Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for uba3

Gene Name Gene ID Reads Annotation
uba3 ENSDARG00000057987, ENSDARG00000116639 1181 ubiquitin-like modifier activating enzyme 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2825]










Genes with expression patterns similar to uba3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. uba3 ENSDARG00000057987, ENSDARG00000116639 1181 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ubiquitin-like modifier activating enzyme 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2825]
2. C3H16orf58 C3H16orf58 487 1.801 - - 0.899 - - 0.902 - - -
3. SCARF2 1117 1.765 - - 0.863 - - 0.902 - - - scavenger receptor class F, member 2
4. arhgap29b ENSDARG00000017748 812 1.752 - - 0.895 - - 0.857 - - - Rho GTPase activating protein 29b [Source:ZFIN;Acc:ZDB-GENE-031010-44]
5. nup88 ENSDARG00000003235, ENSDARG00000111135 1114 1.751 - - 0.858 - - 0.893 - - - nucleoporin 88 [Source:ZFIN;Acc:ZDB-GENE-050522-297]
6. mmp14a ENSDARG00000002235 911 1.743 - 0.796 0.947 - - - - - - matrix metallopeptidase 14a (membrane-inserted) [Source:ZFIN;Acc:ZDB-GENE-030901-1]
7. si:ch73-173m3.3 si:ch73-173m3.3 425 1.72 - - 0.894 - - 0.826 - - -
8. CABZ01003826.1_1 CABZ01003826.1_1 1154 1.715 - - 0.903 - - 0.812 - - -
9. jag1b ENSDARG00000013168 1002 1.709 - 0.778 0.931 - - - - - - jagged 1b [Source:ZFIN;Acc:ZDB-GENE-011128-4]
10. st6gal2l st6gal2l 292 1.698 - 0.768 - - - 0.930 - - -
11. TRIP10 TRIP10 1079 1.696 - - 0.879 - - 0.817 - - -
12. tacc3 ENSDARG00000005454 2305 1.695 - - 0.810 - - 0.885 - - - transforming, acidic coiled-coil containing protein 3 [Source:ZFIN;Acc:ZDB-GENE-050522-327]
13. trpm7 ENSDARG00000036232 925 1.679 - - 0.896 - - 0.783 - - - transient receptor potential cation channel, subfamily M, member 7 [Source:ZFIN;Acc:ZDB-GENE-021115-2]
14. mdm4 ENSDARG00000057513 1954 1.667 - - 0.857 - - 0.810 - - - MDM4, p53 regulator [Source:ZFIN;Acc:ZDB-GENE-030131-6872]
15. TBC1D13 815 1.664 0.771 - 0.893 - - - - - - TBC1 domain family, member 13
16. tm7sf3 ENSDARG00000093658 754 1.655 - - - - - 0.878 0.777 - - transmembrane 7 superfamily member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1770]
17. slc25a42 ENSDARG00000099368 2420 1.652 - - 0.785 - - 0.867 - - - solute carrier family 25, member 42 [Source:ZFIN;Acc:ZDB-GENE-060825-313]
18. PPP1R8 PPP1R8 1897 1.647 - - 0.847 - - - 0.800 - -
19. psmg2 ENSDARG00000035987 1938 1.645 - - - - - 0.905 0.740 - - proteasome (prosome, macropain) assembly chaperone 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1972]
20. KCNAB3 KCNAB3 134 1.642 - - - - 0.735 0.907 - - -
21. nipal3 ENSDARG00000021147, ENSDARG00000109606 1058 1.634 - 0.713 - - - 0.921 - - - NIPA like domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040718-379]
22. tmem39b ENSDARG00000018956 590 1.634 - 0.736 - - - 0.898 - - - transmembrane protein 39B [Source:ZFIN;Acc:ZDB-GENE-030131-6042]
23. F8A3 F8A3 646 1.634 - - 0.904 - - - 0.730 - -
24. nus1 ENSDARG00000027813 1417 1.628 - 0.714 - - - 0.914 - - - NUS1, dehydrodolichyl diphosphate synthase subunit [Source:ZFIN;Acc:ZDB-GENE-040718-48]
25. sra1 ENSDARG00000053619 2799 1.628 - - 0.753 - - 0.875 - - - steroid receptor RNA activator 1 [Source:ZFIN;Acc:ZDB-GENE-040625-6]
26. matr3l1.1_1 ENSDARG00000000394, ENSDARG00000001162 1860 1.627 - - - - - 0.907 0.720 - - matrin 3-like 1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-40]
27. bub1bb ENSDARG00000074927 1667 1.626 - - 0.765 - - - 0.861 - - BUB1 mitotic checkpoint serine/threonine kinase Bb [Source:ZFIN;Acc:ZDB-GENE-030829-51]
28. nufip2 ENSDARG00000069066 3965 1.626 - - 0.821 - - 0.805 - - - nuclear fragile X mental retardation protein interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-041111-7]
29. mgst1 mgst1 2820 1.621 - 0.736 - - - 0.885 - - -
30. prkar1aa ENSDARG00000076128 6565 1.618 - - 0.871 - - 0.747 - - - protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1) a [Source:ZFIN;Acc:ZDB-GENE-050116-2]
31. tmed3 ENSDARG00000028816, ENSDARG00000113132 1686 1.617 - - 0.787 - - 0.830 - - - transmembrane p24 trafficking protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8335]
32. ctnnd1 ENSDARG00000078233 2520 1.615 - 0.752 0.863 - - - - - - catenin (cadherin-associated protein), delta 1 [Source:ZFIN;Acc:ZDB-GENE-110208-9]
33. rif1 ENSDARG00000062650, ENSDARG00000110568 1751 1.608 - - - - - 0.847 - - 0.761 replication timing regulatory factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3406]
34. etv4 ENSDARG00000018303, ENSDARG00000115855 3889 1.588 - 0.705 0.883 - - - - - - ets variant 4 [Source:ZFIN;Acc:ZDB-GENE-990415-71]
35. scinlb ENSDARG00000058348 1466 1.584 - 0.758 - - - 0.826 - - - scinderin like b [Source:ZFIN;Acc:ZDB-GENE-040426-2068]
36. dpp3 ENSDARG00000020676 2393 1.573 - - 0.835 - - 0.738 - - - dipeptidyl-peptidase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1247]
37. nkap ENSDARG00000033450, ENSDARG00000116152 1929 1.557 - - 0.839 - - 0.718 - - - NFKB activating protein [Source:ZFIN;Acc:ZDB-GENE-030131-8064]
38. si:ch211-198a12.6 ENSDARG00000074624, ENSDARG00000114808 8911 1.555 - - - - - 0.803 0.752 - - si:ch211-198a12.6 [Source:ZFIN;Acc:ZDB-GENE-030131-1683]
39. rab35 rab35 1287 1.549 - - - - - 0.844 0.705 - -
40. cdc34b ENSDARG00000012627 3879 1.548 - 0.740 - - - 0.808 - - - cell division cycle 34 homolog (S. cerevisiae) b [Source:ZFIN;Acc:ZDB-GENE-040718-439]
41. tbl1xr1a ENSDARG00000058696 5439 1.539 - 0.735 - - - - 0.804 - - transducin (beta)-like 1 X-linked receptor 1a [Source:ZFIN;Acc:ZDB-GENE-050522-314]
42. cenpe ENSDARG00000063385 4428 1.536 - - - - - 0.795 0.741 - - centromere protein E [Source:ZFIN;Acc:ZDB-GENE-060929-860]
43. mrpl3 ENSDARG00000103318 2308 1.525 - - 0.764 - - 0.761 - - - mitochondrial ribosomal protein L3 [Source:ZFIN;Acc:ZDB-GENE-030131-8227]
44. styk1 1199 1.524 - 0.735 0.789 - - - - - - serine/threonine/tyrosine kinase 1
45. isl2a ENSDARG00000003971 971 1.518 - 0.815 - - - - 0.703 - - ISL LIM homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-562]
46. gsna ENSDARG00000011459, ENSDARG00000115062, ENSDARG00000116084 1623 1.502 - 0.727 - - - 0.775 - - - gelsolin a [Source:ZFIN;Acc:ZDB-GENE-030131-9653]
47. clptm1 ENSDARG00000018973, ENSDARG00000109534, ENSDARG00000114443 2439 1.493 - - 0.740 - - 0.753 - - - cleft lip and palate associated transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-040801-265]
48. gabarapa ENSDARG00000035557, ENSDARG00000110690 6723 1.491 - 0.725 - - - 0.766 - - - GABA(A) receptor-associated protein a [Source:ZFIN;Acc:ZDB-GENE-030131-5174]
49. rnf165b ENSDARG00000078817 432 1.464 - - - - - 0.725 0.739 - - ring finger protein 165b [Source:ZFIN;Acc:ZDB-GENE-081104-369]
50. taf8 ENSDARG00000026806, ENSDARG00000114197 1427 1.464 - - - - - 0.744 0.720 - - TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-040426-1013]
51. copa ENSDARG00000004173 3977 1.462 - 0.703 0.759 - - - - - - coatomer protein complex, subunit alpha [Source:ZFIN;Acc:ZDB-GENE-020905-2]
52. ptbp1b ENSDARG00000031907, ENSDARG00000115714 3808 1.461 - - 0.734 - - 0.727 - - - polypyrimidine tract binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9796]
53. ppt1 ENSDARG00000039980 1599 1.451 - 0.727 - - - 0.724 - - - palmitoyl-protein thioesterase 1 (ceroid-lipofuscinosis, neuronal 1, infantile) [Source:ZFIN;Acc:ZDB-GENE-040426-2653]
54. uspl1 ENSDARG00000034825, ENSDARG00000109866 457 0.963 - - - - - 0.963 - - - ubiquitin specific peptidase like 1 [Source:ZFIN;Acc:ZDB-GENE-040930-7]
55. CABZ01067945.1 CABZ01067945.1 469 0.957 - - - - - 0.957 - - -
56. zc3hc1 ENSDARG00000062651 1552 0.951 - - - - - 0.951 - - - zinc finger, C3HC-type containing 1 [Source:ZFIN;Acc:ZDB-GENE-061013-94]
57. suz12b ENSDARG00000098924, ENSDARG00000114239, ENSDARG00000114524 1947 0.948 - - - - - 0.948 - - - SUZ12, polycomb repressive complex 2 subunit b [Source:ZFIN;Acc:ZDB-GENE-030131-3255]
58. ccz1 ENSDARG00000056559, ENSDARG00000109877 2629 0.944 - - - - - 0.944 - - - CCZ1 homolog, vacuolar protein trafficking and biogenesis associated [Source:ZFIN;Acc:ZDB-GENE-040426-698]
59. SIK1 ENSDARG00000058606 1982 0.943 - - - - - 0.943 - - - salt-inducible kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9446]
60. chchd6a ENSDARG00000003206 421 0.941 - - - - - 0.941 - - - coiled-coil-helix-coiled-coil-helix domain containing 6a [Source:ZFIN;Acc:ZDB-GENE-040930-2]
61. map3k7 ENSDARG00000020469 2845 0.939 - - 0.939 - - - - - - mitogen-activated protein kinase kinase kinase 7 [Source:ZFIN;Acc:ZDB-GENE-041001-135]
62. st5 ENSDARG00000037363, ENSDARG00000112276 1797 0.938 - - - - - 0.938 - - - suppression of tumorigenicity 5 [Source:ZFIN;Acc:ZDB-GENE-030131-2547]
63. dync1li1 ENSDARG00000098317 729 0.937 - - - - - 0.937 - - - dynein, cytoplasmic 1, light intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4108]
64. lxn ENSDARG00000043102 415 0.937 - - - - - 0.937 - - - latexin [Source:ZFIN;Acc:ZDB-GENE-041212-18]
65. lamb4 ENSDARG00000039133 1220 0.935 - - - - - 0.935 - - - laminin, beta 4 [Source:ZFIN;Acc:ZDB-GENE-021226-2]
66. prdm4 ENSDARG00000017366 454 0.934 - - - - - 0.934 - - - PR domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-041210-131]
67. eif4e2rs1 ENSDARG00000015835 589 0.933 - - - - - 0.933 - - - eukaryotic translation initiation factor 4E family member 2 related sequence 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1728]
68. tprg1 ENSDARG00000056026, ENSDARG00000115269 382 0.933 - - - - - 0.933 - - - tumor protein p63 regulated 1 [Source:ZFIN;Acc:ZDB-GENE-070410-113]
69. psmb6 ENSDARG00000002240 8015 0.932 - - - - - 0.932 - - - proteasome subunit beta 6 [Source:ZFIN;Acc:ZDB-GENE-990415-216]
70. CCNDBP1 ENSDARG00000039328 486 0.931 - - - - - 0.931 - - - cyclin D-type binding-protein 1 [Source:ZFIN;Acc:ZDB-GENE-070410-17]
71. rasgef1bb ENSDARG00000044251, ENSDARG00000117029 635 0.931 - - - - - 0.931 - - - RasGEF domain family, member 1Bb [Source:ZFIN;Acc:ZDB-GENE-040801-220]
72. GRB7 ENSDARG00000042726 100 0.93 - - - - - 0.930 - - - growth factor receptor bound protein 7 [Source:ZFIN;Acc:ZDB-GENE-091118-23]
73. srek1ip1 ENSDARG00000043728 985 0.929 - - - - - 0.929 - - - SREK1-interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-051030-24]
74. sigmar1 ENSDARG00000011418 1240 0.929 - - - - - 0.929 - - - sigma non-opioid intracellular receptor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1006]
75. slc12a9 ENSDARG00000060366 293 0.929 - - - - - 0.929 - - - solute carrier family 12, member 9 [Source:ZFIN;Acc:ZDB-GENE-050208-222]
76. macc1 ENSDARG00000040717 1669 0.927 - - - - - 0.927 - - - metastasis associated in colon cancer 1 [Source:ZFIN;Acc:ZDB-GENE-091006-3]
77. sema6d ENSDARG00000002748 133 0.927 - - - - - 0.927 - - - sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D [Source:ZFIN;Acc:ZDB-GENE-040426-1933]
78. si:ch211-264e16.1 ENSDARG00000068947 1358 0.926 - - - - - 0.926 - - - si:ch211-264e16.1 [Source:ZFIN;Acc:ZDB-GENE-060503-226]
79. nup107 ENSDARG00000016010 1043 0.926 - - 0.926 - - - - - - nucleoporin 107 [Source:ZFIN;Acc:ZDB-GENE-041210-245]
80. FYCO1 FYCO1 194 0.925 - - - - - 0.925 - - -
81. CABZ01005777.1 CABZ01005777.1 505 0.925 - - - - - 0.925 - - -
82. samd11 ENSDARG00000077852 631 0.925 - - - - - 0.925 - - - sterile alpha motif domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-060428-2]
83. cdc20 ENSDARG00000100741 3264 0.925 - - - - - 0.925 - - - cell division cycle 20 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2044]
84. acin1b ENSDARG00000026842 3806 0.925 - - 0.925 - - - - - - apoptotic chromatin condensation inducer 1b [Source:ZFIN;Acc:ZDB-GENE-030826-12]
85. hsf1 ENSDARG00000008818 491 0.925 - - 0.925 - - - - - - heat shock transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-000616-16]
86. mafk ENSDARG00000100947 1460 0.924 - - - - - 0.924 - - - v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog K [Source:ZFIN;Acc:ZDB-GENE-040624-9]
87. txnl1 ENSDARG00000011921 692 0.924 - - - - - 0.924 - - - thioredoxin-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-701]
88. rdh8b ENSDARG00000105060 183 0.924 - - - - - 0.924 - - - retinol dehydrogenase 8b [Source:ZFIN;Acc:ZDB-GENE-040426-1759]
89. tuft1b ENSDARG00000071010 909 0.923 - - - - - 0.923 - - - tuftelin 1b [Source:ZFIN;Acc:ZDB-GENE-060503-150]
90. stra13 598 0.923 - - - - - 0.923 - - - stimulated by retinoic acid 13 homolog (mouse)
91. ENSDARG00000087348 ENSDARG00000087348 2870 0.923 - - - - - 0.923 - - -
92. zgc:163030 ENSDARG00000069192 2963 0.922 - - - - - 0.922 - - - zgc:163030 [Source:ZFIN;Acc:ZDB-GENE-060810-77]
93. cldnf ENSDARG00000043133 1006 0.922 - - - - - 0.922 - - - claudin f [Source:ZFIN;Acc:ZDB-GENE-010328-6]
94. fa2h ENSDARG00000090063 1084 0.922 - - - - - 0.922 - - - fatty acid 2-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-031219-4]
95. ube2j1 ENSDARG00000033489 497 0.921 - - - - - 0.921 - - - ubiquitin-conjugating enzyme E2, J1 [Source:ZFIN;Acc:ZDB-GENE-040426-2853]
96. trub2 ENSDARG00000028379 783 0.921 - - 0.921 - - - - - - TruB pseudouridine (psi) synthase family member 2 [Source:ZFIN;Acc:ZDB-GENE-040704-41]
97. wdr73 ENSDARG00000023152, ENSDARG00000111497 217 0.921 - - 0.921 - - - - - - WD repeat domain 73 [Source:ZFIN;Acc:ZDB-GENE-050417-126]
98. adamts1 ENSDARG00000103519 539 0.92 - - - - - 0.920 - - - ADAM metallopeptidase with thrombospondin type 1 motif, 1 [Source:ZFIN;Acc:ZDB-GENE-070814-1]
99. RECQL4 ENSDARG00000077516 462 0.92 - - - - - 0.920 - - - RecQ helicase-like 4 [Source:ZFIN;Acc:ZDB-GENE-091112-2]
100. fzd2 ENSDARG00000054438 585 0.919 - - 0.919 - - - - - - frizzled class receptor 2 [Source:ZFIN;Acc:ZDB-GENE-990415-224]

There are 1217 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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