Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ubb

Gene Name Gene ID Reads Annotation
ubb ENSDARG00000093313, ENSDARG00000112953 4 ubiquitin B [Source:ZFIN;Acc:ZDB-GENE-050411-10]










Genes with expression patterns similar to ubb

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ubb ENSDARG00000093313, ENSDARG00000112953 4 4 - 1.000 - 1.000 1.000 - - - 1.000 ubiquitin B [Source:ZFIN;Acc:ZDB-GENE-050411-10]
2. FP103003.1_1 FP103003.1_1 6 2.818 - - - 0.818 1.000 - - - 1.000
3. CABZ01056274.1 CABZ01056274.1 3 2 - - - - 1.000 - - - 1.000
4. ZCCHC6 2 2 - - - - 1.000 - - - 1.000 zinc finger, CCHC domain containing 6
5. wisp2 ENSDARG00000077882 3 2 - - - - 1.000 - - - 1.000 WNT1 inducible signaling pathway protein 2 [Source:ZFIN;Acc:ZDB-GENE-060223-1]
6. CT030048.2 CT030048.2 3 2 - - - - 1.000 - - - 1.000
7. VASH1 ENSDARG00000092716 33 1.94 - 0.940 - - 1.000 - - - - vasohibin 1 [Source:HGNC Symbol;Acc:HGNC:19964]
8. megf8_2 ENSDARG00000079751, ENSDARG00000103934 32 1.94 - 0.940 - - 1.000 - - - - multiple EGF-like-domains 8 [Source:ZFIN;Acc:ZDB-GENE-090730-1]
9. SSTR2 SSTR2 12 1.94 - 0.940 - - - - - - 1.000
10. si:ch211-89o5.3 si:ch211-89o5.3 5 1.923 - 0.923 - - - - - - 1.000
11. CABZ01112732.1 ENSDARG00000068453 4 1.821 - - - - 0.821 - - - 1.000 tripartite motif-containing protein 14-like [Source:NCBI gene;Acc:100329480]
12. CCDC18 ENSDARG00000078822 5 1.818 - - - 0.818 - - - - 1.000 coiled-coil domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-030131-5414]
13. HMGXB3 ENSDARG00000077823 2 1.818 - - - 0.818 - - - - 1.000 HMG box domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-111012-1]
14. IL4I1 IL4I1 4 1.811 - - - - 1.000 - - - 0.811
15. zgc:171318 zgc:171318 42 1.781 - 0.781 - - 1.000 - - - -
16. si:ch211-218d20.10 si:ch211-218d20.10 4 1 - - - - 1.000 - - - -
17. si:ch211-215l11.8 si:ch211-215l11.8 0 1 - - - - - - - - 1.000
18. iffo1a ENSDARG00000062976 5 1 - - - - 1.000 - - - - intermediate filament family orphan 1a [Source:ZFIN;Acc:ZDB-GENE-060503-418]
19. BX119910.4 BX119910.4 0 1 - - - - - - - - 1.000
20. ftr73 ENSDARG00000095298 1 1 - - - - 1.000 - - - - finTRIM family, member 73 [Source:ZFIN;Acc:ZDB-GENE-090508-13]
21. si:ch211-214p13.7 1 1 - - - - - - - - 1.000 si:ch211-214p13.7
22. zgc:165627 zgc:165627 4 1 - - - - 1.000 - - - -
23. or125-2 ENSDARG00000094714 0 1 - - - - 1.000 - - - - odorant receptor, family E, subfamily 125, member 2 [Source:ZFIN;Acc:ZDB-GENE-070806-92]
24. eif3bb ENSDARG00000074213 2 1 - - - - 1.000 - - - - eukaryotic translation initiation factor 3, subunit Bb [Source:ZFIN;Acc:ZDB-GENE-090312-175]
25. wnt8a ENSDARG00000052910, ENSDARG00000078507 0 1 - - - - 1.000 - - - - wingless-type MMTV integration site family, member 8a [Source:ZFIN;Acc:ZDB-GENE-980526-332]
26. socs1a ENSDARG00000038095 20 1 - - - - 1.000 - - - - suppressor of cytokine signaling 1a [Source:ZFIN;Acc:ZDB-GENE-040801-205]
27. FNDC7_2 FNDC7_2 18 1 - - - - 1.000 - - - -
28. ddhd1b ENSDARG00000037042, ENSDARG00000111543, ENSDARG00000113512 12 1 - - - - 1.000 - - - - DDHD domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-040724-18]
29. si:dkey-220o10.3 si:dkey-220o10.3 0 1 - - - - - - - - 1.000
30. si:ch73-177h5.2 ENSDARG00000020812 0 1 - - - - - - - - 1.000 si:ch73-177h5.2 [Source:ZFIN;Acc:ZDB-GENE-081104-247]
31. osmr ENSDARG00000100738 2 1 - - - - 1.000 - - - - oncostatin M receptor [Source:ZFIN;Acc:ZDB-GENE-060526-48]
32. CABZ01019904.1 ENSDARG00000104193 6 1 - - - - 1.000 - - - -
33. MRC2 ENSDARG00000078135, ENSDARG00000111490 10 1 - - - - 1.000 - - - - mannose receptor, C type 2 [Source:ZFIN;Acc:ZDB-GENE-090915-5]
34. CABZ01081747.2 CABZ01081747.2 9 1 - - - - - - - - 1.000
35. CABZ01112877.1 CABZ01112877.1 2 1 - - - - 1.000 - - - -
36. slc15a1b ENSDARG00000044528 6 1 - - - - - - - - 1.000 solute carrier family 15 (oligopeptide transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4661]
37. cnn1b ENSDARG00000102398 40 1 - - - - 1.000 - - - - calponin 1, basic, smooth muscle, b [Source:ZFIN;Acc:ZDB-GENE-091118-54]
38. BX324198.1 BX324198.1 12 1 - - - - 1.000 - - - -
39. CR848025.1 ENSDARG00000100501 35 1 - - - - 1.000 - - - - si:dkey-202l22.4 [Source:NCBI gene;Acc:101882714]
40. scn1a 8 1 - - - - - - - - 1.000 sodium channel, voltage-gated, type I, alpha, transcript variant X1
41. dcp2_1 ENSDARG00000104242 74 1 - - - - - - - - 1.000 decapping mRNA 2 [Source:ZFIN;Acc:ZDB-GENE-040426-851]
42. si:dkey-115f9.3 7 1 - - - - 1.000 - - - - si:dkey-115f9.3, transcript variant X2
43. si:dkey-149m13.2 si:dkey-149m13.2 1 1 - - - - - - - - 1.000
44. fam19a1 7 1 - - - - 1.000 - - - - family with sequence similarity 19 member A1, C-C motif chemokine like, transcript variant X5
45. ZSWIM2 ENSDARG00000075700 8 1 - - - - 1.000 - - - - zinc finger, SWIM-type containing 2 [Source:ZFIN;Acc:ZDB-GENE-070719-8]
46. si:ch211-106h4.5 ENSDARG00000095059 1 1 - - - - 1.000 - - - - si:ch211-106h4.5 [Source:ZFIN;Acc:ZDB-GENE-070705-15]
47. zgc:158321 zgc:158321 1 1 - - - - 1.000 - - - -
48. skila ENSDARG00000023933 2 1 - - - - - - - - 1.000 SKI-like proto-oncogene a [Source:ZFIN;Acc:ZDB-GENE-070912-548]
49. ghrhr2 ENSDARG00000099218, ENSDARG00000113154 1 1 - - - - 1.000 - - - - growth hormone releasing hormone receptor 2 [Source:ZFIN;Acc:ZDB-GENE-121214-194]
50. si:ch211-12e13.12 ENSDARG00000094737 1 1 - - - - - - - - 1.000 si:ch211-12e13.12 [Source:ZFIN;Acc:ZDB-GENE-070424-121]
51. zgc:172323 ENSDARG00000053201 1 1 - - - - - - - - 1.000 zgc:172323 [Source:ZFIN;Acc:ZDB-GENE-080204-113]
52. slc5a5 ENSDARG00000005392 6 1 - - - - - - - - 1.000 solute carrier family 5 (sodium/iodide cotransporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-060503-585]
53. si:ch211-198e13.3 5 1 - - - - - - - - 1.000 si:ch211-198e13.3, transcript variant X1
54. FP102016.2 FP102016.2 0 1 - - - - - - - - 1.000
55. rhbdd3 ENSDARG00000079816 2 1 - - - - - - - - 1.000 rhomboid domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070705-39]
56. ftr03 8 1 - - - - 1.000 - - - - finTRIM family, member 3
57. CR394568.1 CR394568.1 0 1 - - - - - - - - 1.000
58. si:ch73-341k19.1 ENSDARG00000095946 5 1 - - - - - - - - 1.000 si:ch73-341k19.1 [Source:ZFIN;Acc:ZDB-GENE-110411-201]
59. asip asip 2 1 - - - - 1.000 - - - -
60. ca7 ENSDARG00000045139, ENSDARG00000113549 1 1 - - - - 1.000 - - - - carbonic anhydrase VII [Source:ZFIN;Acc:ZDB-GENE-040426-1786]
61. BX321870.1 ENSDARG00000098519 9 1 - - - - - - - - 1.000
62. apnl ENSDARG00000090900 21 1 - - - - 1.000 - - - - actinoporin-like protein [Source:ZFIN;Acc:ZDB-GENE-030131-8907]
63. PDE6H 3 1 - - - - - - - - 1.000 phosphodiesterase 6H, cGMP-specific, cone, gamma, transcript variant 2
64. si:dkey-6n3.3 si:dkey-6n3.3 9 1 - - - - - - - - 1.000
65. BX927130.1 ENSDARG00000099328 7 1 - - - - - - - - 1.000 si:dkey-27n6.5 [Source:NCBI gene;Acc:557869]
66. si:ch211-196n4.2 si:ch211-196n4.2 0 1 - - - - - - - - 1.000
67. PTGR1 ENSDARG00000024877, ENSDARG00000115676 6 1 - - - - 1.000 - - - - prostaglandin reductase 1 [Source:ZFIN;Acc:ZDB-GENE-041212-80]
68. si:dkey-284p5.3 ENSDARG00000095638 4 1 - - - - 1.000 - - - - si:dkey-284p5.3 [Source:ZFIN;Acc:ZDB-GENE-060503-352]
69. SMC1B ENSDARG00000014402 0 1 - - - - 1.000 - - - - structural maintenance of chromosomes 1B [Source:ZFIN;Acc:ZDB-GENE-091217-1]
70. si:ch1073-109g21.1 si:ch1073-109g21.1 0 1 - - - - - - - - 1.000
71. fam219b ENSDARG00000104637 3 1 - - - - 1.000 - - - - family with sequence similarity 219, member B [Source:ZFIN;Acc:ZDB-GENE-050327-82]
72. ush2a ENSDARG00000029482 10 1 - - - - 1.000 - - - - Usher syndrome 2A (autosomal recessive, mild) [Source:ZFIN;Acc:ZDB-GENE-060503-794]
73. si:dkey-31f5.8 ENSDARG00000094428 2 1 - - - - 1.000 - - - - si:dkey-31f5.8 [Source:ZFIN;Acc:ZDB-GENE-041210-182]
74. CDR2_1 CDR2_1 8 1 - - - - - - - - 1.000
75. GGT5 GGT5 1 1 - - - - - - - - 1.000
76. gna15.4 ENSDARG00000071416 2 1 - - - - 1.000 - - - - guanine nucleotide binding protein (G protein), alpha 15 (Gq class), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-050208-781]
77. si:ch211-278p9.3 ENSDARG00000094098 0 1 - - - - - - - - 1.000 si:ch211-278p9.3 [Source:ZFIN;Acc:ZDB-GENE-081028-38]
78. AL929092.1_1 ENSDARG00000092217 3 1 - - - - 1.000 - - - -
79. si:ch211-251p5.6 si:ch211-251p5.6 0 1 - - - - 1.000 - - - -
80. CNGB3 CNGB3 7 1 - - - - - - - - 1.000
81. si:dkey-106c17.2 ENSDARG00000094994, ENSDARG00000098530 14 1 - - - - 1.000 - - - - si:dkey-106c17.2 [Source:ZFIN;Acc:ZDB-GENE-060503-612]
82. DNAJC11 1 1 - - - - - - - - 1.000 DnaJ heat shock protein family (Hsp40) member C11
83. si:dkey-161j23.5 ENSDARG00000094441 11 1 - - - - 1.000 - - - - si:dkey-161j23.5 [Source:ZFIN;Acc:ZDB-GENE-091204-373]
84. NOTCH2NL NOTCH2NL 5 1 - - - - 1.000 - - - -
85. lifra ENSDARG00000098857 11 1 - - - - - - - - 1.000 leukemia inhibitory factor receptor alpha a [Source:ZFIN;Acc:ZDB-GENE-050327-16]
86. si:ch211-233m11.1 ENSDARG00000074653 1 1 - - - - - - - - 1.000 si:ch211-233m11.1 [Source:ZFIN;Acc:ZDB-GENE-081028-16]
87. PLA2G4C_1 PLA2G4C_1 2 1 - - - - - - - - 1.000
88. si:dkey-176f19.7 ENSDARG00000103348 10 1 - - - - - - - - 1.000 si:dkey-176f19.7 [Source:ZFIN;Acc:ZDB-GENE-110913-130]
89. si:zfos-979f1.2 ENSDARG00000011652 24 1 - - - - - - - - 1.000 si:zfos-979f1.2 [Source:ZFIN;Acc:ZDB-GENE-091204-441]
90. FAM46D FAM46D 0 1 - - - - - - - - 1.000
91. FJX1 ENSDARG00000035873 22 1 - - - - - - - - 1.000 four jointed box 1 [Source:ZFIN;Acc:ZDB-GENE-100422-10]
92. SYNPR ENSDARG00000037587 20 1 - - - - 1.000 - - - - synaptoporin [Source:HGNC Symbol;Acc:HGNC:16507]
93. BRINP1 ENSDARG00000078302 0 1 - - - - 1.000 - - - - bone morphogenetic protein/retinoic acid inducible neural-specific 1 [Source:ZFIN;Acc:ZDB-GENE-130530-847]
94. DSEL DSEL 1 1 - - - - - - - - 1.000
95. itga6l ENSDARG00000056018 1 1 - - - - 1.000 - - - - integrin, alpha 6, like [Source:ZFIN;Acc:ZDB-GENE-040914-57]
96. CYP27A1_2 CYP27A1_2 5 1 - - - - - - - - 1.000
97. si:ch211-227e10.2 ENSDARG00000100414 1 1 - - - - 1.000 - - - - si:ch211-227e10.2 [Source:ZFIN;Acc:ZDB-GENE-050419-8]
98. SHISA7 SHISA7 1 1 - - - - 1.000 - - - -
99. or111-9 ENSDARG00000092238 0 1 - - - - 1.000 - - - - odorant receptor, family D, subfamily 111, member 9 [Source:ZFIN;Acc:ZDB-GENE-010308-11]
100. si:dkeyp-51f11.3 si:dkeyp-51f11.3 0 1 - - - - - - - - 1.000

There are 650 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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