Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ube2e1

Gene Name Gene ID Reads Annotation
ube2e1 ENSDARG00000116649 10656 ubiquitin-conjugating enzyme E2E 1 [Source:ZFIN;Acc:ZDB-GENE-071004-16]










Genes with expression patterns similar to ube2e1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ube2e1 ENSDARG00000116649 10656 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ubiquitin-conjugating enzyme E2E 1 [Source:ZFIN;Acc:ZDB-GENE-071004-16]
2. AP3B1 2363 2.666 0.930 0.750 - - - - - - 0.986 adaptor related protein complex 3 beta 1 subunit
3. nfya ENSDARG00000042004, ENSDARG00000114231 6606 2.624 - - - - 0.889 0.783 0.952 - - nuclear transcription factor Y, alpha [Source:ZFIN;Acc:ZDB-GENE-010501-1]
4. atrx ENSDARG00000042236, ENSDARG00000112921, ENSDARG00000116878 7922 2.591 0.887 - - 0.718 - - - - 0.986 alpha thalassemia/mental retardation syndrome X-linked homolog (human) [Source:ZFIN;Acc:ZDB-GENE-030912-11]
5. kif5ba ENSDARG00000074131, ENSDARG00000103394 5232 2.569 0.946 - - - - 0.706 0.917 - - kinesin family member 5B, a [Source:ZFIN;Acc:ZDB-GENE-070629-2]
6. klc2 3058 2.53 - - - - 0.858 0.737 0.935 - - kinesin light chain 2
7. ier5 ENSDARG00000009881, ENSDARG00000111680 11432 2.502 0.900 0.870 - - - 0.732 - - - immediate early response 5 [Source:ZFIN;Acc:ZDB-GENE-030616-127]
8. PRODH2 PRODH2 1153 2.478 0.885 0.738 - - - - 0.855 - -
9. srsf3b ENSDARG00000059360 14888 2.475 - - 0.993 - - 0.709 0.773 - - serine/arginine-rich splicing factor 3b [Source:ZFIN;Acc:ZDB-GENE-071005-2]
10. pl10 pl10 10795 2.429 - 0.719 - - - 0.723 - - 0.987
11. dpy30 ENSDARG00000004427 7112 2.428 0.888 - - 0.754 - 0.786 - - - dpy-30 histone methyltransferase complex regulatory subunit [Source:ZFIN;Acc:ZDB-GENE-040718-136]
12. caprin1a ENSDARG00000009346, ENSDARG00000112212 9675 2.427 - 0.858 - - 0.755 0.814 - - - cell cycle associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-226]
13. shfm1 7620 2.392 - 0.704 - - - 0.704 - - 0.984 split hand/foot malformation (ectrodactyly) type 1
14. lmnb2 ENSDARG00000101624 11304 2.354 0.832 - - 0.737 - - 0.785 - - lamin B2 [Source:ZFIN;Acc:ZDB-GENE-990630-13]
15. tgif1 ENSDARG00000059337 4020 2.327 - 0.773 - 0.710 0.844 - - - - TGFB-induced factor homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030131-475]
16. chd4b ENSDARG00000025789 14299 2.296 - 0.743 - - - - 0.788 0.765 - chromodomain helicase DNA binding protein 4b [Source:ZFIN;Acc:ZDB-GENE-030131-4532]
17. rbfox2 ENSDARG00000052182 6621 2.159 - 0.732 - 0.718 - - - 0.709 - RNA binding fox-1 homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2464]
18. dnmt1 ENSDARG00000030756 2741 1.952 - - - - - - 0.966 - 0.986 DNA (cytosine-5-)-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-990714-15]
19. ik ENSDARG00000004161 3132 1.95 - - 0.995 - - - 0.955 - - IK cytokine [Source:ZFIN;Acc:ZDB-GENE-030131-960]
20. eif2ak3 ENSDARG00000062139 3276 1.947 - - 0.995 - - - 0.952 - - eukaryotic translation initiation factor 2-alpha kinase 3 [Source:ZFIN;Acc:ZDB-GENE-050414-2]
21. si:dkey-42i9.4 ENSDARG00000008049 4752 1.938 0.943 - - - - - - - 0.995 si:dkey-42i9.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8398]
22. col6a1 ENSDARG00000074908 2339 1.911 0.946 - - - - - 0.965 - - collagen, type VI, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-070501-6]
23. kif2c ENSDARG00000076228 2281 1.907 - - - - - - 0.918 - 0.989 kinesin family member 2C [Source:ZFIN;Acc:ZDB-GENE-070912-298]
24. eif4ebp1 ENSDARG00000043608, ENSDARG00000113927 9982 1.904 - - 0.992 - - - 0.912 - - eukaryotic translation initiation factor 4E binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2332]
25. mrpl12 ENSDARG00000038768 5539 1.899 - - 0.994 - - - 0.905 - - mitochondrial ribosomal protein L12 [Source:ZFIN;Acc:ZDB-GENE-050417-187]
26. TMEM184B TMEM184B 1280 1.885 0.950 - - - - - 0.935 - -
27. smx5 ENSDARG00000070867, ENSDARG00000111500, ENSDARG00000113078, ENSDARG00000113975 3132 1.883 0.927 - - - - - 0.956 - - smx5 [Source:ZFIN;Acc:ZDB-GENE-000616-10]
28. cxcl14 ENSDARG00000056627, ENSDARG00000113190 4665 1.877 - - - - - - 0.903 - 0.974 chemokine (C-X-C motif) ligand 14 [Source:ZFIN;Acc:ZDB-GENE-000619-1]
29. erh ENSDARG00000032866 20633 1.874 - - 0.955 - - - 0.919 - - enhancer of rudimentary homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-990415-57]
30. timm10b ENSDARG00000043898 1233 1.87 0.941 - - - - - 0.929 - - translocase of inner mitochondrial membrane 10 homolog B (yeast) [Source:ZFIN;Acc:ZDB-GENE-050417-370]
31. BAHD1 ENSDARG00000086789 1194 1.863 0.947 - - - - - 0.916 - - bromo adjacent homology domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-120411-42]
32. smarcal1 ENSDARG00000102265 1921 1.856 - - 0.995 - 0.861 - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 [Source:ZFIN;Acc:ZDB-GENE-041210-303]
33. uqcrfs1 ENSDARG00000007745 4654 1.854 0.921 - - - - - 0.933 - - ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2060]
34. zcchc9 ENSDARG00000007531 1748 1.841 - - - - 0.856 - - - 0.985 zinc finger, CCHC domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-031030-9]
35. tyms ENSDARG00000042894 3068 1.833 - - - - 0.857 - 0.976 - - thymidylate synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-59]
36. wipi1 ENSDARG00000040657 2732 1.828 0.881 - - - - - 0.947 - - WD repeat domain, phosphoinositide interacting 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1404]
37. sf3a1 ENSDARG00000041887 6702 1.825 - - 0.966 - 0.859 - - - - splicing factor 3a, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030616-156]
38. cops8 ENSDARG00000024846, ENSDARG00000115974 3053 1.824 0.915 - - - - - 0.909 - - COP9 signalosome subunit 8 [Source:ZFIN;Acc:ZDB-GENE-040426-982]
39. yap1 ENSDARG00000068401, ENSDARG00000112952 16365 1.819 - - 0.995 - - - 0.824 - - Yes-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9710]
40. zgc:55512 zgc:55512 4436 1.815 - - - - 0.838 - - - 0.977
41. aph1b ENSDARG00000005612, ENSDARG00000111794 3318 1.81 0.913 - - - - - 0.897 - - APH1B gamma secretase subunit [Source:ZFIN;Acc:ZDB-GENE-031118-31]
42. arpc4l ENSDARG00000058225 10107 1.796 0.889 - - - - - 0.907 - - actin related protein 2/3 complex, subunit 4, like [Source:ZFIN;Acc:ZDB-GENE-040808-18]
43. dnajc9 ENSDARG00000031293, ENSDARG00000111989 4082 1.795 - - - - 0.859 - 0.936 - - DnaJ (Hsp40) homolog, subfamily C, member 9 [Source:ZFIN;Acc:ZDB-GENE-040718-130]
44. kansl3 ENSDARG00000029556 2487 1.795 - - - - 0.851 - 0.944 - - KAT8 regulatory NSL complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-050809-132]
45. cnksr1 ENSDARG00000032932, ENSDARG00000109531 2272 1.794 0.947 - - - - - 0.847 - - connector enhancer of kinase suppressor of Ras 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1802]
46. ppp3r1a ENSDARG00000092659 9729 1.794 0.915 - - - - - 0.879 - - protein phosphatase 3, regulatory subunit B, alpha a [Source:ZFIN;Acc:ZDB-GENE-081113-3]
47. ankrd13c ENSDARG00000103831 3593 1.791 - - - - 0.834 - 0.957 - - ankyrin repeat domain 13C [Source:ZFIN;Acc:ZDB-GENE-030131-3892]
48. cdc14b ENSDARG00000021483 4958 1.786 - - - - 0.852 - 0.934 - - cell division cycle 14B [Source:ZFIN;Acc:ZDB-GENE-040426-820]
49. h6pd ENSDARG00000060153, ENSDARG00000114064 1927 1.783 0.862 - - - - - 0.921 - - hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) [Source:ZFIN;Acc:ZDB-GENE-110408-60]
50. snrnp70 ENSDARG00000077126 5921 1.783 - - - - 0.852 - 0.931 - - small nuclear ribonucleoprotein 70 (U1) [Source:ZFIN;Acc:ZDB-GENE-040825-2]
51. zgc:162816 ENSDARG00000070416 974 1.783 - - - - 0.859 - 0.924 - - zgc:162816 [Source:ZFIN;Acc:ZDB-GENE-070410-94]
52. lmo4b ENSDARG00000054749, ENSDARG00000115402 1397 1.779 0.939 0.840 - - - - - - - LIM domain only 4b [Source:ZFIN;Acc:ZDB-GENE-030131-3570]
53. zdhhc5a ENSDARG00000016263 625 1.777 - - - - 0.847 - 0.930 - - zinc finger, DHHC-type containing 5a [Source:ZFIN;Acc:ZDB-GENE-090312-92]
54. RNF38 ENSDARG00000062055 3901 1.775 - - - - - 0.803 - - 0.972 ring finger protein 38 [Source:ZFIN;Acc:ZDB-GENE-030131-8693]
55. ap1b1 ENSDARG00000020621 3874 1.774 - - - - 0.829 - 0.945 - - adaptor related protein complex 1 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-061025-1]
56. smo ENSDARG00000002952 6411 1.774 - - 0.990 - - 0.784 - - - smoothened, frizzled class receptor [Source:ZFIN;Acc:ZDB-GENE-980526-89]
57. ppp1r3ca ENSDARG00000071005, ENSDARG00000111817, ENSDARG00000112962 2641 1.771 0.920 - - - 0.851 - - - - protein phosphatase 1, regulatory subunit 3Ca [Source:ZFIN;Acc:ZDB-GENE-040718-70]
58. abl1 ENSDARG00000035187 3553 1.76 - - - - 0.852 - 0.908 - - c-abl oncogene 1, non-receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-100812-9]
59. kmt2a ENSDARG00000004537 2169 1.754 - - - - - 0.826 0.928 - - lysine (K)-specific methyltransferase 2A [Source:ZFIN;Acc:ZDB-GENE-080521-3]
60. cplx4b ENSDARG00000059486 3192 1.753 0.879 0.874 - - - - - - - complexin 4b [Source:ZFIN;Acc:ZDB-GENE-070705-157]
61. api5 ENSDARG00000033597 6655 1.75 - - - - - 0.754 - - 0.996 apoptosis inhibitor 5 [Source:ZFIN;Acc:ZDB-GENE-030131-395]
62. tspan14 ENSDARG00000055938, ENSDARG00000117111 4518 1.748 0.940 0.808 - - - - - - - tetraspanin 14 [Source:ZFIN;Acc:ZDB-GENE-060825-329]
63. kdm4b ENSDARG00000099675 2037 1.746 - - - - - 0.817 0.929 - - lysine (K)-specific demethylase 4B [Source:ZFIN;Acc:ZDB-GENE-060503-664]
64. srrm2 ENSDARG00000037965 1967 1.738 - 0.813 - - - - 0.925 - - serine/arginine repetitive matrix 2 [Source:ZFIN;Acc:ZDB-GENE-050522-399]
65. si:ch211-22i13.2 ENSDARG00000043485 4719 1.736 - - - - 0.824 - 0.912 - - si:ch211-22i13.2 [Source:ZFIN;Acc:ZDB-GENE-041014-143]
66. cdh2 ENSDARG00000018693, ENSDARG00000117201 9869 1.731 - - 0.977 - - - 0.754 - - cadherin 2, type 1, N-cadherin (neuronal) [Source:ZFIN;Acc:ZDB-GENE-990415-171]
67. arpc1a ENSDARG00000008383 7353 1.728 0.886 0.842 - - - - - - - actin related protein 2/3 complex, subunit 1A [Source:ZFIN;Acc:ZDB-GENE-040116-1]
68. mapk3 ENSDARG00000070573 6842 1.724 0.876 0.848 - - - - - - - mitogen-activated protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-040121-1]
69. ap1s1 ENSDARG00000056803 3854 1.723 - 0.765 - - - - 0.958 - - adaptor related protein complex 1 subunit sigma 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1119]
70. h2afvb ENSDARG00000116491 35692 1.72 - 0.881 - - - 0.839 - - - H2A histone family, member Vb [Source:ZFIN;Acc:ZDB-GENE-050506-24]
71. mtdha ENSDARG00000014159, ENSDARG00000115030 9903 1.719 - - - - - 0.768 - - 0.951 metadherin a [Source:ZFIN;Acc:ZDB-GENE-030616-615]
72. si:dkey-82i20.5 ENSDARG00000116717 2965 1.714 - 0.790 - - - - 0.924 - - si:dkey-82i20.5 [Source:ZFIN;Acc:ZDB-GENE-110914-101]
73. efr3bb 1533 1.712 - - - - - 0.726 - - 0.986 EFR3 homolog Bb (S. cerevisiae), transcript variant X2
74. TAF2 ENSDARG00000102307 1401 1.711 - - - - - 0.747 0.964 - - TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-3207]
75. znf865 ENSDARG00000036698 15532 1.709 - - 0.957 - - 0.752 - - - zinc finger protein 865 [Source:ZFIN;Acc:ZDB-GENE-060503-896]
76. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 1.708 0.941 - - 0.767 - - - - - splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
77. gabarapa ENSDARG00000035557, ENSDARG00000110690 6723 1.706 0.947 0.759 - - - - - - - GABA(A) receptor-associated protein a [Source:ZFIN;Acc:ZDB-GENE-030131-5174]
78. SEMA4B SEMA4B 1259 1.7 - 0.819 - - - - 0.881 - -
79. ef1 1343 1.697 - 0.756 - - - - 0.941 - - E74-like factor 1 (ets domain transcription factor), transcript variant X4
80. pkp1b ENSDARG00000052705 1077 1.696 - 0.779 - - - - 0.917 - - plakophilin 1b [Source:ZFIN;Acc:ZDB-GENE-030131-417]
81. glud1a ENSDARG00000008816, ENSDARG00000114252 3468 1.695 0.938 0.757 - - - - - - - glutamate dehydrogenase 1a [Source:ZFIN;Acc:ZDB-GENE-030114-2]
82. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 1.693 0.922 - - - 0.771 - - - - EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
83. si:ch211-196l7.4 ENSDARG00000095451 3766 1.692 - 0.762 - - - - 0.930 - - si:ch211-196l7.4 [Source:ZFIN;Acc:ZDB-GENE-050419-122]
84. TOM1L2 ENSDARG00000056394 793 1.691 0.939 - - - - 0.752 - - - target of myb1 like 2 membrane trafficking protein [Source:HGNC Symbol;Acc:HGNC:11984]
85. plxna4 ENSDARG00000019328 782 1.687 - - - - - 0.756 0.931 - - plexin A4 [Source:ZFIN;Acc:ZDB-GENE-030131-4663]
86. hnrnph1l ENSDARG00000005551 8727 1.681 - - - 0.844 0.837 - - - - heterogeneous nuclear ribonucleoprotein H1, like [Source:ZFIN;Acc:ZDB-GENE-030131-275]
87. wu:fc51f04 wu:fc51f04 7074 1.68 0.878 - - - - - 0.802 - -
88. uhrf1 ENSDARG00000103409 3282 1.68 - - - 0.740 - - 0.940 - - ubiquitin-like with PHD and ring finger domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2039]
89. phf21ab ENSDARG00000021378 1706 1.68 - - - 0.737 - - 0.943 - - PHD finger protein 21Ab [Source:ZFIN;Acc:ZDB-GENE-030131-6456]
90. rab11ba ENSDARG00000041878 4651 1.679 - - - - 0.828 - 0.851 - - RAB11B, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-040426-2860]
91. ext2 ENSDARG00000056648 1322 1.679 0.940 - - - - 0.739 - - - exostosin glycosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-041124-3]
92. cdkn2aipnl ENSDARG00000053395 5107 1.676 - - - 0.732 - - 0.944 - - CDKN2A interacting protein N-terminal like [Source:ZFIN;Acc:ZDB-GENE-041010-154]
93. ptgdsb ptgdsb 5200 1.675 - 0.778 - - - - 0.897 - -
94. snx11 ENSDARG00000052522 1030 1.669 0.943 0.726 - - - - - - - sorting nexin 11 [Source:ZFIN;Acc:ZDB-GENE-041111-253]
95. prkaa1 ENSDARG00000060596 1448 1.668 - 0.725 - - - - 0.943 - - protein kinase, AMP-activated, alpha 1 catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-030325-1]
96. smarca5 ENSDARG00000052348 15433 1.665 0.898 - - - - - - 0.767 - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:ZFIN;Acc:ZDB-GENE-021125-1]
97. clta ENSDARG00000045618, ENSDARG00000115484 11767 1.665 0.888 - - - - 0.777 - - - clathrin, light chain A [Source:ZFIN;Acc:ZDB-GENE-040426-1986]
98. atp2b4 5891 1.665 0.866 - - - - 0.799 - - - ATPase, Ca++ transporting, plasma membrane 4
99. ckap5 ENSDARG00000102674 5068 1.662 - - - - - 0.730 0.932 - - cytoskeleton associated protein 5 [Source:ZFIN;Acc:ZDB-GENE-051120-174]
100. gapdhs ENSDARG00000039914 8760 1.661 - 0.716 - - 0.945 - - - - glyceraldehyde-3-phosphate dehydrogenase, spermatogenic [Source:ZFIN;Acc:ZDB-GENE-020913-1]

There are 1543 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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