Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ubb

Gene Name Gene ID Reads Annotation
ubb ENSDARG00000093313, ENSDARG00000112953 4 ubiquitin B [Source:ZFIN;Acc:ZDB-GENE-050411-10]










Genes with expression patterns similar to ubb

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ubb ENSDARG00000093313, ENSDARG00000112953 4 4 - 1.000 - 1.000 1.000 - - - 1.000 ubiquitin B [Source:ZFIN;Acc:ZDB-GENE-050411-10]
2. FP103003.1_1 FP103003.1_1 6 2.818 - - - 0.818 1.000 - - - 1.000
3. CT030048.2 CT030048.2 3 2 - - - - 1.000 - - - 1.000
4. CABZ01056274.1 CABZ01056274.1 3 2 - - - - 1.000 - - - 1.000
5. ZCCHC6 2 2 - - - - 1.000 - - - 1.000 zinc finger, CCHC domain containing 6
6. wisp2 ENSDARG00000077882 3 2 - - - - 1.000 - - - 1.000 WNT1 inducible signaling pathway protein 2 [Source:ZFIN;Acc:ZDB-GENE-060223-1]
7. megf8_2 ENSDARG00000079751, ENSDARG00000103934 32 1.94 - 0.940 - - 1.000 - - - - multiple EGF-like-domains 8 [Source:ZFIN;Acc:ZDB-GENE-090730-1]
8. SSTR2 SSTR2 12 1.94 - 0.940 - - - - - - 1.000
9. VASH1 ENSDARG00000092716 33 1.94 - 0.940 - - 1.000 - - - - vasohibin 1 [Source:HGNC Symbol;Acc:HGNC:19964]
10. si:ch211-89o5.3 si:ch211-89o5.3 5 1.923 - 0.923 - - - - - - 1.000
11. CABZ01112732.1 ENSDARG00000068453 4 1.821 - - - - 0.821 - - - 1.000 tripartite motif-containing protein 14-like [Source:NCBI gene;Acc:100329480]
12. HMGXB3 ENSDARG00000077823 2 1.818 - - - 0.818 - - - - 1.000 HMG box domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-111012-1]
13. CCDC18 ENSDARG00000078822 5 1.818 - - - 0.818 - - - - 1.000 coiled-coil domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-030131-5414]
14. IL4I1 IL4I1 4 1.811 - - - - 1.000 - - - 0.811
15. zgc:171318 zgc:171318 42 1.781 - 0.781 - - 1.000 - - - -
16. BX005256.5 BX005256.5 25 1 - - - - 1.000 - - - -
17. KIAA0319 KIAA0319 2 1 - - - - - - - - 1.000
18. FP102016.2 FP102016.2 0 1 - - - - - - - - 1.000
19. MEI1 MEI1 2 1 - - - - - - - - 1.000
20. si:ch211-218d20.10 si:ch211-218d20.10 4 1 - - - - 1.000 - - - -
21. SLCO2B1 ENSDARG00000054609 0 1 - - - - - - - - 1.000 solute carrier organic anion transporter family, member 2B1 [Source:ZFIN;Acc:ZDB-GENE-051023-6]
22. zgc:92161 ENSDARG00000101749 27 1 - - - - - - - - 1.000 zgc:92161 [Source:ZFIN;Acc:ZDB-GENE-040912-22]
23. BX119910.4 BX119910.4 0 1 - - - - - - - - 1.000
24. si:rp71-7l19.6 si:rp71-7l19.6 12 1 - - - - - - - - 1.000
25. CABZ01089223.1 CABZ01089223.1 0 1 - - - - 1.000 - - - -
26. CABZ01074669.1 CABZ01074669.1 12 1 - - - - - - - - 1.000
27. asip asip 2 1 - - - - 1.000 - - - -
28. CT027705.3 CT027705.3 9 1 - - - - 1.000 - - - -
29. CT737184.1 ENSDARG00000102726 0 1 - - - - - - - - 1.000
30. cdc14aa ENSDARG00000013858 18 1 - - - - - - - - 1.000 cell division cycle 14Aa [Source:ZFIN;Acc:ZDB-GENE-040426-1214]
31. BX927130.1 ENSDARG00000099328 7 1 - - - - - - - - 1.000 si:dkey-27n6.5 [Source:NCBI gene;Acc:557869]
32. CNGA1 3 1 - - - - 1.000 - - - - cyclic nucleotide gated channel alpha 1
33. si:ch1073-109g21.1 si:ch1073-109g21.1 0 1 - - - - - - - - 1.000
34. sstr3 ENSDARG00000014477 14 1 - - - - 1.000 - - - - somatostatin receptor 3 [Source:ZFIN;Acc:ZDB-GENE-061009-35]
35. htr5al htr5al 6 1 - - - - - - - - 1.000
36. si:dkey-149m13.2 si:dkey-149m13.2 1 1 - - - - - - - - 1.000
37. slc15a1b ENSDARG00000044528 6 1 - - - - - - - - 1.000 solute carrier family 15 (oligopeptide transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4661]
38. CR318624.1 ENSDARG00000094618 5 1 - - - - - - - - 1.000
39. si:dkey-14d8.1 ENSDARG00000095332 11 1 - - - - - - - - 1.000 si:dkey-14d8.1 [Source:ZFIN;Acc:ZDB-GENE-041210-86]
40. zgc:153654 ENSDARG00000060322 9 1 - - - - 1.000 - - - - zgc:153654 [Source:ZFIN;Acc:ZDB-GENE-060929-1102]
41. si:ch211-254p10.2 ENSDARG00000056750 3 1 - - - - - - - - 1.000 si:ch211-254p10.2 [Source:ZFIN;Acc:ZDB-GENE-100922-17]
42. DHDH DHDH 15 1 - - - - 1.000 - - - -
43. PTGR1 ENSDARG00000024877, ENSDARG00000115676 6 1 - - - - 1.000 - - - - prostaglandin reductase 1 [Source:ZFIN;Acc:ZDB-GENE-041212-80]
44. cyp2n13 ENSDARG00000042953 10 1 - - - - - - - - 1.000 cytochrome P450, family 2, subfamily N, polypeptide 13 [Source:ZFIN;Acc:ZDB-GENE-041001-158]
45. CABZ01030692.1 CABZ01030692.1 0 1 - - - - - - - - 1.000
46. AL935125.1 AL935125.1 0 1 - - - - 1.000 - - - -
47. crispld1a ENSDARG00000077275 7 1 - - - - 1.000 - - - - cysteine-rich secretory protein LCCL domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-090612-1]
48. si:dkey-167k11.1 si:dkey-167k11.1 14 1 - - - - 1.000 - - - -
49. scn1a 8 1 - - - - - - - - 1.000 sodium channel, voltage-gated, type I, alpha, transcript variant X1
50. CU302316.1 ENSDARG00000109600 2 1 - - - - - - - - 1.000
51. U4_1 U4_1 2 1 - - - - 1.000 - - - -
52. si:dkey-179k24.6 si:dkey-179k24.6 5 1 - - - - - - - - 1.000
53. FNDC3B FNDC3B 2 1 - - - - 1.000 - - - -
54. fam19a1 7 1 - - - - 1.000 - - - - family with sequence similarity 19 member A1, C-C motif chemokine like, transcript variant X5
55. ptger2a ENSDARG00000011434 6 1 - - - - - - - - 1.000 prostaglandin E receptor 2a (subtype EP2) [Source:ZFIN;Acc:ZDB-GENE-040426-1321]
56. ghrhr2 ENSDARG00000099218, ENSDARG00000113154 1 1 - - - - 1.000 - - - - growth hormone releasing hormone receptor 2 [Source:ZFIN;Acc:ZDB-GENE-121214-194]
57. CDR2_1 CDR2_1 8 1 - - - - - - - - 1.000
58. ttc6 ENSDARG00000104125 7 1 - - - - - - - - 1.000 tetratricopeptide repeat domain 6 [Source:ZFIN;Acc:ZDB-GENE-090429-2]
59. si:ch211-251p5.6 si:ch211-251p5.6 0 1 - - - - 1.000 - - - -
60. apnl ENSDARG00000090900 21 1 - - - - 1.000 - - - - actinoporin-like protein [Source:ZFIN;Acc:ZDB-GENE-030131-8907]
61. abcc13 ENSDARG00000062519 2 1 - - - - 1.000 - - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 13 [Source:ZFIN;Acc:ZDB-GENE-050517-26]
62. si:dkey-188i13.8 ENSDARG00000092725 1 1 - - - - - - - - 1.000 si:dkey-188i13.8 [Source:ZFIN;Acc:ZDB-GENE-090312-93]
63. si:dkey-274m14.3 si:dkey-274m14.3 7 1 - - - - - - - - 1.000
64. mybpc2a ENSDARG00000030157 11 1 - - - - - - - - 1.000 myosin binding protein C, fast type a [Source:ZFIN;Acc:ZDB-GENE-060901-1]
65. CU856681.1 CU856681.1 7 1 - - - - 1.000 - - - -
66. PDE6H 3 1 - - - - - - - - 1.000 phosphodiesterase 6H, cGMP-specific, cone, gamma, transcript variant 2
67. NPM2 NPM2 41 1 - - - - - - - - 1.000
68. si:ch211-198e13.3 5 1 - - - - - - - - 1.000 si:ch211-198e13.3, transcript variant X1
69. LIX1 ENSDARG00000052154 9 1 - - - - - - - - 1.000 limb and CNS expressed 1 [Source:ZFIN;Acc:ZDB-GENE-060526-123]
70. si:ch211-214p13.7 1 1 - - - - - - - - 1.000 si:ch211-214p13.7
71. si:dkey-150h13.1 si:dkey-150h13.1 1 1 - - - - - - - - 1.000
72. C17H8orf74 C17H8orf74 4 1 - - - - - - - - 1.000
73. SYNPR ENSDARG00000037587 20 1 - - - - 1.000 - - - - synaptoporin [Source:HGNC Symbol;Acc:HGNC:16507]
74. vcam1a ENSDARG00000078201 1 1 - - - - - - - - 1.000 vascular cell adhesion molecule 1a [Source:ZFIN;Acc:ZDB-GENE-060503-172]
75. zgc:162724 zgc:162724 9 1 - - - - - - - - 1.000
76. slc18a2 ENSDARG00000015110, ENSDARG00000115207 6 1 - - - - - - - - 1.000 solute carrier family 18 (vesicular monoamine transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-080514-1]
77. si:dkey-4j21.1 17 1 - - - - - - - - 1.000 si:dkey-4j21.1, transcript variant X2
78. ca7 ENSDARG00000045139, ENSDARG00000113549 1 1 - - - - 1.000 - - - - carbonic anhydrase VII [Source:ZFIN;Acc:ZDB-GENE-040426-1786]
79. agtr1a ENSDARG00000018616 1 1 - - - - - - - - 1.000 angiotensin II receptor, type 1a [Source:ZFIN;Acc:ZDB-GENE-070912-546]
80. CDK18 ENSDARG00000012204 5 1 - - - - - - - - 1.000 cyclin dependent kinase 18 [Source:HGNC Symbol;Acc:HGNC:8751]
81. slc47a2 2 1 - - - - - - - - 1.000 solute carrier family 47 (multidrug and toxin extrusion), member 2
82. si:ch73-341k19.1 ENSDARG00000095946 5 1 - - - - - - - - 1.000 si:ch73-341k19.1 [Source:ZFIN;Acc:ZDB-GENE-110411-201]
83. clec3ba ENSDARG00000076541 3 1 - - - - - - - - 1.000 C-type lectin domain family 3, member Ba [Source:ZFIN;Acc:ZDB-GENE-110411-71]
84. zgc:158321 zgc:158321 1 1 - - - - 1.000 - - - -
85. guca1a ENSDARG00000010454 9 1 - - - - 1.000 - - - - guanylate cyclase activator 1A [Source:ZFIN;Acc:ZDB-GENE-011128-5]
86. si:dkey-85n7.7 ENSDARG00000095893 0 1 - - - - 1.000 - - - - si:dkey-85n7.7 [Source:ZFIN;Acc:ZDB-GENE-110408-52]
87. CABZ01112877.1 CABZ01112877.1 2 1 - - - - 1.000 - - - -
88. CU467982.1 CU467982.1 12 1 - - - - - - - - 1.000
89. FNDC7_2 FNDC7_2 18 1 - - - - 1.000 - - - -
90. AL929092.1_1 ENSDARG00000092217 3 1 - - - - 1.000 - - - -
91. ldlrap1b ENSDARG00000039750 2 1 - - - - - - - - 1.000 low density lipoprotein receptor adaptor protein 1b [Source:ZFIN;Acc:ZDB-GENE-070112-1012]
92. si:ch73-115f13.1 si:ch73-115f13.1 15 1 - - - - 1.000 - - - -
93. CABZ01084323.1 ENSDARG00000104937 5 1 - - - - 1.000 - - - - protein tyrosine phosphatase, receptor type D [Source:NCBI gene;Acc:100330629]
94. FJX1 ENSDARG00000035873 22 1 - - - - - - - - 1.000 four jointed box 1 [Source:ZFIN;Acc:ZDB-GENE-100422-10]
95. zgc:194659 ENSDARG00000079347 17 1 - - - - 1.000 - - - - zgc:194659 [Source:ZFIN;Acc:ZDB-GENE-081022-139]
96. RBM11 ENSDARG00000090202 15 1 - - - - 1.000 - - - - RNA binding motif protein 11 [Source:ZFIN;Acc:ZDB-GENE-091204-317]
97. foxa_1 ENSDARG00000087094, ENSDARG00000110743, ENSDARG00000115019 1 1 - - - - 1.000 - - - - forkhead box A sequence [Source:ZFIN;Acc:ZDB-GENE-990415-76]
98. skila ENSDARG00000023933 2 1 - - - - - - - - 1.000 SKI-like proto-oncogene a [Source:ZFIN;Acc:ZDB-GENE-070912-548]
99. mir30b 4 1 - - - - 1.000 - - - - microRNA 30b
100. otogl ENSDARG00000088750 2 1 - - - - 1.000 - - - - otogelin-like [Source:ZFIN;Acc:ZDB-GENE-050419-93]

There are 650 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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