Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ube2f

Gene Name Gene ID Reads Annotation
ube2f ENSDARG00000025754 1946 ubiquitin-conjugating enzyme E2F (putative) [Source:ZFIN;Acc:ZDB-GENE-040426-2557]










Genes with expression patterns similar to ube2f

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ube2f ENSDARG00000025754 1946 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ubiquitin-conjugating enzyme E2F (putative) [Source:ZFIN;Acc:ZDB-GENE-040426-2557]
2. wu:fb54a03 wu:fb54a03 1722 2.655 - 0.997 - - 0.912 - 0.746 - -
3. map3k7 ENSDARG00000020469 2845 2.46 0.864 - - - - - 0.832 0.764 - mitogen-activated protein kinase kinase kinase 7 [Source:ZFIN;Acc:ZDB-GENE-041001-135]
4. fhdc1 ENSDARG00000074812 934 1.911 - 0.988 - - 0.923 - - - - FH2 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040826-4]
5. clpxb ENSDARG00000067796 1918 1.879 0.886 0.993 - - - - - - - caseinolytic mitochondrial matrix peptidase chaperone subunit b [Source:ZFIN;Acc:ZDB-GENE-130404-1]
6. ddx42 ENSDARG00000037928 1659 1.829 - 0.998 - - 0.831 - - - - DEAD (Asp-Glu-Ala-Asp) box helicase 42 [Source:ZFIN;Acc:ZDB-GENE-050706-53]
7. mdm2 ENSDARG00000033443, ENSDARG00000115677 2480 1.82 - 0.965 - - 0.855 - - - - MDM2 oncogene, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-990415-153]
8. max ENSDARG00000024844 6035 1.813 - 0.980 - - 0.833 - - - - myc associated factor X [Source:ZFIN;Acc:ZDB-GENE-990415-152]
9. matr3l1.1 ENSDARG00000000394, ENSDARG00000001162 3757 1.791 - 0.994 - - 0.797 - - - - matrin 3-like 1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-40]
10. dyrk1ab ENSDARG00000023814 1769 1.787 0.789 0.998 - - - - - - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A, b [Source:ZFIN;Acc:ZDB-GENE-030131-5677]
11. zgc:111974 zgc:111974 1386 1.777 0.779 0.998 - - - - - - -
12. pi4k2b ENSDARG00000013881 1337 1.75 0.893 - - - 0.857 - - - - phosphatidylinositol 4-kinase type 2 beta [Source:ZFIN;Acc:ZDB-GENE-070112-990]
13. rsu1 ENSDARG00000102885 3604 1.75 - 0.994 - - - - 0.756 - - Ras suppressor protein 1 [Source:ZFIN;Acc:ZDB-GENE-030616-518]
14. ghra ENSDARG00000054771, ENSDARG00000112689 2883 1.748 - 0.994 - - 0.754 - - - - growth hormone receptor a [Source:ZFIN;Acc:ZDB-GENE-070509-1]
15. usp49 ENSDARG00000000229 706 1.747 0.868 - - - 0.879 - - - - ubiquitin specific peptidase 49 [Source:ZFIN;Acc:ZDB-GENE-050208-484]
16. mid1ip1l ENSDARG00000018145 2789 1.746 - 0.985 - - 0.761 - - - - MID1 interacting protein 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-1697]
17. gsk3b ENSDARG00000017803 3438 1.743 - 0.983 - - 0.760 - - - - glycogen synthase kinase 3 beta [Source:ZFIN;Acc:ZDB-GENE-990714-4]
18. si:dkey-28b4.8 ENSDARG00000002840 1277 1.743 0.871 - - - 0.872 - - - - si:dkey-28b4.8 [Source:ZFIN;Acc:ZDB-GENE-090501-2]
19. ahsa1l ahsa1l 2366 1.72 0.722 0.998 - - - - - - -
20. si:ch211-120j21.1 si:ch211-120j21.1 638 1.719 0.812 - - - 0.907 - - - -
21. si:ch211-93f2.1 ENSDARG00000101726, ENSDARG00000104818 708 1.714 0.717 0.997 - - - - - - - si:ch211-93f2.1 [Source:ZFIN;Acc:ZDB-GENE-041014-96]
22. psmd11a ENSDARG00000060150 4529 1.713 - 0.996 - - - - 0.717 - - proteasome 26S subunit, non-ATPase 11a [Source:ZFIN;Acc:ZDB-GENE-030131-2711]
23. sh3yl1 ENSDARG00000074393 815 1.712 0.818 - - - 0.894 - - - - SH3 and SYLF domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040128-16]
24. rbx1 ENSDARG00000038030 14611 1.704 0.868 0.836 - - - - - - - ring-box 1, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-041008-106]
25. cpsf5 cpsf5 1841 1.702 0.872 - - - 0.830 - - - -
26. tsc22d2 ENSDARG00000041839 1109 1.694 - 0.934 - - - - 0.760 - - TSC22 domain family 2 [Source:ZFIN;Acc:ZDB-GENE-031001-12]
27. psma4 ENSDARG00000045928 5112 1.692 0.844 - - - 0.848 - - - - proteasome subunit alpha 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1932]
28. sin3ab ENSDARG00000059812 2140 1.691 - - - - 0.901 0.790 - - - SIN3 transcription regulator family member Ab [Source:ZFIN;Acc:ZDB-GENE-030131-2066]
29. ttll4 ENSDARG00000078935 1663 1.691 0.820 - - - 0.871 - - - - tubulin tyrosine ligase-like family, member 4 [Source:ZFIN;Acc:ZDB-GENE-070912-313]
30. mycbp ENSDARG00000091001 1511 1.69 0.921 - - - 0.769 - - - - c-myc binding protein [Source:ZFIN;Acc:ZDB-GENE-060331-97]
31. impdh2 ENSDARG00000006900 3197 1.684 - 0.978 - - - - 0.706 - - IMP (inosine 5'-monophosphate) dehydrogenase 2 [Source:ZFIN;Acc:ZDB-GENE-030114-5]
32. kdm4b ENSDARG00000099675 2037 1.678 0.863 - - - - 0.815 - - - lysine (K)-specific demethylase 4B [Source:ZFIN;Acc:ZDB-GENE-060503-664]
33. leo1 ENSDARG00000055357 1644 1.675 0.870 - - - 0.805 - - - - LEO1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-040426-2435]
34. yme1l1a ENSDARG00000075192 2634 1.671 - - - - 0.865 0.806 - - - YME1-like 1a [Source:ZFIN;Acc:ZDB-GENE-091113-41]
35. ankrd28b ENSDARG00000009023 960 1.667 0.893 - - - - 0.774 - - - ankyrin repeat domain 28b [Source:ZFIN;Acc:ZDB-GENE-070622-4]
36. ktn1 ENSDARG00000032802 6251 1.665 0.873 - - - - - - 0.792 - kinectin 1 [Source:ZFIN;Acc:ZDB-GENE-030408-4]
37. ctdsp1 ENSDARG00000040674 2828 1.663 - - - - 0.857 0.806 - - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-050522-523]
38. eva1ba ENSDARG00000102701 1480 1.659 0.788 - - - 0.871 - - - - eva-1 homolog Ba (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-030131-8941]
39. hoxd10a ENSDARG00000057859 1498 1.644 0.841 - - - 0.803 - - - - homeobox D10a [Source:ZFIN;Acc:ZDB-GENE-990415-116]
40. tcta ENSDARG00000044194 1183 1.643 - - - - 0.846 0.797 - - - T cell leukemia translocation altered [Source:ZFIN;Acc:ZDB-GENE-040718-325]
41. CABZ01087568.1 CABZ01087568.1 1487 1.637 0.764 - - - 0.873 - - - -
42. TRAK2 ENSDARG00000102471 2258 1.633 0.902 - - - - 0.731 - - - trafficking protein, kinesin binding 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7496]
43. st13 ENSDARG00000021973 7787 1.626 - 0.827 - - - - 0.799 - - ST13, Hsp70 interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-5395]
44. scaf4a ENSDARG00000077093 2408 1.623 - - - - 0.838 - 0.785 - - SR-related CTD-associated factor 4a [Source:ZFIN;Acc:ZDB-GENE-030131-9003]
45. vapal ENSDARG00000115862 3108 1.62 0.872 - - - - - 0.748 - - VAMP (vesicle-associated membrane protein)-associated protein A, like [Source:ZFIN;Acc:ZDB-GENE-040718-281]
46. EPS8L2 ENSDARG00000058108 484 1.619 0.891 - - - - - - 0.728 - EPS8 like 2 [Source:ZFIN;Acc:ZDB-GENE-131121-340]
47. patl1 ENSDARG00000017423 2744 1.614 - - - - 0.846 - 0.768 - - protein associated with topoisomerase II homolog 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-070209-83]
48. decr1 ENSDARG00000003869 1344 1.607 - - - - 0.904 0.703 - - - 2,4-dienoyl CoA reductase 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040718-142]
49. oxct1a ENSDARG00000013063 1517 1.606 - - - - 0.818 - - 0.788 - 3-oxoacid CoA transferase 1a [Source:ZFIN;Acc:ZDB-GENE-040723-3]
50. kdm5c ENSDARG00000006124 4389 1.603 - - - - 0.903 0.700 - - - lysine (K)-specific demethylase 5C [Source:ZFIN;Acc:ZDB-GENE-060810-94]
51. rwdd2b ENSDARG00000055426 294 1.601 - - - - 0.894 - - 0.707 - RWD domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-041001-119]
52. ing4 ENSDARG00000030716 5908 1.594 0.872 - - - 0.722 - - - - inhibitor of growth family, member 4 [Source:ZFIN;Acc:ZDB-GENE-050522-47]
53. strn3 ENSDARG00000001729 4608 1.593 - - - - 0.842 - 0.751 - - striatin, calmodulin binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-030616-405]
54. nup210 ENSDARG00000063333 995 1.591 - - - - 0.868 - 0.723 - - nucleoporin 210 [Source:ZFIN;Acc:ZDB-GENE-050208-132]
55. fam162a ENSDARG00000063344 1812 1.59 0.816 - - - - - 0.774 - - family with sequence similarity 162, member A [Source:ZFIN;Acc:ZDB-GENE-030131-8307]
56. nop10 ENSDARG00000104227 2463 1.589 0.766 - - - - - 0.823 - - NOP10 ribonucleoprotein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-041007-4]
57. ccdc25 ENSDARG00000021753 3837 1.589 0.825 - - - - - 0.764 - - coiled-coil domain containing 25 [Source:ZFIN;Acc:ZDB-GENE-040426-1389]
58. ndufb10 ENSDARG00000028889 7680 1.586 - 0.840 - - - - - 0.746 - NADH:ubiquinone oxidoreductase subunit B10 [Source:ZFIN;Acc:ZDB-GENE-040426-1691]
59. bckdha ENSDARG00000040555, ENSDARG00000111762 7620 1.581 0.864 - - - - - 0.717 - - branched chain keto acid dehydrogenase E1, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-050522-376]
60. lmnb1 ENSDARG00000044299 9817 1.571 0.781 - - - - - 0.790 - - lamin B1 [Source:ZFIN;Acc:ZDB-GENE-020424-2]
61. lman1 ENSDARG00000069980 2550 1.57 0.843 - - - - - 0.727 - - lectin, mannose-binding, 1 [Source:ZFIN;Acc:ZDB-GENE-060201-4]
62. rnf170 ENSDARG00000104069 838 1.559 0.759 - - - - - 0.800 - - ring finger protein 170 [Source:ZFIN;Acc:ZDB-GENE-040426-2572]
63. reep1 ENSDARG00000014854 915 1.557 - - - - 0.822 - - 0.735 - receptor accessory protein 1 [Source:ZFIN;Acc:ZDB-GENE-110411-267]
64. prkacaa ENSDARG00000100349 2711 1.556 - - - - 0.843 - 0.713 - - protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a [Source:ZFIN;Acc:ZDB-GENE-050114-6]
65. lyrm4 ENSDARG00000078352 2245 1.556 0.856 - - - - - 0.700 - - LYR motif containing 4 [Source:ZFIN;Acc:ZDB-GENE-081104-295]
66. arf6a ENSDARG00000101626 2959 1.555 - - - - 0.809 0.746 - - - ADP-ribosylation factor 6a [Source:ZFIN;Acc:ZDB-GENE-030131-8007]
67. CU915738.1 CU915738.1 3723 1.555 - 0.716 - - 0.839 - - - -
68. ahctf1 ENSDARG00000077530 2315 1.554 0.847 - - - - - 0.707 - - AT hook containing transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-070521-2]
69. ppig ENSDARG00000044431 3427 1.548 - - - - 0.738 - 0.810 - - peptidylprolyl isomerase G (cyclophilin G) [Source:ZFIN;Acc:ZDB-GENE-040426-2822]
70. TSSC4 ENSDARG00000036144 1994 1.546 0.813 - - - - - 0.733 - - tumor suppressing subtransferable candidate 4 [Source:ZFIN;Acc:ZDB-GENE-060825-263]
71. MSL1_1 MSL1_1 2365 1.545 - - - - 0.793 - 0.752 - -
72. si:dkeyp-120h9.1 ENSDARG00000020278 3120 1.541 0.818 - - - - 0.723 - - - si:dkeyp-120h9.1 [Source:ZFIN;Acc:ZDB-GENE-070705-534]
73. seh1l ENSDARG00000004280 2915 1.537 - - - - 0.801 - 0.736 - - SEH1-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-6689]
74. psmb3 ENSDARG00000013938 10744 1.537 0.705 0.832 - - - - - - - proteasome subunit beta 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2682]
75. atp5e 14858 1.535 - 0.822 - - - - 0.713 - - ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit
76. lbr ENSDARG00000014013 4835 1.534 0.802 - - - - - 0.732 - - lamin B receptor [Source:ZFIN;Acc:ZDB-GENE-030804-11]
77. vps53 ENSDARG00000069324, ENSDARG00000116674 1130 1.533 0.801 - - - - 0.732 - - - vacuolar protein sorting 53 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041114-199]
78. ndufs4 ENSDARG00000052840, ENSDARG00000110036 3441 1.527 0.783 - - - - - 0.744 - - NADH:ubiquinone oxidoreductase subunit S4 [Source:ZFIN;Acc:ZDB-GENE-050522-421]
79. mrpl37 ENSDARG00000062916 1600 1.522 0.779 - - - - - - 0.743 - mitochondrial ribosomal protein L37 [Source:ZFIN;Acc:ZDB-GENE-050309-20]
80. ptbp1b ENSDARG00000031907, ENSDARG00000115714 3808 1.52 0.771 - - - 0.749 - - - - polypyrimidine tract binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9796]
81. sorbs2b ENSDARG00000061603 2491 1.519 - - - - 0.717 0.802 - - - sorbin and SH3 domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-070308-3]
82. akirin2 ENSDARG00000058729 13245 1.517 0.770 - - - - - 0.747 - - akirin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2944]
83. tomm5 ENSDARG00000068265 11813 1.515 - 0.708 - - 0.807 - - - - translocase of outer mitochondrial membrane 5 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040724-90]
84. dgcr2 ENSDARG00000042962, ENSDARG00000109230 2339 1.515 - - - - - 0.807 0.708 - - DiGeorge syndrome critical region gene 2 [Source:ZFIN;Acc:ZDB-GENE-040718-404]
85. snx27a ENSDARG00000033804 2249 1.512 0.704 - - - 0.808 - - - - sorting nexin family member 27a [Source:ZFIN;Acc:ZDB-GENE-060503-371]
86. park7 ENSDARG00000116835 1229 1.51 - - - - - 0.708 - 0.802 - parkinson protein 7 [Source:ZFIN;Acc:ZDB-GENE-041010-5]
87. lpl ENSDARG00000087697 2578 1.508 0.718 - - - 0.790 - - - - lipoprotein lipase [Source:ZFIN;Acc:ZDB-GENE-990415-139]
88. rsrc2 ENSDARG00000042534 1756 1.507 - - - - - 0.734 0.773 - - arginine/serine-rich coiled-coil 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2457]
89. b3gnt2b ENSDARG00000091902 4125 1.504 - - - - 0.780 0.724 - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2b [Source:ZFIN;Acc:ZDB-GENE-050913-158]
90. xpo1a ENSDARG00000078041 3544 1.504 0.790 - - - - - 0.714 - - exportin 1 (CRM1 homolog, yeast) a [Source:ZFIN;Acc:ZDB-GENE-050309-201]
91. wdfy1 ENSDARG00000005425 3628 1.492 - - - - 0.736 0.756 - - - WD repeat and FYVE domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041024-4]
92. bag6 ENSDARG00000075892 3782 1.49 0.787 - - - - - 0.703 - - BCL2 associated athanogene 6 [Source:ZFIN;Acc:ZDB-GENE-010501-5]
93. polr2d ENSDARG00000076509 3386 1.484 0.775 - - - 0.709 - - - - polymerase (RNA) II (DNA directed) polypeptide D [Source:ZFIN;Acc:ZDB-GENE-040714-2]
94. cul4b ENSDARG00000060510 6053 1.481 - - - - 0.770 0.711 - - - cullin 4B [Source:ZFIN;Acc:ZDB-GENE-041008-208]
95. ctdspla ENSDARG00000071673 1447 1.479 - - - - - - 0.748 0.731 - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like a [Source:ZFIN;Acc:ZDB-GENE-060825-333]
96. RBM12B ENSDARG00000079717 541 1.479 - - - - - 0.748 - 0.731 - RNA binding motif protein 12B [Source:ZFIN;Acc:ZDB-GENE-030131-6428]
97. rgs3b ENSDARG00000035132 876 1.479 0.770 - - - - 0.709 - - - regulator of G protein signaling 3b [Source:ZFIN;Acc:ZDB-GENE-060531-24]
98. cdca8 ENSDARG00000043137 7541 1.476 - 0.712 - - - - 0.764 - - cell division cycle associated 8 [Source:ZFIN;Acc:ZDB-GENE-041114-171]
99. Sep-06 Sep-06 5465 1.47 0.753 - - - - - 0.717 - -
100. b3gnt5a ENSDARG00000018971 938 1.466 - - - - - 0.725 0.741 - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5a [Source:ZFIN;Acc:ZDB-GENE-030131-8470]

There are 1389 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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