 314 0.859 - - - - - - - 0.859 - sacsin molecular chaperone [Source:ZFIN;Acc:ZDB-GENE-110411-146]
37. TANC1 TANC1 795 0.856 - 0.856 - - - - - - -
38. lin7c ENSDARG00000027322 3083 0.856 - 0.856 - - - - - - - lin-7 homolog C (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-041011-2]
39. ICT1 356 0.856 0.856 - - - - - - - - immature colon carcinoma transcript 1
40. polr1c ENSDARG00000039400 606 0.855 - 0.855 - - - - - - - RNA polymerase I and III subunit C [Source:ZFIN;Acc:ZDB-GENE-040426-1495]
41. slc39a1 ENSDARG00000058257, ENSDARG00000112079 293 0.852 - 0.852 - - - - - - - solute carrier family 39 (zinc transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9917]
42. kif3b ENSDARG00000101120 1158 0.851 - 0.851 - - - - - - - kinesin family member 3B [Source:ZFIN;Acc:ZDB-GENE-050119-3]
43. ARAP2 ARAP2 428 0.851 - - - - - 0.851 - - -
44. gtf3c5 ENSDARG00000067979 702 0.849 - 0.849 - - - - - - - general transcription factor IIIC, polypeptide 5 [Source:ZFIN;Acc:ZDB-GENE-060810-66]
45. pitx2 ENSDARG00000036194 2279 0.847 - 0.847 - - - - - - - paired-like homeodomain 2 [Source:ZFIN;Acc:ZDB-GENE-990714-27]
46. miox ENSDARG00000002764 588 0.847 - 0.847 - - - - - - - myo-inositol oxygenase [Source:ZFIN;Acc:ZDB-GENE-050913-113]
47. smpd1 ENSDARG00000076121 584 0.844 - 0.844 - - - - - - - sphingomyelin phosphodiesterase 1, acid lysosomal [Source:ZFIN;Acc:ZDB-GENE-110411-222]
48. gabpb2a ENSDARG00000007943 1570 0.843 - 0.843 - - - - - - - GA binding protein transcription factor subunit beta 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5733]
49. MTERF MTERF 178 0.842 - - - - - - 0.842 - -
50. uggt2 ENSDARG00000062089 661 0.841 - 0.841 - - - - - - - UDP-glucose glycoprotein glucosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050517-21]
51. nudt15 ENSDARG00000113961 381 0.841 - 0.841 - - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 15 [Source:ZFIN;Acc:ZDB-GENE-040625-95]
52. magi2 magi2 301 0.84 - 0.840 - - - - - - -
53. s1pr5b ENSDARG00000052192 52 0.837 - - - - - - - 0.837 - sphingosine-1-phosphate receptor 5b [Source:ZFIN;Acc:ZDB-GENE-061201-27]
54. si:ch73-299h12.6 ENSDARG00000101319 373 0.837 - 0.837 - - - - - - - si:ch73-299h12.6 [Source:ZFIN;Acc:ZDB-GENE-081031-44]
55. si:ch211-260m19.8 si:ch211-260m19.8 33 0.837 - - - - - - - 0.837 -
56. rfng ENSDARG00000019746 627 0.836 - 0.836 - - - - - - - RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-5418]
57. si:dkey-9i23.6 ENSDARG00000094678 58 0.835 - 0.835 - - - - - - - si:dkey-9i23.6 [Source:ZFIN;Acc:ZDB-GENE-090313-365]
58. dgcr14 1608 0.833 - 0.833 - - - - - - - DiGeorge syndrome critical region gene 14
59. rad51d ENSDARG00000026400 108 0.833 0.833 - - - - - - - - RAD51 paralog D [Source:ZFIN;Acc:ZDB-GENE-040426-2490]
60. gss ENSDARG00000037706, ENSDARG00000109538 33 0.833 - - - - - - 0.833 - - glutathione synthetase [Source:ZFIN;Acc:ZDB-GENE-041010-208]
61. si:dkey-82i20.2 ENSDARG00000095126, ENSDARG00000100509 155 0.833 - 0.833 - - - - - - - si:dkey-82i20.2 [Source:ZFIN;Acc:ZDB-GENE-110914-74]
62. uhrf1bp1l ENSDARG00000004055 419 0.833 - 0.833 - - - - - - - UHRF1 binding protein 1-like [Source:ZFIN;Acc:ZDB-GENE-041210-177]
63. SLC22A3 SLC22A3 173 0.832 - 0.832 - - - - - - -
64. zdhhc4 ENSDARG00000045159, ENSDARG00000117124 625 0.832 - 0.832 - - - - - - - zinc finger, DHHC-type containing 4 [Source:ZFIN;Acc:ZDB-GENE-030131-9031]
65. fbxl5 ENSDARG00000043046 1403 0.832 0.832 - - - - - - - - F-box and leucine-rich repeat protein 5 [Source:ZFIN;Acc:ZDB-GENE-030131-900]
66. dennd1b ENSDARG00000101868 328 0.832 0.832 - - - - - - - - DENN/MADD domain containing 1B [Source:ZFIN;Acc:ZDB-GENE-060503-16]
67. FAM98C FAM98C 225 0.831 - 0.831 - - - - - - -
68. agpat9l ENSDARG00000006491, ENSDARG00000109952, ENSDARG00000112415 191 0.831 - 0.831 - - - - - - - 1-acylglycerol-3-phosphate O-acyltransferase 9, like [Source:ZFIN;Acc:ZDB-GENE-060531-19]
69. APOLD1 APOLD1 56 0.83 0.830 - - - - - - - -
70. CT573256.1 ENSDARG00000091657 18 0.827 - - - - - - - 0.827 - serine/threonine-protein kinase VRK1-like [Source:NCBI gene;Acc:794952]
71. pttg1ipa ENSDARG00000090156 44 0.827 - - - - - 0.827 - - - PTTG1 interacting protein a [Source:ZFIN;Acc:ZDB-GENE-030131-505]
72. stat2 ENSDARG00000031647, ENSDARG00000116348 441 0.826 - - - - - - 0.826 - - signal transducer and activator of transcription 2 [Source:ZFIN;Acc:ZDB-GENE-080321-1]
73. slc25a38a ENSDARG00000059805 236 0.826 - 0.826 - - - - - - - solute carrier family 25, member 38a [Source:ZFIN;Acc:ZDB-GENE-060929-320]
74. si:dkeyp-110e4.6 ENSDARG00000061845 1755 0.825 - 0.825 - - - - - - - si:dkeyp-110e4.6 [Source:ZFIN;Acc:ZDB-GENE-030219-75]
75. pcyt1ab ENSDARG00000004492 386 0.825 - 0.825 - - - - - - - phosphate cytidylyltransferase 1, choline, alpha b [Source:ZFIN;Acc:ZDB-GENE-050522-114]
76. sfmbt1 ENSDARG00000044915 892 0.825 - 0.825 - - - - - - - Scm like with four mbt domains 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2592]
77. b9d2 ENSDARG00000017385 424 0.823 - 0.823 - - - - - - - B9 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040718-90]
78. zfx ENSDARG00000074453 453 0.822 - 0.822 - - - - - - - zinc finger protein X-linked [Source:ZFIN;Acc:ZDB-GENE-061220-2]
79. fam132a fam132a 498 0.821 - 0.821 - - - - - - -
80. ZNF518B 475 0.821 0.821 - - - - - - - - zinc finger protein 518B
81. klhl6 ENSDARG00000026990 24 0.819 - - - - - - - 0.819 - kelch-like family member 6 [Source:ZFIN;Acc:ZDB-GENE-030616-325]
82. acvr2aa ENSDARG00000011188 1454 0.819 - 0.819 - - - - - - - activin A receptor type 2Aa [Source:ZFIN;Acc:ZDB-GENE-980526-227]
83. vcana ENSDARG00000103515 611 0.818 - 0.818 - - - - - - - versican a [Source:ZFIN;Acc:ZDB-GENE-011023-1]
84. si:dkey-22i16.9 ENSDARG00000095949 16 0.815 0.815 - - - - - - - - si:dkey-22i16.9 [Source:ZFIN;Acc:ZDB-GENE-090313-261]
85. CABZ01077217.1_1 ENSDARG00000079145 184 0.815 - - - - - 0.815 - - - uncharacterized LOC100007503 [Source:NCBI gene;Acc:100007503]
86. si:rp71-1i20.2 ENSDARG00000043198 113 0.815 0.815 - - - - - - - - si:rp71-1i20.2 [Source:ZFIN;Acc:ZDB-GENE-040724-207]
87. raraa ENSDARG00000056783 1404 0.813 - 0.813 - - - - - - - retinoic acid receptor, alpha a [Source:ZFIN;Acc:ZDB-GENE-980526-284]
88. si:dkey-220a11.9 si:dkey-220a11.9 10 0.811 - - - - - - - 0.811 -
89. slc35e3 ENSDARG00000045493, ENSDARG00000114987 1110 0.811 - 0.811 - - - - - - - solute carrier family 35, member E3 [Source:ZFIN;Acc:ZDB-GENE-041210-186]
90. stard10 ENSDARG00000097718 1041 0.81 - 0.810 - - - - - - - StAR-related lipid transfer (START) domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1797]
91. hnrnpc ENSDARG00000053810, ENSDARG00000113662 66 0.809 - - - - - - - 0.809 - heterogeneous nuclear ribonucleoprotein C [Source:ZFIN;Acc:ZDB-GENE-040426-2043]
92. si:ch211-210h11.7 si:ch211-210h11.7 32 0.809 - - - - - - - 0.809 -
93. C25HXorf38 C25HXorf38 516 0.807 - - - - - 0.807 - - -
94. PHC3 ENSDARG00000074604 239 0.806 0.806 - - - - - - - - polyhomeotic homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070912-369]
95. si:dkey-219c3.2 ENSDARG00000075805 619 0.806 0.806 - - - - - - - - si:dkey-219c3.2 [Source:ZFIN;Acc:ZDB-GENE-090313-238]
96. il4r il4r 75 0.805 0.805 - - - - - - - -
97. mdm1 ENSDARG00000045675 64 0.805 0.805 - - - - - - - - Mdm1 nuclear protein homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-041210-117]
98. mapkap1 ENSDARG00000091777 8 0.805 0.805 - - - - - - - - mitogen-activated protein kinase associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-041111-178]
99. si:dkey-1d7.3 ENSDARG00000075837 18 0.805 0.805 - - - - - - - - si:dkey-1d7.3 [Source:ZFIN;Acc:ZDB-GENE-091118-46]
100. creg2 ENSDARG00000000666 643 0.805 0.805 - - - - - - - - cellular repressor of E1A-stimulated genes 2 [Source:ZFIN;Acc:ZDB-GENE-041114-173]

There are 707 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA