Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ube2d1a

Gene Name Gene ID Reads Annotation
ube2d1a ENSDARG00000029107, ENSDARG00000111656 3658 ubiquitin-conjugating enzyme E2D 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1609]










Genes with expression patterns similar to ube2d1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ube2d1a ENSDARG00000029107, ENSDARG00000111656 3658 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ubiquitin-conjugating enzyme E2D 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1609]
2. mcm2 ENSDARG00000102798 8148 2.616 0.950 - - 0.898 - - 0.768 - - minichromosome maintenance complex component 2 [Source:ZFIN;Acc:ZDB-GENE-020419-24]
3. GIT1 ENSDARG00000039489 1157 2.568 0.977 0.855 - - - 0.736 - - - G protein-coupled receptor kinase interacting ArfGAP 1 [Source:ZFIN;Acc:ZDB-GENE-100408-5]
4. smc1al ENSDARG00000058203 8838 2.412 - 0.704 - 0.993 - 0.715 - - - structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]
5. hnrpl 6412 2.392 0.932 - - - - - 0.719 - 0.741 heterogeneous nuclear ribonucleoprotein L, transcript variant X1
6. snrnp70 ENSDARG00000077126 5921 2.38 - - - - - 0.799 - 0.705 0.876 small nuclear ribonucleoprotein 70 (U1) [Source:ZFIN;Acc:ZDB-GENE-040825-2]
7. oxsr1a ENSDARG00000034189 4314 2.356 - 0.740 - - - - 0.807 - 0.809 oxidative stress responsive 1a [Source:ZFIN;Acc:ZDB-GENE-070620-25]
8. cwc25 ENSDARG00000003382 2134 2.306 - - - - - 0.707 - 0.788 0.811 CWC25 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2817]
9. pnpla7a ENSDARG00000062986 1793 1.866 - 0.867 - 0.999 - - - - - patatin-like phospholipase domain containing 7a [Source:ZFIN;Acc:ZDB-GENE-070112-1812]
10. eif1b ENSDARG00000012688 34711 1.864 0.904 - - 0.960 - - - - - eukaryotic translation initiation factor 1B [Source:ZFIN;Acc:ZDB-GENE-030131-956]
11. EIF1B ENSDARG00000029445 5034 1.833 - - - 0.996 - - - - 0.837 eukaryotic translation initiation factor 1B [Source:HGNC Symbol;Acc:HGNC:30792]
12. SERBP1 SERBP1 9276 1.813 - - - 0.997 - 0.816 - - -
13. CR388095.3 CR388095.3 2548 1.801 - 0.803 - 0.998 - - - - -
14. rerea ENSDARG00000077353 4162 1.789 - - - 0.994 - - - - 0.795 arginine-glutamic acid dipeptide (RE) repeats a [Source:ZFIN;Acc:ZDB-GENE-060718-1]
15. ARHGAP23 ARHGAP23 3946 1.783 - 0.785 - 0.998 - - - - -
16. C3H19orf43 C3H19orf43 2961 1.782 - - - 0.998 - - - 0.784 -
17. amer1 ENSDARG00000079624, ENSDARG00000117033 1370 1.776 0.982 0.794 - - - - - - - APC membrane recruitment protein 1 [Source:ZFIN;Acc:ZDB-GENE-070719-2]
18. EPT1 EPT1 1912 1.769 - 0.770 - 0.999 - - - - -
19. TOM1L2 ENSDARG00000056394 793 1.763 0.976 - - - - - - 0.787 - target of myb1 like 2 membrane trafficking protein [Source:HGNC Symbol;Acc:HGNC:11984]
20. zgc:55733 ENSDARG00000103845 1550 1.752 0.980 - - - - - - 0.772 - zgc:55733 [Source:ZFIN;Acc:ZDB-GENE-040426-791]
21. mark3 mark3 1375 1.746 0.970 0.776 - - - - - - -
22. e2f8 ENSDARG00000057323 1432 1.745 0.940 0.805 - - - - - - - E2F transcription factor 8 [Source:ZFIN;Acc:ZDB-GENE-041111-260]
23. CU929431.1 CU929431.1 2234 1.729 - - - 0.998 - - - 0.731 -
24. spry4 ENSDARG00000068732 2091 1.725 0.970 0.755 - - - - - - - sprouty homolog 4 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-010803-2]
25. insig1 ENSDARG00000010658, ENSDARG00000113413 1811 1.716 0.986 0.730 - - - - - - - insulin induced gene 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6121]
26. nudc ENSDARG00000104837 1798 1.713 - 0.841 - - - - - 0.872 - nudC nuclear distribution protein [Source:ZFIN;Acc:ZDB-GENE-040426-899]
27. acsl3b ENSDARG00000014674 3748 1.709 - - - 0.997 - - - 0.712 - acyl-CoA synthetase long chain family member 3b [Source:ZFIN;Acc:ZDB-GENE-030131-492]
28. zgc:56493 ENSDARG00000031435 33407 1.708 - - - 0.972 - - - - 0.736 zgc:56493 [Source:ZFIN;Acc:ZDB-GENE-030131-8581]
29. cdk8 ENSDARG00000016496, ENSDARG00000110333 3087 1.707 0.925 - - - - - 0.782 - - cyclin-dependent kinase 8 [Source:ZFIN;Acc:ZDB-GENE-030903-2]
30. cul4b ENSDARG00000060510 6053 1.705 - - - 0.993 - - - - 0.712 cullin 4B [Source:ZFIN;Acc:ZDB-GENE-041008-208]
31. camlg ENSDARG00000100409 2157 1.705 0.970 - - - - 0.735 - - - calcium modulating ligand [Source:ZFIN;Acc:ZDB-GENE-040426-2407]
32. gclm ENSDARG00000018953 1712 1.704 0.964 - - - - - - 0.740 - glutamate-cysteine ligase, modifier subunit [Source:ZFIN;Acc:ZDB-GENE-030131-5906]
33. slc25a36a ENSDARG00000038731, ENSDARG00000111673 2008 1.695 0.971 - - - - - - - 0.724 solute carrier family 25 (pyrimidine nucleotide carrier ), member 36a [Source:ZFIN;Acc:ZDB-GENE-040718-415]
34. lmo4b ENSDARG00000054749, ENSDARG00000115402 1397 1.68 0.978 - - - - - - 0.702 - LIM domain only 4b [Source:ZFIN;Acc:ZDB-GENE-030131-3570]
35. psmb1 ENSDARG00000009640 8628 1.679 0.897 - - - - - - - 0.782 proteasome subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-040618-2]
36. QPCT ENSDARG00000089717 1383 1.665 0.853 0.812 - - - - - - - glutaminyl-peptide cyclotransferase [Source:ZFIN;Acc:ZDB-GENE-130827-1]
37. TNPO2 ENSDARG00000042887 2290 1.664 - 0.792 - - - - - - 0.872 transportin 2 [Source:HGNC Symbol;Acc:HGNC:19998]
38. lrrc40 ENSDARG00000017708 1156 1.662 0.937 - - - - - - 0.725 - leucine rich repeat containing 40 [Source:ZFIN;Acc:ZDB-GENE-030131-6062]
39. znrd1 ENSDARG00000036070 684 1.661 - 0.876 - - - - - 0.785 - zinc ribbon domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050320-131]
40. rbm4.3 ENSDARG00000022129 28571 1.66 - - - 0.908 - 0.752 - - - RNA binding motif protein 4.3 [Source:ZFIN;Acc:ZDB-GENE-040426-1938]
41. usp5 ENSDARG00000014517, ENSDARG00000114598 1969 1.657 - 0.872 - - - - - 0.785 - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
42. nedd8 ENSDARG00000007989 3896 1.649 - 0.933 - - - - 0.716 - - neural precursor cell expressed, developmentally down-regulated 8 [Source:ZFIN;Acc:ZDB-GENE-030616-588]
43. slbp ENSDARG00000100558 3405 1.646 - 0.805 - - - - - - 0.841 stem-loop binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-9686]
44. plcg1 ENSDARG00000038442 5324 1.646 - - - - - - - 0.765 0.881 phospholipase C, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-030421-3]
45. ssb ENSDARG00000029252 3394 1.645 - - - - - - - 0.806 0.839 Sjogren syndrome antigen B (autoantigen La) [Source:ZFIN;Acc:ZDB-GENE-030131-223]
46. cul3a ENSDARG00000038967 6155 1.629 - - - - - - 0.831 - 0.798 cullin 3a [Source:ZFIN;Acc:ZDB-GENE-030131-3376]
47. dock7 ENSDARG00000078675 1995 1.629 - 0.773 - - - - - - 0.856 dedicator of cytokinesis 7 [Source:ZFIN;Acc:ZDB-GENE-050302-15]
48. rb1 ENSDARG00000006782 1445 1.628 - 0.856 - - - - - 0.772 - retinoblastoma 1 [Source:ZFIN;Acc:ZDB-GENE-040428-1]
49. e2f4 ENSDARG00000101578, ENSDARG00000109320 1783 1.628 - - - - - - 0.808 0.820 - E2F transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2773]
50. ZNF628 1104 1.626 - 0.886 - - - - - 0.740 - zinc finger protein 628, transcript variant X3
51. mier1a ENSDARG00000041072 1690 1.624 - - - - - - - 0.782 0.842 mesoderm induction early response 1a, transcriptional regulator [Source:ZFIN;Acc:ZDB-GENE-030131-409]
52. smc2 ENSDARG00000017744, ENSDARG00000114076 2271 1.624 - 0.889 - - - - - 0.735 - structural maintenance of chromosomes 2 [Source:ZFIN;Acc:ZDB-GENE-030131-105]
53. ints8 ENSDARG00000057986 1063 1.622 - 0.852 - - - - - - 0.770 integrator complex subunit 8 [Source:ZFIN;Acc:ZDB-GENE-050522-556]
54. snrpd3 ENSDARG00000013800, ENSDARG00000112203 3334 1.621 - 0.798 - - - - - - 0.823 small nuclear ribonucleoprotein D3 polypeptide [Source:ZFIN;Acc:ZDB-GENE-040625-55]
55. si:dkey-19e4.5 ENSDARG00000089886 2562 1.617 - - - - - - - 0.768 0.849 si:dkey-19e4.5 [Source:ZFIN;Acc:ZDB-GENE-030131-1852]
56. hug 4100 1.614 - - - - - 0.746 - - 0.868 HuG, transcript variant X2
57. nup50 ENSDARG00000017454 4425 1.613 - - - - - 0.854 - 0.759 - nucleoporin 50 [Source:ZFIN;Acc:ZDB-GENE-030131-1689]
58. hirip3 ENSDARG00000027749, ENSDARG00000115688 5875 1.608 - - - - - 0.803 - 0.805 - HIRA interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5753]
59. u2af2b ENSDARG00000011740 6946 1.607 - 0.740 - - - - - - 0.867 U2 small nuclear RNA auxiliary factor 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1881]
60. katnb1 ENSDARG00000005456, ENSDARG00000110223, ENSDARG00000116933 630 1.59 - 0.880 - - - - 0.710 - - katanin p80 (WD repeat containing) subunit B 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1954]
61. polr2l ENSDARG00000058349, ENSDARG00000113402 3300 1.585 - - - - - 0.764 - 0.821 - polymerase (RNA) II (DNA directed) polypeptide L [Source:ZFIN;Acc:ZDB-GENE-050522-181]
62. CR352229.2 CR352229.2 784 1.584 - - - - - 0.762 - 0.822 -
63. plagx ENSDARG00000036855 3768 1.584 - - - - - - - 0.741 0.843 pleiomorphic adenoma gene X [Source:ZFIN;Acc:ZDB-GENE-030131-839]
64. N4BP2L1 N4BP2L1 573 1.583 - 0.790 - - - - 0.793 - -
65. clta ENSDARG00000045618, ENSDARG00000115484 11767 1.583 0.860 - - - - 0.723 - - - clathrin, light chain A [Source:ZFIN;Acc:ZDB-GENE-040426-1986]
66. TP53BP1 ENSDARG00000079000 997 1.582 - 0.765 - - - 0.817 - - - tumor protein p53 binding protein, 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3695]
67. ncor1 ENSDARG00000035285, ENSDARG00000113129 4234 1.578 - 0.860 - - - 0.718 - - - nuclear receptor corepressor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-993]
68. ano9a ENSDARG00000076320, ENSDARG00000078941 865 1.576 - 0.728 - - - - - - 0.848 anoctamin 9a [Source:ZFIN;Acc:ZDB-GENE-071004-46]
69. flrt2 ENSDARG00000079355, ENSDARG00000097299, ENSDARG00000116552 1464 1.574 - 0.849 - - - - - - 0.725 fibronectin leucine rich transmembrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-070705-267]
70. zic5 ENSDARG00000016022 1034 1.571 - 0.853 - - - - - 0.718 - zic family member 5 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040622-1]
71. vdac1 ENSDARG00000045132 8051 1.57 - 0.840 - - - - - - 0.730 voltage-dependent anion channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6514]
72. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 1.568 - - - - - - - 0.812 0.756 myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
73. polr2k ENSDARG00000075616 2047 1.562 - - - - - - - 0.770 0.792 polymerase (RNA) II (DNA directed) polypeptide K [Source:ZFIN;Acc:ZDB-GENE-070820-18]
74. pop5 ENSDARG00000053452 1347 1.556 - 0.835 - - - - - 0.721 - POP5 homolog, ribonuclease P/MRP subunit [Source:ZFIN;Acc:ZDB-GENE-050320-123]
75. si:dkey-27i16.3 si:dkey-27i16.3 494 1.554 - 0.839 - - - - 0.715 - -
76. RNF38 ENSDARG00000062055 3901 1.553 - 0.817 - - - 0.736 - - - ring finger protein 38 [Source:ZFIN;Acc:ZDB-GENE-030131-8693]
77. daxx ENSDARG00000000729 734 1.551 - - - - - - - 0.783 0.768 death-domain associated protein [Source:ZFIN;Acc:ZDB-GENE-010110-3]
78. cspg5a ENSDARG00000069981 1699 1.551 - - - - - - - 0.731 0.820 chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
79. TNRC6B ENSDARG00000074161 2464 1.549 - - - - - 0.744 - - 0.805 trinucleotide repeat containing 6b [Source:ZFIN;Acc:ZDB-GENE-030131-13]
80. ftsjd2 ftsjd2 2694 1.545 - 0.768 - - - - - - 0.777
81. pvrl1b 1645 1.545 - 0.811 - - - - - - 0.734 poliovirus receptor-related 1b
82. chd9 ENSDARG00000074498, ENSDARG00000112964 2603 1.543 - - - - - 0.751 - - 0.792 chromodomain helicase DNA binding protein 9 [Source:ZFIN;Acc:ZDB-GENE-030131-497]
83. wif1 ENSDARG00000005541 1689 1.542 - 0.806 - - - - - - 0.736 wnt inhibitory factor 1 [Source:ZFIN;Acc:ZDB-GENE-990712-17]
84. ppt2 ENSDARG00000104542 888 1.538 - - - - - - - 0.747 0.791 palmitoyl-protein thioesterase 2 [Source:ZFIN;Acc:ZDB-GENE-010430-4]
85. FOXO4 ENSDARG00000055792 1457 1.535 - 0.781 - - - - - - 0.754 forkhead box O4 [Source:ZFIN;Acc:ZDB-GENE-150311-1]
86. olig2 ENSDARG00000040946 1405 1.534 - - - - - - - 0.777 0.757 oligodendrocyte lineage transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4013]
87. hnrnpa0b ENSDARG00000036162, ENSDARG00000112653 27740 1.533 - - - - - 0.795 - - 0.738 heterogeneous nuclear ribonucleoprotein A0b [Source:ZFIN;Acc:ZDB-GENE-030131-6154]
88. rpl24 ENSDARG00000099104 65580 1.533 0.769 - - 0.764 - - - - - ribosomal protein L24 [Source:ZFIN;Acc:ZDB-GENE-020419-25]
89. cul5a ENSDARG00000069742, ENSDARG00000112542, ENSDARG00000116292 955 1.529 - 0.822 - - - - - 0.707 - cullin 5a [Source:ZFIN;Acc:ZDB-GENE-030131-5426]
90. qki2 ENSDARG00000010018 2230 1.526 - - - - - 0.780 - 0.746 - QKI, KH domain containing, RNA binding 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1462]
91. LLPH ENSDARG00000055360 1456 1.521 - 0.766 - - - - - 0.755 - LLP homolog, long-term synaptic facilitation factor [Source:ZFIN;Acc:ZDB-GENE-051030-30]
92. CCDC106 CCDC106 1908 1.512 - - - - - - - 0.727 0.785
93. ncapg ENSDARG00000070109, ENSDARG00000109474, ENSDARG00000113314, ENSDARG00000113623 2338 1.511 - 0.748 - - - 0.763 - - - non-SMC condensin I complex, subunit G [Source:ZFIN;Acc:ZDB-GENE-041111-282]
94. kat7 kat7 642 1.509 - 0.806 - - 0.703 - - - -
95. pcnp ENSDARG00000037713 2754 1.508 - 0.737 - - - 0.771 - - - PEST proteolytic signal containing nuclear protein [Source:ZFIN;Acc:ZDB-GENE-041010-130]
96. hnrnpul1 ENSDARG00000040564 6550 1.502 - - - - - - 0.708 0.794 - heterogeneous nuclear ribonucleoprotein U-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2432]
97. eprs ENSDARG00000060494 4729 1.501 - 0.713 - - - - - 0.788 - glutamyl-prolyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-638]
98. zswim5 ENSDARG00000055900 4243 1.493 - - - - - 0.734 - - 0.759 zinc finger, SWIM-type containing 5 [Source:ZFIN;Acc:ZDB-GENE-030925-30]
99. snrka ENSDARG00000070832 1366 1.493 - 0.779 - - - 0.714 - - - SNF related kinase a [Source:ZFIN;Acc:ZDB-GENE-040718-84]
100. ddah2 ENSDARG00000105009 4570 1.493 - 0.769 - - - 0.724 - - - dimethylarginine dimethylaminohydrolase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-913]

There are 1761 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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