Zebrafish data search
Results for ubb
| Gene Name | Gene ID | Reads | Annotation |
|---|---|---|---|
| ubb | ENSDARG00000093313, ENSDARG00000112953 | 4 | ubiquitin B [Source:ZFIN;Acc:ZDB-GENE-050411-10] |
Genes with expression patterns similar to ubb
| Nr. | Gene Name | Gene ID | Reads | Σ scores | 28hpf trunk1 | 28hpf trunk2 | 28hpf whole1 | 28hpf whole2 | 28hpf whole3 PA | 40hpf trunk1 | 40hpf trunk2 | 40hpf whole embryo1 | 40hpf whole embryo2 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | ubb | ENSDARG00000093313, ENSDARG00000112953 | 4 | 4 | - | 1.000 | - | 1.000 | 1.000 | - | - | - | 1.000 | ubiquitin B [Source:ZFIN;Acc:ZDB-GENE-050411-10] |
| 2. | FP103003.1_1 | FP103003.1_1 | 6 | 2.818 | - | - | - | 0.818 | 1.000 | - | - | - | 1.000 | |
| 3. | CABZ01056274.1 | CABZ01056274.1 | 3 | 2 | - | - | - | - | 1.000 | - | - | - | 1.000 | |
| 4. | ZCCHC6 | 2 | 2 | - | - | - | - | 1.000 | - | - | - | 1.000 | zinc finger, CCHC domain containing 6 | |
| 5. | CT030048.2 | CT030048.2 | 3 | 2 | - | - | - | - | 1.000 | - | - | - | 1.000 | |
| 6. | wisp2 | ENSDARG00000077882 | 3 | 2 | - | - | - | - | 1.000 | - | - | - | 1.000 | WNT1 inducible signaling pathway protein 2 [Source:ZFIN;Acc:ZDB-GENE-060223-1] |
| 7. | SSTR2 | SSTR2 | 12 | 1.94 | - | 0.940 | - | - | - | - | - | - | 1.000 | |
| 8. | VASH1 | ENSDARG00000092716 | 33 | 1.94 | - | 0.940 | - | - | 1.000 | - | - | - | - | vasohibin 1 [Source:HGNC Symbol;Acc:HGNC:19964] |
| 9. | megf8_2 | ENSDARG00000079751, ENSDARG00000103934 | 32 | 1.94 | - | 0.940 | - | - | 1.000 | - | - | - | - | multiple EGF-like-domains 8 [Source:ZFIN;Acc:ZDB-GENE-090730-1] |
| 10. | si:ch211-89o5.3 | si:ch211-89o5.3 | 5 | 1.923 | - | 0.923 | - | - | - | - | - | - | 1.000 | |
| 11. | CABZ01112732.1 | ENSDARG00000068453 | 4 | 1.821 | - | - | - | - | 0.821 | - | - | - | 1.000 | tripartite motif-containing protein 14-like [Source:NCBI gene;Acc:100329480] |
| 12. | CCDC18 | ENSDARG00000078822 | 5 | 1.818 | - | - | - | 0.818 | - | - | - | - | 1.000 | coiled-coil domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-030131-5414] |
| 13. | HMGXB3 | ENSDARG00000077823 | 2 | 1.818 | - | - | - | 0.818 | - | - | - | - | 1.000 | HMG box domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-111012-1] |
| 14. | IL4I1 | IL4I1 | 4 | 1.811 | - | - | - | - | 1.000 | - | - | - | 0.811 | |
| 15. | zgc:171318 | zgc:171318 | 42 | 1.781 | - | 0.781 | - | - | 1.000 | - | - | - | - | |
| 16. | GLRA2 | ENSDARG00000075012, ENSDARG00000114839 | 0 | 1 | - | - | - | - | - | - | - | - | 1.000 | glycine receptor, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-090407-1] |
| 17. | ftr43 | ENSDARG00000076106 | 2 | 1 | - | - | - | - | 1.000 | - | - | - | - | finTRIM family, member 43 [Source:ZFIN;Acc:ZDB-GENE-090507-8] |
| 18. | si:ch73-138e16.6 | ENSDARG00000101044 | 2 | 1 | - | - | - | - | 1.000 | - | - | - | - | si:ch73-138e16.6 [Source:ZFIN;Acc:ZDB-GENE-070705-205] |
| 19. | si:ch211-215l11.8 | si:ch211-215l11.8 | 0 | 1 | - | - | - | - | - | - | - | - | 1.000 | |
| 20. | zgc:158321 | zgc:158321 | 1 | 1 | - | - | - | - | 1.000 | - | - | - | - | |
| 21. | aqp10a | ENSDARG00000007086, ENSDARG00000112181 | 8 | 1 | - | - | - | - | 1.000 | - | - | - | - | aquaporin 10a [Source:ZFIN;Acc:ZDB-GENE-040718-40] |
| 22. | socs1a | ENSDARG00000038095 | 20 | 1 | - | - | - | - | 1.000 | - | - | - | - | suppressor of cytokine signaling 1a [Source:ZFIN;Acc:ZDB-GENE-040801-205] |
| 23. | slc35c1 | ENSDARG00000104669 | 65 | 1 | - | - | - | - | - | - | - | - | 1.000 | solute carrier family 35 (GDP-fucose transporter), member C1 [Source:ZFIN;Acc:ZDB-GENE-041212-11] |
| 24. | si:ch211-171l17.14 | ENSDARG00000100412, ENSDARG00000101388 | 4 | 1 | - | - | - | - | - | - | - | - | 1.000 | si:ch211-171l17.14 [Source:ZFIN;Acc:ZDB-GENE-070912-153] |
| 25. | CABZ01112877.1 | CABZ01112877.1 | 2 | 1 | - | - | - | - | 1.000 | - | - | - | - | |
| 26. | si:ch211-106h4.5 | ENSDARG00000095059 | 1 | 1 | - | - | - | - | 1.000 | - | - | - | - | si:ch211-106h4.5 [Source:ZFIN;Acc:ZDB-GENE-070705-15] |
| 27. | si:ch211-278p9.3 | ENSDARG00000094098 | 0 | 1 | - | - | - | - | - | - | - | - | 1.000 | si:ch211-278p9.3 [Source:ZFIN;Acc:ZDB-GENE-081028-38] |
| 28. | MYO1G | ENSDARG00000036104 | 1 | 1 | - | - | - | - | - | - | - | - | 1.000 | myosin IG [Source:HGNC Symbol;Acc:HGNC:13880] |
| 29. | FJX1 | ENSDARG00000035873 | 22 | 1 | - | - | - | - | - | - | - | - | 1.000 | four jointed box 1 [Source:ZFIN;Acc:ZDB-GENE-100422-10] |
| 30. | si:ch211-254p10.2 | ENSDARG00000056750 | 3 | 1 | - | - | - | - | - | - | - | - | 1.000 | si:ch211-254p10.2 [Source:ZFIN;Acc:ZDB-GENE-100922-17] |
| 31. | apba1a | ENSDARG00000103848 | 0 | 1 | - | - | - | - | - | - | - | - | 1.000 | amyloid beta (A4) precursor protein-binding, family A, member 1a [Source:ZFIN;Acc:ZDB-GENE-060526-175] |
| 32. | fam19a1 | 7 | 1 | - | - | - | - | 1.000 | - | - | - | - | family with sequence similarity 19 member A1, C-C motif chemokine like, transcript variant X5 | |
| 33. | adkb_1 | ENSDARG00000095947 | 109 | 1 | - | - | - | - | 1.000 | - | - | - | - | adenosine kinase b [Source:ZFIN;Acc:ZDB-GENE-030131-948] |
| 34. | SLCO2B1 | ENSDARG00000054609 | 0 | 1 | - | - | - | - | - | - | - | - | 1.000 | solute carrier organic anion transporter family, member 2B1 [Source:ZFIN;Acc:ZDB-GENE-051023-6] |
| 35. | grid2 | ENSDARG00000055302, ENSDARG00000110593 | 1 | 1 | - | - | - | - | - | - | - | - | 1.000 | glutamate receptor, ionotropic, delta 2 [Source:ZFIN;Acc:ZDB-GENE-040913-1] |
| 36. | zgc:172253 | ENSDARG00000074191 | 5 | 1 | - | - | - | - | 1.000 | - | - | - | - | zgc:172253 [Source:ZFIN;Acc:ZDB-GENE-080215-9] |
| 37. | CR457462.1 | CR457462.1 | 11 | 1 | - | - | - | - | - | - | - | - | 1.000 | |
| 38. | si:ch211-199o1.2 | ENSDARG00000056210 | 33 | 1 | - | - | - | - | 1.000 | - | - | - | - | si:ch211-199o1.2 [Source:ZFIN;Acc:ZDB-GENE-060503-867] |
| 39. | otogl | ENSDARG00000088750 | 2 | 1 | - | - | - | - | 1.000 | - | - | - | - | otogelin-like [Source:ZFIN;Acc:ZDB-GENE-050419-93] |
| 40. | si:rp71-7l19.6 | si:rp71-7l19.6 | 12 | 1 | - | - | - | - | - | - | - | - | 1.000 | |
| 41. | si:dkey-167k11.1 | si:dkey-167k11.1 | 14 | 1 | - | - | - | - | 1.000 | - | - | - | - | |
| 42. | ptger2a | ENSDARG00000011434 | 6 | 1 | - | - | - | - | - | - | - | - | 1.000 | prostaglandin E receptor 2a (subtype EP2) [Source:ZFIN;Acc:ZDB-GENE-040426-1321] |
| 43. | CABZ01090980.1 | CABZ01090980.1 | 6 | 1 | - | - | - | - | 1.000 | - | - | - | - | |
| 44. | ppid_1 | ENSDARG00000038835 | 4 | 1 | - | - | - | - | - | - | - | - | 1.000 | peptidylprolyl isomerase D [Source:ZFIN;Acc:ZDB-GENE-040625-34] |
| 45. | si:ch211-145h19.4 | si:ch211-145h19.4 | 1 | 1 | - | - | - | - | - | - | - | - | 1.000 | |
| 46. | si:dkey-31f5.8 | ENSDARG00000094428 | 2 | 1 | - | - | - | - | 1.000 | - | - | - | - | si:dkey-31f5.8 [Source:ZFIN;Acc:ZDB-GENE-041210-182] |
| 47. | ft2 | ENSDARG00000109567 | 5 | 1 | - | - | - | - | 1.000 | - | - | - | - | alpha(1,3)fucosyltransferase gene 2 [Source:ZFIN;Acc:ZDB-GENE-990715-18] |
| 48. | ptx4 | ENSDARG00000038072 | 2 | 1 | - | - | - | - | - | - | - | - | 1.000 | pentraxin 4, long [Source:ZFIN;Acc:ZDB-GENE-120215-70] |
| 49. | ftr03 | 8 | 1 | - | - | - | - | 1.000 | - | - | - | - | finTRIM family, member 3 | |
| 50. | CR848025.1 | ENSDARG00000100501 | 35 | 1 | - | - | - | - | 1.000 | - | - | - | - | si:dkey-202l22.4 [Source:NCBI gene;Acc:101882714] |
| 51. | mvb12bb | ENSDARG00000079478 | 9 | 1 | - | - | - | - | - | - | - | - | 1.000 | multivesicular body subunit 12Bb [Source:ZFIN;Acc:ZDB-GENE-080414-2] |
| 52. | SMC1B | ENSDARG00000014402 | 0 | 1 | - | - | - | - | 1.000 | - | - | - | - | structural maintenance of chromosomes 1B [Source:ZFIN;Acc:ZDB-GENE-091217-1] |
| 53. | si:dkey-176g4.5 | si:dkey-176g4.5 | 4 | 1 | - | - | - | - | 1.000 | - | - | - | - | |
| 54. | lifra | ENSDARG00000098857 | 11 | 1 | - | - | - | - | - | - | - | - | 1.000 | leukemia inhibitory factor receptor alpha a [Source:ZFIN;Acc:ZDB-GENE-050327-16] |
| 55. | PTGR1 | ENSDARG00000024877, ENSDARG00000115676 | 6 | 1 | - | - | - | - | 1.000 | - | - | - | - | prostaglandin reductase 1 [Source:ZFIN;Acc:ZDB-GENE-041212-80] |
| 56. | si:ch211-233m11.1 | ENSDARG00000074653 | 1 | 1 | - | - | - | - | - | - | - | - | 1.000 | si:ch211-233m11.1 [Source:ZFIN;Acc:ZDB-GENE-081028-16] |
| 57. | dcp2_1 | ENSDARG00000104242 | 74 | 1 | - | - | - | - | - | - | - | - | 1.000 | decapping mRNA 2 [Source:ZFIN;Acc:ZDB-GENE-040426-851] |
| 58. | BX511034.1_1 | ENSDARG00000071629 | 0 | 1 | - | - | - | - | - | - | - | - | 1.000 | |
| 59. | podn | ENSDARG00000019025, ENSDARG00000113615 | 1 | 1 | - | - | - | - | 1.000 | - | - | - | - | podocan [Source:ZFIN;Acc:ZDB-GENE-100922-117] |
| 60. | BX005256.5 | BX005256.5 | 25 | 1 | - | - | - | - | 1.000 | - | - | - | - | |
| 61. | si:dkey-179k24.6 | si:dkey-179k24.6 | 5 | 1 | - | - | - | - | - | - | - | - | 1.000 | |
| 62. | si:dkey-25o1.6 | si:dkey-25o1.6 | 5 | 1 | - | - | - | - | - | - | - | - | 1.000 | |
| 63. | CNBD1 | ENSDARG00000091489 | 0 | 1 | - | - | - | - | - | - | - | - | 1.000 | cyclic nucleotide binding domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-130530-1022] |
| 64. | ftr73 | ENSDARG00000095298 | 1 | 1 | - | - | - | - | 1.000 | - | - | - | - | finTRIM family, member 73 [Source:ZFIN;Acc:ZDB-GENE-090508-13] |
| 65. | si:dkey-149m13.2 | si:dkey-149m13.2 | 1 | 1 | - | - | - | - | - | - | - | - | 1.000 | |
| 66. | si:ch211-161m3.4 | ENSDARG00000103375 | 10 | 1 | - | - | - | - | 1.000 | - | - | - | - | si:ch211-161m3.4 [Source:ZFIN;Acc:ZDB-GENE-110914-169] |
| 67. | si:ch211-145m1.3 | 3 | 1 | - | - | - | - | - | - | - | - | 1.000 | si:ch211-145m1.3 | |
| 68. | si:ch73-341k19.1 | ENSDARG00000095946 | 5 | 1 | - | - | - | - | - | - | - | - | 1.000 | si:ch73-341k19.1 [Source:ZFIN;Acc:ZDB-GENE-110411-201] |
| 69. | si:ch211-249h16.8 | ENSDARG00000093630 | 1 | 1 | - | - | - | - | 1.000 | - | - | - | - | si:ch211-249h16.8 [Source:ZFIN;Acc:ZDB-GENE-090311-36] |
| 70. | osmr | ENSDARG00000100738 | 2 | 1 | - | - | - | - | 1.000 | - | - | - | - | oncostatin M receptor [Source:ZFIN;Acc:ZDB-GENE-060526-48] |
| 71. | zgc:153654 | ENSDARG00000060322 | 9 | 1 | - | - | - | - | 1.000 | - | - | - | - | zgc:153654 [Source:ZFIN;Acc:ZDB-GENE-060929-1102] |
| 72. | CR356223.1 | ENSDARG00000093865 | 1 | 1 | - | - | - | - | - | - | - | - | 1.000 | |
| 73. | BX119910.4 | BX119910.4 | 0 | 1 | - | - | - | - | - | - | - | - | 1.000 | |
| 74. | CNGA1 | 3 | 1 | - | - | - | - | 1.000 | - | - | - | - | cyclic nucleotide gated channel alpha 1 | |
| 75. | si:ch211-198e13.3 | 5 | 1 | - | - | - | - | - | - | - | - | 1.000 | si:ch211-198e13.3, transcript variant X1 | |
| 76. | or125-2 | ENSDARG00000094714 | 0 | 1 | - | - | - | - | 1.000 | - | - | - | - | odorant receptor, family E, subfamily 125, member 2 [Source:ZFIN;Acc:ZDB-GENE-070806-92] |
| 77. | CT027705.3 | CT027705.3 | 9 | 1 | - | - | - | - | 1.000 | - | - | - | - | |
| 78. | zgc:92161 | ENSDARG00000101749 | 27 | 1 | - | - | - | - | - | - | - | - | 1.000 | zgc:92161 [Source:ZFIN;Acc:ZDB-GENE-040912-22] |
| 79. | hhat | ENSDARG00000074428 | 8 | 1 | - | - | - | - | - | - | - | - | 1.000 | hedgehog acyltransferase [Source:ZFIN;Acc:ZDB-GENE-051118-1] |
| 80. | si:dkey-82i20.3 | si:dkey-82i20.3 | 6 | 1 | - | - | - | - | - | - | - | - | 1.000 | |
| 81. | si:ch211-113a14.19_1 | ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 | 15 | 1 | - | - | - | - | - | - | - | - | 1.000 | si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198] |
| 82. | si:dkeyp-51f11.3 | si:dkeyp-51f11.3 | 0 | 1 | - | - | - | - | - | - | - | - | 1.000 | |
| 83. | guca1a | ENSDARG00000010454 | 9 | 1 | - | - | - | - | 1.000 | - | - | - | - | guanylate cyclase activator 1A [Source:ZFIN;Acc:ZDB-GENE-011128-5] |
| 84. | slc47a2 | 2 | 1 | - | - | - | - | - | - | - | - | 1.000 | solute carrier family 47 (multidrug and toxin extrusion), member 2 | |
| 85. | PDE6H | 3 | 1 | - | - | - | - | - | - | - | - | 1.000 | phosphodiesterase 6H, cGMP-specific, cone, gamma, transcript variant 2 | |
| 86. | BRINP1 | ENSDARG00000078302 | 0 | 1 | - | - | - | - | 1.000 | - | - | - | - | bone morphogenetic protein/retinoic acid inducible neural-specific 1 [Source:ZFIN;Acc:ZDB-GENE-130530-847] |
| 87. | CDR2_1 | CDR2_1 | 8 | 1 | - | - | - | - | - | - | - | - | 1.000 | |
| 88. | CDK18 | ENSDARG00000012204 | 5 | 1 | - | - | - | - | - | - | - | - | 1.000 | cyclin dependent kinase 18 [Source:HGNC Symbol;Acc:HGNC:8751] |
| 89. | si:dkey-34f9.2 | si:dkey-34f9.2 | 0 | 1 | - | - | - | - | - | - | - | - | 1.000 | |
| 90. | VSIG10L | ENSDARG00000089237 | 12 | 1 | - | - | - | - | 1.000 | - | - | - | - | V-set and immunoglobulin domain containing 10 like [Source:ZFIN;Acc:ZDB-GENE-131127-231] |
| 91. | ctrb1 | ENSDARG00000090428, ENSDARG00000110297 | 1 | 1 | - | - | - | - | - | - | - | - | 1.000 | chymotrypsinogen B1 [Source:ZFIN;Acc:ZDB-GENE-030131-1171] |
| 92. | si:ch211-214p13.7 | 1 | 1 | - | - | - | - | - | - | - | - | 1.000 | si:ch211-214p13.7 | |
| 93. | si:dkey-6n3.3 | si:dkey-6n3.3 | 9 | 1 | - | - | - | - | - | - | - | - | 1.000 | |
| 94. | BX927130.1 | ENSDARG00000099328 | 7 | 1 | - | - | - | - | - | - | - | - | 1.000 | si:dkey-27n6.5 [Source:NCBI gene;Acc:557869] |
| 95. | GPT | GPT | 2 | 1 | - | - | - | - | - | - | - | - | 1.000 | |
| 96. | BX321870.1 | ENSDARG00000098519 | 9 | 1 | - | - | - | - | - | - | - | - | 1.000 | |
| 97. | MEI1 | MEI1 | 2 | 1 | - | - | - | - | - | - | - | - | 1.000 | |
| 98. | CABZ01067175.1 | ENSDARG00000100401 | 0 | 1 | - | - | - | - | 1.000 | - | - | - | - | T-cell leukemia homeobox protein 3-like [Source:NCBI gene;Acc:100008066] |
| 99. | si:ch73-27e22.3 | ENSDARG00000077263 | 10 | 1 | - | - | - | - | - | - | - | - | 1.000 | si:ch73-27e22.3 [Source:ZFIN;Acc:ZDB-GENE-070705-231] |
| 100. | si:dkey-22h13.5 | 0 | 1 | - | - | - | - | 1.000 | - | - | - | - | si:dkey-22h13.5, transcript variant X4 |
There are 650 more genes with r >= 0.7
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C.
Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA