Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ubc

Gene Name Gene ID Reads Annotation
ubc ENSDARG00000102632 36050 ubiquitin C [Source:ZFIN;Acc:ZDB-GENE-061110-88]










Genes with expression patterns similar to ubc

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ubc ENSDARG00000102632 36050 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ubiquitin C [Source:ZFIN;Acc:ZDB-GENE-061110-88]
2. ppp2cb ENSDARG00000099241, ENSDARG00000111489 25466 2.569 - - - 0.887 0.838 - - - 0.844 protein phosphatase 2, catalytic subunit, beta isozyme [Source:ZFIN;Acc:ZDB-GENE-040426-2487]
3. hnrnph1l ENSDARG00000005551 8727 2.557 - - - - 0.838 0.824 - - 0.895 heterogeneous nuclear ribonucleoprotein H1, like [Source:ZFIN;Acc:ZDB-GENE-030131-275]
4. fubp1 ENSDARG00000029248 15259 2.422 - - - 0.728 - - - 0.774 0.920 far upstream element (FUSE) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2159]
5. prkar2aa ENSDARG00000033184 14704 2.336 0.800 - - - 0.717 - 0.819 - - protein kinase, cAMP-dependent, regulatory, type II, alpha A [Source:ZFIN;Acc:ZDB-GENE-030131-1007]
6. zgc:77849 ENSDARG00000012458, ENSDARG00000116615 21205 2.245 - - 0.704 - 0.741 0.800 - - - zgc:77849 [Source:ZFIN;Acc:ZDB-GENE-030131-1107]
7. ist1 ENSDARG00000051888 4536 1.899 0.977 - - - - - 0.922 - - increased sodium tolerance 1 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-179]
8. pdlim5b ENSDARG00000027600 4252 1.866 0.975 - - - - - 0.891 - - PDZ and LIM domain 5b [Source:ZFIN;Acc:ZDB-GENE-040426-908]
9. ABHD12B ABHD12B 1877 1.864 0.973 - - - - - 0.891 - -
10. nckap5l ENSDARG00000079148 4227 1.814 0.983 - - - - - - - 0.831 NCK-associated protein 5-like [Source:ZFIN;Acc:ZDB-GENE-090313-304]
11. sf3b4 ENSDARG00000018574 7470 1.77 0.988 - - 0.782 - - - - - splicing factor 3b, subunit 4 [Source:ZFIN;Acc:ZDB-GENE-020419-22]
12. dhx15 ENSDARG00000015392 7496 1.769 0.969 - - - - 0.800 - - - DEAH (Asp-Glu-Ala-His) box helicase 15 [Source:ZFIN;Acc:ZDB-GENE-030131-650]
13. fkbp3 ENSDARG00000098059 5428 1.762 0.970 - - - - 0.792 - - - FK506 binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-030616-419]
14. plscr3b ENSDARG00000069432 8500 1.751 0.966 - - - 0.785 - - - - phospholipid scramblase 3b [Source:ZFIN;Acc:ZDB-GENE-040426-2517]
15. ppapdc1b ppapdc1b 2866 1.751 0.984 - - - - 0.767 - - -
16. ywhaqb ENSDARG00000023323 28138 1.733 0.871 - - - 0.862 - - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide b [Source:ZFIN;Acc:ZDB-GENE-030131-7135]
17. histh1l ENSDARG00000035519 12293 1.729 0.969 0.760 - - - - - - - histone H1 like [Source:ZFIN;Acc:ZDB-GENE-050417-145]
18. srsf7a ENSDARG00000035325, ENSDARG00000110705 11788 1.721 - - - 0.819 0.902 - - - - serine/arginine-rich splicing factor 7a [Source:ZFIN;Acc:ZDB-GENE-040426-1798]
19. grina grina 4656 1.715 0.977 - - - - 0.738 - - -
20. h2afva ENSDARG00000068820 16427 1.707 0.924 - - - - - - - 0.783 H2A histone family, member Va [Source:ZFIN;Acc:ZDB-GENE-020717-1]
21. ostc ENSDARG00000104901 16240 1.707 - - - - - 0.789 0.918 - - oligosaccharyltransferase complex subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1079]
22. ube2i ube2i 13024 1.698 - - - - 0.882 - - - 0.816
23. srsf3b ENSDARG00000059360 14888 1.688 0.958 - - - - 0.730 - - - serine/arginine-rich splicing factor 3b [Source:ZFIN;Acc:ZDB-GENE-071005-2]
24. tm9sf2 ENSDARG00000003866, ENSDARG00000115213 3888 1.686 0.965 - - - - 0.721 - - - transmembrane 9 superfamily member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6302]
25. ywhaz ENSDARG00000032575 15257 1.685 0.949 0.736 - - - - - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide [Source:ZFIN;Acc:ZDB-GENE-030131-8554]
26. arpc4 ENSDARG00000054063 6150 1.683 0.971 - - - - 0.712 - - - actin related protein 2/3 complex, subunit 4 [Source:ZFIN;Acc:ZDB-GENE-010724-9]
27. tfap2c ENSDARG00000040606 4628 1.677 0.965 - - - - 0.712 - - - transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma) [Source:ZFIN;Acc:ZDB-GENE-041212-61]
28. cast ENSDARG00000058693 15565 1.675 0.930 - - - - 0.745 - - - calpastatin [Source:ZFIN;Acc:ZDB-GENE-050810-2]
29. ewsr1b ENSDARG00000020465, ENSDARG00000117011 10260 1.672 - - - - 0.869 0.803 - - - EWS RNA-binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1600]
30. tmod4 ENSDARG00000020890 17436 1.659 0.840 - - - - - 0.819 - - tropomodulin 4 (muscle) [Source:ZFIN;Acc:ZDB-GENE-991019-9]
31. fbxo28 ENSDARG00000027159 9602 1.654 0.950 - - - - 0.704 - - - F-box protein 28 [Source:ZFIN;Acc:ZDB-GENE-030131-4665]
32. btg2 ENSDARG00000020298 6616 1.654 - - - - 0.786 - - - 0.868 B-cell translocation gene 2 [Source:ZFIN;Acc:ZDB-GENE-000210-15]
33. zgc:56493 ENSDARG00000031435 33407 1.646 - - 0.759 - - 0.887 - - - zgc:56493 [Source:ZFIN;Acc:ZDB-GENE-030131-8581]
34. SNRPG ENSDARG00000099667 18697 1.62 0.845 - - 0.775 - - - - - small nuclear ribonucleoprotein polypeptide G [Source:ZFIN;Acc:ZDB-GENE-040912-105]
35. zgc:55558 ENSDARG00000013161, ENSDARG00000111354 1687 1.593 - - - - 0.701 - 0.892 - - zgc:55558 [Source:ZFIN;Acc:ZDB-GENE-040426-740]
36. rrm2_1 ENSDARG00000020711, ENSDARG00000078069 11634 1.593 - - - - 0.764 0.829 - - - ribonucleotide reductase M2 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-25]
37. crk ENSDARG00000055635, ENSDARG00000109497, ENSDARG00000115801 5105 1.592 - - - 0.754 - 0.838 - - - v-crk avian sarcoma virus CT10 oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-040801-148]
38. hnrnpub ENSDARG00000004735 16496 1.59 - - - 0.843 - 0.747 - - - heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
39. tle2 5014 1.573 - - - 0.703 - - - - 0.870 transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila), transcript variant X4
40. spcs1 ENSDARG00000059298 5327 1.567 - - - - - 0.860 - - 0.707 signal peptidase complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-050809-130]
41. ddx5 ENSDARG00000038068 35302 1.559 - - - - 0.851 0.708 - - - DEAD (Asp-Glu-Ala-Asp) box helicase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-925]
42. h3f3d ENSDARG00000045248 43757 1.547 - - - 0.777 - 0.770 - - - H3 histone, family 3D [Source:ZFIN;Acc:ZDB-GENE-040426-1023]
43. nrf1 ENSDARG00000000018 4683 1.541 - - - - 0.725 - - - 0.816 nuclear respiratory factor 1 [Source:ZFIN;Acc:ZDB-GENE-001221-1]
44. h3f3b.1 ENSDARG00000020504, ENSDARG00000068434, ENSDARG00000068436 50840 1.53 0.791 - - 0.739 - - - - - H3 histone, family 3B.1 [Source:ZFIN;Acc:ZDB-GENE-050417-65]
45. igf2bp1 ENSDARG00000061478 22924 1.53 0.701 - - - - 0.829 - - - insulin-like growth factor 2 mRNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060929-1258]
46. MATR3 MATR3 3962 1.523 - - - 0.778 0.745 - - - -
47. pmp22a ENSDARG00000105223, ENSDARG00000115339 9849 1.519 - - - - 0.726 0.793 - - - peripheral myelin protein 22a [Source:ZFIN;Acc:ZDB-GENE-030131-6757]
48. tgif1 ENSDARG00000059337 4020 1.504 - - - - 0.713 0.791 - - - TGFB-induced factor homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030131-475]
49. cnot6 cnot6 7029 1.503 - - - - - 0.733 - - 0.770
50. plxnb1b ENSDARG00000017211 4676 1.5 - - - - 0.727 0.773 - - - plexin b1b [Source:ZFIN;Acc:ZDB-GENE-090812-4]
51. arpc5a ENSDARG00000039142 5482 1.497 - - - - 0.771 0.726 - - - actin related protein 2/3 complex, subunit 5A [Source:ZFIN;Acc:ZDB-GENE-030131-8448]
52. jam3b ENSDARG00000061794 5655 1.475 - - - - - 0.763 - - 0.712 junctional adhesion molecule 3b [Source:ZFIN;Acc:ZDB-GENE-030131-441]
53. rps18 ENSDARG00000100392 64615 1.475 0.728 - - - 0.747 - - - - ribosomal protein S18 [Source:ZFIN;Acc:ZDB-GENE-020419-20]
54. arcn1a ENSDARG00000002792 2847 1.468 - - - - - 0.759 - - 0.709 archain 1a [Source:ZFIN;Acc:ZDB-GENE-021031-2]
55. marcksl1b ENSDARG00000035715 37390 1.46 - - - 0.737 - - - 0.723 - MARCKS-like 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2315]
56. rbm4.3 ENSDARG00000022129 28571 1.457 - - - - - 0.734 - 0.723 - RNA binding motif protein 4.3 [Source:ZFIN;Acc:ZDB-GENE-040426-1938]
57. zfhx4 ENSDARG00000075542 6927 1.453 - - - - 0.717 - - - 0.736 zinc finger homeobox 4 [Source:ZFIN;Acc:ZDB-GENE-070530-3]
58. cnn2 ENSDARG00000035858 18201 1.446 - 0.728 - - - 0.718 - - - calponin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-542]
59. adam10a ENSDARG00000053468 9308 1.442 - - - - - 0.736 - - 0.706 ADAM metallopeptidase domain 10a [Source:ZFIN;Acc:ZDB-GENE-040917-2]
60. CR387996.1 ENSDARG00000097774 3037 1.441 - - - 0.727 0.714 - - - -
61. ywhabl ENSDARG00000040287 39045 1.44 - 0.719 - - - 0.721 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide like [Source:ZFIN;Acc:ZDB-GENE-030131-448]
62. ttk ENSDARG00000041361 3911 1.419 - - - 0.709 - 0.710 - - - ttk protein kinase [Source:ZFIN;Acc:ZDB-GENE-030123-1]
63. mycla ENSDARG00000006003 1866 0.986 0.986 - - - - - - - - MYCL proto-oncogene, bHLH transcription factor a [Source:ZFIN;Acc:ZDB-GENE-040426-2439]
64. ZNF385C ENSDARG00000058154 478 0.986 0.986 - - - - - - - - zinc finger protein 385C [Source:ZFIN;Acc:ZDB-GENE-091112-1]
65. HAUS8 HAUS8 625 0.985 0.985 - - - - - - - -
66. baz1a ENSDARG00000063233, ENSDARG00000099745 563 0.985 0.985 - - - - - - - - bromodomain adjacent to zinc finger domain, 1A [Source:ZFIN;Acc:ZDB-GENE-030131-6105]
67. foxj1b ENSDARG00000088290 343 0.985 0.985 - - - - - - - - forkhead box J1b [Source:ZFIN;Acc:ZDB-GENE-041212-76]
68. CDIP1 ENSDARG00000076118 1294 0.985 0.985 - - - - - - - - cell death-inducing p53 target 1 [Source:ZFIN;Acc:ZDB-GENE-070720-18]
69. rad50 ENSDARG00000038917 1105 0.985 0.985 - - - - - - - - RAD50 homolog, double strand break repair protein [Source:ZFIN;Acc:ZDB-GENE-050506-110]
70. mpp7 mpp7 743 0.985 0.985 - - - - - - - -
71. si:dkey-4c15.19 si:dkey-4c15.19 219 0.985 0.985 - - - - - - - -
72. dync1li1 ENSDARG00000098317 729 0.985 0.985 - - - - - - - - dynein, cytoplasmic 1, light intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4108]
73. hmgcrb ENSDARG00000105206 2080 0.985 0.985 - - - - - - - - 3-hydroxy-3-methylglutaryl-CoA reductase b [Source:ZFIN;Acc:ZDB-GENE-051108-1]
74. CT955984.1 ENSDARG00000113577 1482 0.984 0.984 - - - - - - - -
75. nktr ENSDARG00000059097 1998 0.984 0.984 - - - - - - - - natural killer cell triggering receptor [Source:ZFIN;Acc:ZDB-GENE-030131-1725]
76. lmbr1 ENSDARG00000024092, ENSDARG00000116241 1418 0.984 0.984 - - - - - - - - limb development membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-090128-4]
77. tmeff1b ENSDARG00000056740 11253 0.984 0.984 - - - - - - - - transmembrane protein with EGF-like and two follistatin-like domains 1b [Source:ZFIN;Acc:ZDB-GENE-050706-143]
78. kat2a ENSDARG00000104734 802 0.984 0.984 - - - - - - - - K(lysine) acetyltransferase 2A [Source:ZFIN;Acc:ZDB-GENE-080403-11]
79. ppm1k ENSDARG00000010655 1285 0.984 0.984 - - - - - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1K [Source:ZFIN;Acc:ZDB-GENE-050306-8]
80. dhrs7c dhrs7c 1173 0.984 0.984 - - - - - - - -
81. lin52 ENSDARG00000070833 2271 0.984 0.984 - - - - - - - - lin-52 DREAM MuvB core complex component [Source:ZFIN;Acc:ZDB-GENE-061110-82]
82. znf143b ENSDARG00000041581, ENSDARG00000111018, ENSDARG00000112408 1140 0.984 0.984 - - - - - - - - zinc finger protein 143b [Source:ZFIN;Acc:ZDB-GENE-040426-1586]
83. stk25a ENSDARG00000002210 372 0.984 0.984 - - - - - - - - serine/threonine kinase 25a [Source:ZFIN;Acc:ZDB-GENE-041010-92]
84. gtf2a1 ENSDARG00000011000 2026 0.984 0.984 - - - - - - - - general transcription factor IIA, 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2694]
85. zgc:114130 ENSDARG00000040725, ENSDARG00000116854 806 0.984 0.984 - - - - - - - - zgc:114130 [Source:ZFIN;Acc:ZDB-GENE-050913-48]
86. nxf1 ENSDARG00000055076 3251 0.983 0.983 - - - - - - - - nuclear RNA export factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2585]
87. cx35.4 ENSDARG00000042866 685 0.983 0.983 - - - - - - - - connexin 35.4 [Source:ZFIN;Acc:ZDB-GENE-050417-174]
88. zfand5b ENSDARG00000002271 4145 0.983 0.983 - - - - - - - - zinc finger, AN1-type domain 5b [Source:ZFIN;Acc:ZDB-GENE-040426-875]
89. pon2 ENSDARG00000016856 1382 0.983 0.983 - - - - - - - - paraoxonase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7116]
90. NUAK1_1 NUAK1_1 1782 0.983 0.983 - - - - - - - -
91. mpi ENSDARG00000030786 3052 0.983 0.983 - - - - - - - - mannose phosphate isomerase [Source:ZFIN;Acc:ZDB-GENE-050904-6]
92. qpctla ENSDARG00000061691 869 0.983 0.983 - - - - - - - - glutaminyl-peptide cyclotransferase-like a [Source:ZFIN;Acc:ZDB-GENE-030131-1441]
93. adkb ENSDARG00000095947 990 0.983 0.983 - - - - - - - - adenosine kinase b [Source:ZFIN;Acc:ZDB-GENE-030131-948]
94. sas sas 1783 0.982 0.982 - - - - - - - -
95. rab14 ENSDARG00000074246 4084 0.982 0.982 - - - - - - - - RAB14, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030826-20]
96. ppp1cc 2361 0.982 0.982 - - - - - - - - protein phosphatase 1, catalytic subunit, gamma isozyme
97. syf2 ENSDARG00000004706 2463 0.982 0.982 - - - - - - - - SYF2 pre-mRNA-splicing factor [Source:ZFIN;Acc:ZDB-GENE-040801-170]
98. ivd ENSDARG00000042853, ENSDARG00000112920 1526 0.982 0.982 - - - - - - - - isovaleryl-CoA dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030616-262]
99. C17H14orf166 C17H14orf166 1553 0.982 0.982 - - - - - - - -
100. FAM210B ENSDARG00000052638 1755 0.982 0.982 - - - - - - - - family with sequence similarity 210, member B [Source:ZFIN;Acc:ZDB-GENE-050913-122]

There are 677 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA