Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ubald1b

Gene Name Gene ID Reads Annotation
ubald1b ENSDARG00000020976 1162 UBA-like domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-050522-446]










Genes with expression patterns similar to ubald1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ubald1b ENSDARG00000020976 1162 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 UBA-like domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-050522-446]
2. phyhd1 ENSDARG00000029905 1394 1.689 - 0.918 - - - - 0.771 - - phytanoyl-CoA dioxygenase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041114-159]
3. cmc1 ENSDARG00000103670 1197 1.67 - 0.859 - - - - 0.811 - - C-x(9)-C motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2626]
4. ap1s3b ENSDARG00000027966 1064 1.661 - - - - - - 0.784 0.877 - adaptor related protein complex 1 subunit sigma 3b [Source:ZFIN;Acc:ZDB-GENE-040912-62]
5. scinla ENSDARG00000102415, ENSDARG00000117110 1996 1.643 - 0.888 - - - - - 0.755 - scinderin like a [Source:ZFIN;Acc:ZDB-GENE-030131-2005]
6. pdf ENSDARG00000013950 293 1.633 - 0.780 - - - - - 0.853 - peptide deformylase, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-050913-42]
7. stx5a ENSDARG00000025033, ENSDARG00000112598 380 1.631 - 0.816 - - - - - 0.815 - syntaxin 5A [Source:ZFIN;Acc:ZDB-GENE-040718-18]
8. tefa ENSDARG00000039117, ENSDARG00000109532 3065 1.623 - 0.722 - - - - 0.901 - - thyrotrophic embryonic factor a [Source:ZFIN;Acc:ZDB-GENE-990415-264]
9. CYSTM1 CYSTM1 176 1.621 - 0.723 - - - - - 0.898 -
10. fdx1 ENSDARG00000056410, ENSDARG00000115831 3463 1.599 - 0.810 - - - - 0.789 - - ferredoxin 1 [Source:ZFIN;Acc:ZDB-GENE-071015-2]
11. psmd11b ENSDARG00000005134 4242 1.593 - 0.821 - - - 0.772 - - - proteasome 26S subunit, non-ATPase 11b [Source:ZFIN;Acc:ZDB-GENE-030131-984]
12. prkar1aa ENSDARG00000076128 6565 1.593 - 0.785 - - - - 0.808 - - protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1) a [Source:ZFIN;Acc:ZDB-GENE-050116-2]
13. BX005085.1 ENSDARG00000089947 230 1.592 - 0.746 - - - - - 0.846 -
14. cyp26a1 ENSDARG00000033999 1136 1.591 - - - - - 0.784 - 0.807 - cytochrome P450, family 26, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-990415-44]
15. ARHGEF5 2727 1.588 - 0.850 - - - - 0.738 - - Rho guanine nucleotide exchange factor (GEF) 5, transcript variant X2
16. cox11 ENSDARG00000061004, ENSDARG00000115002 423 1.587 - 0.744 - - - - - 0.843 - cytochrome c oxidase assembly homolog 11 (yeast) [Source:ZFIN;Acc:ZDB-GENE-050506-82]
17. erlin2 ENSDARG00000095968, ENSDARG00000110551 1023 1.583 - 0.863 - 0.720 - - - - - ER lipid raft associated 2 [Source:NCBI gene;Acc:100151163]
18. tctex1d1 ENSDARG00000103545 409 1.569 - - - - - 0.703 - 0.866 - Tctex1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040912-49]
19. eppk1 ENSDARG00000096359 4315 1.562 - 0.847 - - - - 0.715 - - epiplakin 1 [Source:ZFIN;Acc:ZDB-GENE-030416-1]
20. atp5s ENSDARG00000012072 294 1.55 - 0.734 - - - - - 0.816 - ATP synthase, H+ transporting, mitochondrial F0 complex subunit s [Source:ZFIN;Acc:ZDB-GENE-040426-959]
21. hsbp1b ENSDARG00000041921 6170 1.549 - - - - - 0.786 0.763 - - heat shock factor binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1721]
22. FAM3D ENSDARG00000091625 1392 1.547 - - - - - - 0.704 0.843 - family with sequence similarity 3 member D [Source:HGNC Symbol;Acc:HGNC:18665]
23. dohh ENSDARG00000003564, ENSDARG00000116423 1117 1.546 - 0.755 - - - 0.791 - - - deoxyhypusine hydroxylase/monooxygenase [Source:ZFIN;Acc:ZDB-GENE-030131-451]
24. clasrp ENSDARG00000061742, ENSDARG00000116329 1650 1.544 - - - - - 0.746 - 0.798 - CLK4-associating serine/arginine rich protein [Source:ZFIN;Acc:ZDB-GENE-060503-837]
25. hmox2a ENSDARG00000055101, ENSDARG00000114695 815 1.544 - 0.825 - - - 0.719 - - - heme oxygenase 2a [Source:ZFIN;Acc:ZDB-GENE-040914-13]
26. reep3 reep3 2536 1.544 - - - - - - 0.797 0.747 -
27. coro1ca ENSDARG00000035598 9278 1.542 - 0.745 - - - - 0.797 - - coronin, actin binding protein, 1Ca [Source:ZFIN;Acc:ZDB-GENE-030114-6]
28. man1b1 man1b1 3294 1.539 - 0.835 - - - - 0.704 - -
29. pcnx 689 1.533 - 0.820 - - - 0.713 - - - pecanex homolog (Drosophila), transcript variant X5
30. hapln1b ENSDARG00000068516 1097 1.531 - 0.815 - - - - 0.716 - - hyaluronan and proteoglycan link protein 1b [Source:ZFIN;Acc:ZDB-GENE-050920-1]
31. exoc3l4 ENSDARG00000058180 923 1.529 - 0.827 - - - 0.702 - - - exocyst complex component 3-like 4 [Source:ZFIN;Acc:ZDB-GENE-081028-71]
32. sdf2 ENSDARG00000024026 805 1.526 - 0.806 - - - - - 0.720 - stromal cell-derived factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8823]
33. RPAP3 ENSDARG00000087962 946 1.524 - - - 0.734 - - - 0.790 - RNA polymerase II associated protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-928]
34. dennd2da ENSDARG00000058666 1780 1.523 - 0.782 - - - - 0.741 - - DENN/MADD domain containing 2Da [Source:ZFIN;Acc:ZDB-GENE-061013-542]
35. ip6k2 ip6k2 3926 1.521 - 0.794 - - - - 0.727 - -
36. fbxo42 ENSDARG00000087545 262 1.519 - 0.772 - - - - 0.747 - - F-box protein 42 [Source:ZFIN;Acc:ZDB-GENE-030131-7399]
37. tex261 ENSDARG00000044584 513 1.514 - 0.800 - - - - 0.714 - - testis expressed 261 [Source:ZFIN;Acc:ZDB-GENE-050522-400]
38. zgc:113385 zgc:113385 297 1.51 - 0.786 - - - - - 0.724 -
39. cx30.3 ENSDARG00000042707, ENSDARG00000116331 2399 1.507 - 0.769 - - - - 0.738 - - connexin 30.3 [Source:ZFIN;Acc:ZDB-GENE-040406-1]
40. AGAP3 ENSDARG00000087822 4128 1.503 - 0.796 - - - - 0.707 - - ArfGAP with GTPase domain, ankyrin repeat and PH domain 3 [Source:ZFIN;Acc:ZDB-GENE-110927-1]
41. fmo5 ENSDARG00000016357, ENSDARG00000116737 2267 1.503 - 0.772 - - - - - 0.731 - flavin containing monooxygenase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6606]
42. elovl6l ENSDARG00000038639 1184 1.502 - 0.788 - - - - 0.714 - - ELOVL family member 6, elongation of long chain fatty acids like [Source:ZFIN;Acc:ZDB-GENE-031110-3]
43. egfl7 ENSDARG00000100657 776 1.502 - 0.794 - - - 0.708 - - - EGF-like-domain, multiple 7 [Source:ZFIN;Acc:ZDB-GENE-040429-2]
44. sptssa ENSDARG00000071203 2306 1.498 - 0.733 - - - - 0.765 - - serine palmitoyltransferase, small subunit A [Source:ZFIN;Acc:ZDB-GENE-050320-26]
45. lrata ENSDARG00000037278, ENSDARG00000112503 1510 1.492 - - - - - - 0.708 0.784 - lecithin retinol acyltransferase a [Source:ZFIN;Acc:ZDB-GENE-060720-1]
46. wdr37 ENSDARG00000074611 468 1.489 - 0.785 - 0.704 - - - - - WD repeat domain 37 [Source:ZFIN;Acc:ZDB-GENE-030131-8101]
47. si:dkey-172j4.3 ENSDARG00000074183 563 1.486 - 0.753 - - - - 0.733 - - si:dkey-172j4.3 [Source:ZFIN;Acc:ZDB-GENE-081104-24]
48. si:ch211-152p11.4 ENSDARG00000079705 2341 1.486 - 0.731 - - - 0.755 - - - si:ch211-152p11.4 [Source:ZFIN;Acc:ZDB-GENE-060503-764]
49. si:dkey-253d23.10 7602 1.485 - 0.779 - - - - 0.706 - - si:dkey-253d23.10, transcript variant X4
50. gbx2 ENSDARG00000002933, ENSDARG00000116377 633 1.481 - 0.754 - - - - 0.727 - - gastrulation brain homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-020509-2]
51. cacng6a ENSDARG00000036457 344 1.476 - 0.748 - - - - - 0.728 - calcium channel, voltage-dependent, gamma subunit 6a [Source:ZFIN;Acc:ZDB-GENE-060503-440]
52. paqr6 ENSDARG00000041483 795 1.47 - - - - - - 0.757 0.713 - progestin and adipoQ receptor family member VI [Source:ZFIN;Acc:ZDB-GENE-090714-1]
53. si:dkey-193c22.2 ENSDARG00000076735 2791 1.465 - - - - - 0.703 0.762 - - si:dkey-193c22.2 [Source:ZFIN;Acc:ZDB-GENE-070705-337]
54. osbpl9 ENSDARG00000069298 2730 1.459 - 0.744 - - - - 0.715 - - oxysterol binding protein-like 9 [Source:ZFIN;Acc:ZDB-GENE-061110-103]
55. ssr3_1 ENSDARG00000014165, ENSDARG00000111483 5702 1.447 - 0.713 - - - - 0.734 - - signal sequence receptor, gamma [Source:ZFIN;Acc:ZDB-GENE-030131-9134]
56. lamp2 ENSDARG00000014914 5035 1.445 - 0.731 - - - - 0.714 - - lysosomal-associated membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-030729-9]
57. gosr1 ENSDARG00000026654, ENSDARG00000113670, ENSDARG00000113785 588 1.444 - - - 0.739 - 0.705 - - - golgi SNAP receptor complex member 1 [Source:ZFIN;Acc:ZDB-GENE-050417-133]
58. ergic3 ENSDARG00000038074 1773 1.443 - - - - - 0.731 0.712 - - ERGIC and golgi 3 [Source:ZFIN;Acc:ZDB-GENE-040426-795]
59. CFP ENSDARG00000094451 852 1.443 - - - 0.721 - - 0.722 - - complement factor properdin [Source:ZFIN;Acc:ZDB-GENE-030131-9247]
60. esrp2 ENSDARG00000018814, ENSDARG00000115061 1198 1.438 - - - - - - 0.717 0.721 - epithelial splicing regulatory protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9824]
61. tbca ENSDARG00000016754 6427 1.438 - - - 0.715 - - 0.723 - - tubulin cofactor a [Source:ZFIN;Acc:ZDB-GENE-040426-962]
62. srpr 5148 1.434 - - - - - 0.703 0.731 - - signal recognition particle receptor (docking protein)
63. tnfaip8l3 ENSDARG00000088709 345 1.429 - - - 0.706 - - - 0.723 - tumor necrosis factor, alpha-induced protein 8-like 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1313]
64. col4a6 ENSDARG00000052061 8636 1.424 - 0.702 - - - - 0.722 - - collagen, type IV, alpha 6 [Source:ZFIN;Acc:ZDB-GENE-101001-2]
65. ubr2 ENSDARG00000070164 3960 1.404 - 0.701 - - - 0.703 - - - ubiquitin protein ligase E3 component n-recognin 2 [Source:ZFIN;Acc:ZDB-GENE-081107-29]
66. ppp1r3da ENSDARG00000077513 109 0.942 - - - - - - - 0.942 - protein phosphatase 1, regulatory subunit 3Da [Source:ZFIN;Acc:ZDB-GENE-080204-75]
67. pdrg1 ENSDARG00000045017 628 0.936 - - - - - - - 0.936 - p53 and DNA-damage regulated 1 [Source:ZFIN;Acc:ZDB-GENE-050417-276]
68. tpd52l1 ENSDARG00000042548 61 0.931 - - - - - - - 0.931 - tumor protein D52-like 1 [Source:ZFIN;Acc:ZDB-GENE-050522-121]
69. ZDHHC20_1 ZDHHC20_1 440 0.929 - - - - - - - 0.929 -
70. slc25a21 ENSDARG00000060564 344 0.927 - - - - - - - 0.927 - solute carrier family 25 (mitochondrial oxoadipate carrier), member 21 [Source:ZFIN;Acc:ZDB-GENE-060929-664]
71. coa3 coa3 1423 0.924 - 0.924 - - - - - - -
72. C3H16orf89 C3H16orf89 449 0.923 - - - - - - - 0.923 -
73. CABZ01063556.1 ENSDARG00000116344 319 0.919 - - - - - - - 0.919 - L antigen family member 3 [Source:NCBI gene;Acc:100536597]
74. tspan11 ENSDARG00000001781 743 0.914 - - - - - - - 0.914 - tetraspanin 11 [Source:ZFIN;Acc:ZDB-GENE-041210-93]
75. zgc:110269 ENSDARG00000012325 691 0.914 - - - - - - - 0.914 - zgc:110269 [Source:ZFIN;Acc:ZDB-GENE-050417-81]
76. LRIF1_1 LRIF1_1 228 0.913 - - - - - - - 0.913 -
77. acbd3 ENSDARG00000042623 2643 0.907 - 0.907 - - - - - - - acyl-Coenzyme A binding domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1930]
78. DHX36 ENSDARG00000101059 314 0.907 - - - - - - - 0.907 - DEAH (Asp-Glu-Ala-His) box polypeptide 36 [Source:ZFIN;Acc:ZDB-GENE-050419-20]
79. itgb4 ENSDARG00000028507 2568 0.906 - 0.906 - - - - - - - integrin, beta 4 [Source:ZFIN;Acc:ZDB-GENE-030131-7209]
80. otud3 ENSDARG00000022648 263 0.904 - - - - - - - 0.904 - OTU deubiquitinase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2509]
81. gprc5bb ENSDARG00000075141 119 0.901 - - - - - - - 0.901 - G protein-coupled receptor, class C, group 5, member Bb [Source:ZFIN;Acc:ZDB-GENE-090313-75]
82. gngt2a ENSDARG00000010680, ENSDARG00000110351 337 0.9 - - - - - - - 0.900 - guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7595]
83. dync2li1 ENSDARG00000039770, ENSDARG00000111924 133 0.899 - - - - - - - 0.899 - dynein, cytoplasmic 2, light intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1230]
84. CABZ01054405.1 CABZ01054405.1 115 0.899 - - - - - - - 0.899 -
85. RFESD_1 RFESD_1 65 0.899 - - - - - - - 0.899 -
86. tmem68 ENSDARG00000086737 209 0.899 - - - - - - - 0.899 - transmembrane protein 68 [Source:ZFIN;Acc:ZDB-GENE-040426-1267]
87. pdcd2 ENSDARG00000007892 223 0.898 - - - - - - - 0.898 - programmed cell death 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1236]
88. ETV3L ETV3L 67 0.898 - - - - - - - 0.898 -
89. rangap1a ENSDARG00000041317 1456 0.898 - 0.898 - - - - - - - RAN GTPase activating protein 1a [Source:ZFIN;Acc:ZDB-GENE-060929-492]
90. PTP4A2 PTP4A2 185 0.898 - - - - - - - 0.898 -
91. pth2r ENSDARG00000006678, ENSDARG00000112414 46 0.898 - - - - - - - 0.898 - parathyroid hormone 2 receptor [Source:ZFIN;Acc:ZDB-GENE-991123-10]
92. anapc15 ENSDARG00000101285 391 0.897 - - - - - - - 0.897 - anaphase promoting complex subunit 15 [Source:ZFIN;Acc:ZDB-GENE-060825-43]
93. LRRC4C ENSDARG00000113411 36 0.897 - - - - - - - 0.897 - leucine rich repeat containing 4C [Source:ZFIN;Acc:ZDB-GENE-050522-533]
94. tmem196b ENSDARG00000090140 20 0.897 - - - - - - - 0.897 - transmembrane protein 196b [Source:ZFIN;Acc:ZDB-GENE-110914-248]
95. fkbp7 ENSDARG00000010962 2986 0.896 - 0.896 - - - - - - - FK506 binding protein 7 [Source:ZFIN;Acc:ZDB-GENE-030616-182]
96. nrgna ENSDARG00000039626 50 0.895 - - - - - - - 0.895 - neurogranin (protein kinase C substrate, RC3) a [Source:ZFIN;Acc:ZDB-GENE-090710-4]
97. slc6a2 ENSDARG00000016141 49 0.895 - - - - - - - 0.895 - solute carrier family 6 (neurotransmitter transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-110408-4]
98. polr3c ENSDARG00000057562 123 0.895 - - - - - - - 0.895 - polymerase (RNA) III (DNA directed) polypeptide C [Source:ZFIN;Acc:ZDB-GENE-040426-992]
99. si:dkey-121j17.6 ENSDARG00000069661 456 0.894 - - - - - - - 0.894 - si:dkey-121j17.6 [Source:ZFIN;Acc:ZDB-GENE-121214-361]
100. enoph1 ENSDARG00000026198, ENSDARG00000111634, ENSDARG00000114318 1305 0.894 - 0.894 - - - - - - - enolase-phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-040704-73]

There are 1209 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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