Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ube2d4

Gene Name Gene ID Reads Annotation
ube2d4 ENSDARG00000015057 1089 ubiquitin-conjugating enzyme E2D 4 (putative) [Source:ZFIN;Acc:ZDB-GENE-070424-86]










Genes with expression patterns similar to ube2d4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ube2d4 ENSDARG00000015057 1089 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ubiquitin-conjugating enzyme E2D 4 (putative) [Source:ZFIN;Acc:ZDB-GENE-070424-86]
2. xirp2a ENSDARG00000071113 7113 2.594 0.898 0.883 - - - - 0.813 - - xin actin binding repeat containing 2a [Source:ZFIN;Acc:ZDB-GENE-040108-7]
3. trdn ENSDARG00000041779 4283 2.508 0.895 0.847 - - - - 0.766 - - triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
4. ITGB1BP2 ENSDARG00000030176 2472 2.502 0.811 0.886 - - - - 0.805 - - integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
5. myod1 ENSDARG00000030110 6019 2.495 0.885 0.815 - - - - 0.795 - - myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
6. cacnb1 ENSDARG00000002167 1402 2.493 0.812 0.847 - - - - 0.834 - - calcium channel, voltage-dependent, beta 1 subunit [Source:ZFIN;Acc:ZDB-GENE-040718-399]
7. hapln1a ENSDARG00000089769 12334 2.482 0.893 0.810 - - - - 0.779 - - hyaluronan and proteoglycan link protein 1a [Source:ZFIN;Acc:ZDB-GENE-050302-175]
8. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 2.475 0.822 0.843 - - - - 0.810 - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
9. EHBP1L1 EHBP1L1 2500 2.464 0.853 0.895 - - - - 0.716 - -
10. myhc4 ENSDARG00000035438 1322 2.463 0.788 0.875 - - - - 0.800 - - myosin heavy chain 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6206]
11. srl ENSDARG00000104587 11126 2.46 0.826 0.876 - - - - 0.758 - - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
12. TMPO TMPO 3264 2.456 0.864 0.884 - - - - 0.708 - -
13. PTPLA PTPLA 4044 2.453 0.876 0.790 - - - - 0.787 - -
14. gypc ENSDARG00000041546 1487 2.446 0.830 0.900 - - - - 0.716 - - glycophorin C (Gerbich blood group) [Source:ZFIN;Acc:ZDB-GENE-030131-7930]
15. cacna2d1a ENSDARG00000014804 1924 2.443 0.796 0.844 - - - - 0.803 - - calcium channel, voltage-dependent, alpha 2/delta subunit 1a [Source:ZFIN;Acc:ZDB-GENE-041210-215]
16. si:ch211-114n24.7 si:ch211-114n24.7 2544 2.436 0.806 0.915 - - - - 0.715 - -
17. fitm1 ENSDARG00000056464 1759 2.435 0.818 0.900 - - - - 0.717 - - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
18. mir133b_1 671 2.431 0.818 0.804 - - - - 0.809 - - microRNA 133b
19. klhl40a ENSDARG00000039052 2537 2.426 0.780 0.916 - - - - 0.730 - - kelch-like family member 40a [Source:ZFIN;Acc:ZDB-GENE-050916-1]
20. MYOT ENSDARG00000076312 1791 2.425 0.866 0.804 - - - - 0.755 - - myotilin [Source:ZFIN;Acc:ZDB-GENE-110411-129]
21. txlnbb ENSDARG00000076241 6396 2.421 0.779 0.873 - - - - 0.769 - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
22. znf106a ENSDARG00000016651 6049 2.411 0.782 0.834 - - - - 0.795 - - zinc finger protein 106a [Source:ZFIN;Acc:ZDB-GENE-040718-21]
23. prx ENSDARG00000017246 6183 2.396 0.796 0.813 - - - - 0.787 - - periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]
24. pygma ENSDARG00000055518 15972 2.39 0.851 0.831 - - - - 0.708 - - phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
25. chrna1 ENSDARG00000009021 2931 2.381 0.844 0.819 - - - - 0.718 - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
26. ryr3 ENSDARG00000071331 6795 2.377 0.734 0.859 - - - - 0.784 - - ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
27. trim55a ENSDARG00000029596 2858 2.372 0.767 0.877 - - - - 0.728 - - tripartite motif containing 55a [Source:ZFIN;Acc:ZDB-GENE-040718-50]
28. cacng1 cacng1 3118 2.367 0.818 0.849 - - - 0.700 - - -
29. BX530018.3 ENSDARG00000107022 614 2.364 0.861 0.702 - - - - 0.801 - -
30. CR388002.1 CR388002.1 1998 2.358 0.707 0.832 - - - - 0.819 - -
31. MYOM3 2720 2.358 0.827 0.819 - - - - 0.712 - - myomesin 3, transcript variant X2
32. NEURL2 ENSDARG00000062446, ENSDARG00000110488 483 2.357 0.807 0.849 - - - - 0.701 - - neuralized E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-070410-31]
33. palm1a ENSDARG00000026882, ENSDARG00000115356 3425 2.353 0.785 0.839 - - - - 0.729 - - paralemmin 1a [Source:ZFIN;Acc:ZDB-GENE-050417-409]
34. BX294434.1 ENSDARG00000061272 6493 2.352 0.774 0.854 - - - - 0.724 - - solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
35. cap2 ENSDARG00000104478 3266 2.349 0.756 0.766 - - - - 0.827 - - CAP, adenylate cyclase-associated protein, 2 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1758]
36. sptb ENSDARG00000030490 7128 2.334 0.810 0.821 - - - - 0.703 - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
37. cfl2 ENSDARG00000014106 8051 2.332 0.738 0.874 - - - - 0.720 - - cofilin 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040426-1815]
38. NRAP ENSDARG00000009341 3565 2.315 0.751 0.798 - - - - 0.766 - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
39. sh3bgr ENSDARG00000021633 3498 2.313 0.818 0.789 - - - - 0.706 - - SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
40. casq1b ENSDARG00000018105 2643 2.299 0.749 0.832 - - - - 0.718 - - calsequestrin 1b [Source:ZFIN;Acc:ZDB-GENE-060929-1070]
41. usp28 ENSDARG00000008880 1850 2.287 0.836 0.735 - - - - 0.716 - - ubiquitin specific peptidase 28 [Source:ZFIN;Acc:ZDB-GENE-041008-142]
42. hhatla ENSDARG00000039051 6598 2.286 0.747 0.798 - - - - 0.741 - - hedgehog acyltransferase like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1865]
43. atp1a2a ENSDARG00000010472, ENSDARG00000111818, ENSDARG00000115733 6341 2.285 0.714 0.851 - - - - 0.720 - - ATPase Na+/K+ transporting subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-001212-6]
44. TRIM63 TRIM63 1600 2.278 0.739 0.797 - - - - 0.742 - -
45. CR792456.1 CR792456.1 783 2.269 0.705 0.771 - - - - 0.793 - -
46. ppp1r13ba ENSDARG00000004377 1353 2.254 0.741 - - - - 0.753 0.760 - - protein phosphatase 1, regulatory subunit 13Ba [Source:ZFIN;Acc:ZDB-GENE-030131-9805]
47. sucla2 ENSDARG00000005359 5992 2.249 0.805 0.740 - - - 0.704 - - - succinate-CoA ligase, ADP-forming, beta subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1963]
48. zgc:110655 zgc:110655 4237 2.239 0.730 0.730 - - - 0.779 - - -
49. alg3 ENSDARG00000053155 1843 2.219 0.712 0.737 - - - - 0.770 - - asparagine-linked glycosylation 3 (alpha-1,3-mannosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-050522-334]
50. smpx ENSDARG00000045302 2175 2.205 0.758 - - - - 0.721 0.726 - - small muscle protein X-linked [Source:ZFIN;Acc:ZDB-GENE-040704-24]
51. slc20a2 ENSDARG00000060796, ENSDARG00000113613 5420 2.199 0.718 0.747 - - - 0.734 - - - solute carrier family 20 (phosphate transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-060929-828]
52. naca ENSDARG00000005513 2745 2.195 0.780 0.708 - - - - 0.707 - - nascent polypeptide associated complex subunit alpha [Source:ZFIN;Acc:ZDB-GENE-020423-4]
53. CR847973.1 ENSDARG00000115516 8754 2.192 0.722 0.760 - - - - 0.710 - -
54. eya1 ENSDARG00000014259, ENSDARG00000116267 5111 2.188 0.733 0.736 - - - - 0.719 - - EYA transcriptional coactivator and phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-990712-18]
55. slc8a3 ENSDARG00000004931 338 1.796 0.915 - - - - - 0.881 - - solute carrier family 8 (sodium/calcium exchanger), member 3 [Source:ZFIN;Acc:ZDB-GENE-050810-1]
56. klhl41a ENSDARG00000068888 1034 1.762 0.846 0.916 - - - - - - - kelch-like family member 41a [Source:ZFIN;Acc:ZDB-GENE-081105-22]
57. smarcd3a ENSDARG00000038786 2894 1.754 - 0.879 - - - - 0.875 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3a [Source:ZFIN;Acc:ZDB-GENE-070912-491]
58. NAT16 ENSDARG00000086222 4682 1.742 0.855 - - - - - 0.887 - - N-acetyltransferase 16 [Source:ZFIN;Acc:ZDB-GENE-030219-43]
59. plecb ENSDARG00000021987 13621 1.741 0.882 0.859 - - - - - - - plectin b [Source:ZFIN;Acc:ZDB-GENE-100917-2]
60. arpp21 ENSDARG00000061081 892 1.732 0.876 0.856 - - - - - - - cAMP-regulated phosphoprotein, 21 [Source:ZFIN;Acc:ZDB-GENE-081104-296]
61. C13H10orf71 3489 1.73 0.827 0.903 - - - - - - - chromosome 13 C10orf71 homolog
62. actn3b ENSDARG00000001431 15747 1.729 0.819 0.910 - - - - - - - actinin alpha 3b [Source:ZFIN;Acc:ZDB-GENE-030131-2040]
63. CU633479.5 ENSDARG00000114818 1815 1.724 0.851 0.873 - - - - - - -
64. ache ENSDARG00000031796 1985 1.723 - 0.787 - - - - 0.936 - - acetylcholinesterase [Source:ZFIN;Acc:ZDB-GENE-010906-1]
65. limch1a ENSDARG00000074275 2981 1.721 0.903 0.818 - - - - - - - LIM and calponin homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-090312-153]
66. CR354540.2 ENSDARG00000117517 18452 1.719 0.952 - - - - - 0.767 - -
67. pebp1 ENSDARG00000042069 6651 1.719 - 0.841 - - - - 0.878 - - phosphatidylethanolamine binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2621]
68. si:ch73-367p23.2 ENSDARG00000096257, ENSDARG00000112155 27188 1.718 0.880 0.838 - - - - - - - si:ch73-367p23.2 [Source:ZFIN;Acc:ZDB-GENE-120215-61]
69. tgm1l1 ENSDARG00000102106 1437 1.707 0.810 0.897 - - - - - - - transglutaminase 1 like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-139]
70. BX001033.2 BX001033.2 857 1.707 0.862 0.845 - - - - - - -
71. CABZ01090021.1 CABZ01090021.1 655 1.703 0.874 0.829 - - - - - - -
72. ank1 ank1 5209 1.694 0.869 0.825 - - - - - - -
73. apobec2a ENSDARG00000018881 4790 1.681 0.767 0.914 - - - - - - - apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2a [Source:ZFIN;Acc:ZDB-GENE-050306-15]
74. vcl vcl 6667 1.676 0.787 0.889 - - - - - - -
75. CBFA2T3 ENSDARG00000079012 6799 1.674 - 0.891 - - - - 0.783 - - core-binding factor, runt domain, alpha subunit 2; translocated to, 3 [Source:ZFIN;Acc:ZDB-GENE-070209-2]
76. si:ch211-242b18.1 ENSDARG00000054723 2929 1.671 0.758 0.913 - - - - - - - si:ch211-242b18.1 [Source:ZFIN;Acc:ZDB-GENE-030131-1518]
77. alpk3a ENSDARG00000078989 1992 1.666 0.762 0.904 - - - - - - - alpha-kinase 3a [Source:ZFIN;Acc:ZDB-GENE-050419-48]
78. mybpc2b ENSDARG00000021265 9618 1.662 0.798 0.864 - - - - - - - myosin binding protein C, fast type b [Source:ZFIN;Acc:ZDB-GENE-050320-80]
79. nmrk2 ENSDARG00000067848 10293 1.654 - 0.890 - - - - 0.764 - - nicotinamide riboside kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040912-44]
80. kcnma1a ENSDARG00000079840 2584 1.652 0.859 0.793 - - - - - - - potassium large conductance calcium-activated channel, subfamily M, alpha member 1a [Source:ZFIN;Acc:ZDB-GENE-070202-9]
81. tmsb ENSDARG00000054911 6411 1.652 - 0.825 - - - - 0.827 - - thymosin, beta [Source:ZFIN;Acc:ZDB-GENE-050307-5]
82. ptrfa ptrfa 4363 1.651 0.856 0.795 - - - - - - -
83. si:ch211-156j16.1 ENSDARG00000092035 7441 1.649 0.891 - - - - - 0.758 - - si:ch211-156j16.1 [Source:ZFIN;Acc:ZDB-GENE-030131-4106]
84. tns1 tns1 5891 1.648 0.853 0.795 - - - - - - -
85. ryr1b ENSDARG00000023797 5693 1.646 - 0.889 - - - - 0.757 - - ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
86. smyd1b ENSDARG00000091253 4964 1.642 0.848 0.794 - - - - - - - SET and MYND domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-060522-1]
87. tnw 16679 1.64 - 0.871 - - - - 0.769 - - tenascin W, transcript variant X2
88. myhz2 ENSDARG00000012944 69921 1.64 0.906 - - - - - 0.734 - - myosin, heavy polypeptide 2, fast muscle specific [Source:ZFIN;Acc:ZDB-GENE-020604-1]
89. nexn ENSDARG00000057317 10972 1.64 0.910 - - - - - 0.730 - - nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
90. sox6 ENSDARG00000015536 7728 1.64 0.825 - - - - - 0.815 - - SRY (sex determining region Y)-box 6 [Source:ZFIN;Acc:ZDB-GENE-081120-6]
91. ddx55 ENSDARG00000009864 415 1.639 - 0.744 - - - - 0.895 - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Source:ZFIN;Acc:ZDB-GENE-021212-1]
92. tgm2a ENSDARG00000070157 4516 1.638 0.861 - - - - 0.777 - - - transglutaminase 2, C polypeptide A [Source:ZFIN;Acc:ZDB-GENE-040912-78]
93. PHB2 PHB2 3755 1.638 0.716 0.922 - - - - - - -
94. smyd2b ENSDARG00000005629 8181 1.636 0.803 0.833 - - - - - - - SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
95. tmem47 ENSDARG00000057322 4691 1.634 - 0.763 - - - - 0.871 - - transmembrane protein 47 [Source:ZFIN;Acc:ZDB-GENE-040426-2644]
96. BX324201.1 BX324201.1 3302 1.633 0.869 - - - - - 0.764 - -
97. fxr1 ENSDARG00000022968 2831 1.633 0.839 - - - - - 0.794 - - fragile X mental retardation, autosomal homolog 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5431]
98. alpk2 ENSDARG00000079637 1483 1.631 0.853 0.778 - - - - - - - alpha-kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1868]
99. hspg2 ENSDARG00000076564 3440 1.63 0.717 0.913 - - - - - - - heparan sulfate proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-080807-4]
100. metap2a ENSDARG00000069261 762 1.629 0.893 0.736 - - - - - - - methionyl aminopeptidase 2a [Source:ZFIN;Acc:ZDB-GENE-061013-5]

There are 1225 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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