Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for uba1

Gene Name Gene ID Reads Annotation
uba1 ENSDARG00000037559 11579 ubiquitin-like modifier activating enzyme 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2009]










Genes with expression patterns similar to uba1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. uba1 ENSDARG00000037559 11579 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ubiquitin-like modifier activating enzyme 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2009]
2. pfdn5 ENSDARG00000035043, ENSDARG00000109218, ENSDARG00000110370, ENSDARG00000113603 7566 3.77 0.714 0.786 - - - 0.847 0.709 0.714 - prefoldin 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6858]
3. pl10 pl10 10795 3.357 - 0.744 - - - 0.853 0.819 - 0.941
4. ssbp4 ENSDARG00000056483 10196 3.289 - 0.794 - 0.747 - 0.822 0.926 - - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
5. whsc1l1 8544 3.264 - - 0.874 - 0.730 0.831 0.829 - - Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X2
6. TAF15 ENSDARG00000070019 5102 3.182 0.764 0.833 - - 0.751 - 0.834 - - TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-061215-102]
7. smarcd1 ENSDARG00000019004 6028 3.179 - 0.728 - - 0.779 0.825 0.847 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1835]
8. smc1al ENSDARG00000058203 8838 3.171 0.800 0.739 - - - 0.864 0.768 - - structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]
9. lypla2 ENSDARG00000053656 8971 3.167 - 0.715 - - 0.730 0.836 0.886 - - lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
10. hmgb3a ENSDARG00000056725 15668 3.163 0.744 - - - 0.733 0.848 0.838 - - high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
11. fam60al 2846 3.15 - - - 0.729 0.821 0.796 0.804 - - family with sequence similarity 60, member A, like
12. psmb7 ENSDARG00000037962 11542 3.145 0.763 0.869 - - 0.720 - 0.793 - - proteasome subunit beta 7 [Source:ZFIN;Acc:ZDB-GENE-001208-4]
13. ylpm1 ENSDARG00000043680 7676 3.088 - 0.707 - - - 0.745 0.820 0.816 - YLP motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2196]
14. chd7 ENSDARG00000075211 12085 3.068 - - 0.716 - 0.789 0.753 0.810 - - chromodomain helicase DNA binding protein 7 [Source:ZFIN;Acc:ZDB-GENE-070912-179]
15. tmpob ENSDARG00000022978 8121 3.063 0.827 0.726 - - - 0.712 0.798 - - thymopoietin b [Source:ZFIN;Acc:ZDB-GENE-050522-8]
16. sarnp ENSDARG00000059357 4768 3.051 0.807 0.765 0.773 - - - 0.706 - - SAP domain containing ribonucleoprotein [Source:ZFIN;Acc:ZDB-GENE-050522-161]
17. morf4l1 ENSDARG00000041155, ENSDARG00000111898, ENSDARG00000111981 4044 3.047 - 0.863 - - 0.730 0.721 0.733 - - mortality factor 4 like 1 [Source:ZFIN;Acc:ZDB-GENE-040718-348]
18. psmc5 ENSDARG00000015315 8458 3.044 0.741 0.808 - - - 0.765 0.730 - - proteasome 26S subunit, ATPase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6547]
19. smarca4 smarca4 9726 3.039 0.744 - - 0.732 - 0.764 0.799 - -
20. tma7 ENSDARG00000071670 13372 3.028 0.737 - - - 0.763 0.753 0.775 - - translation machinery associated 7 homolog [Source:ZFIN;Acc:ZDB-GENE-061027-176]
21. chd4a ENSDARG00000063535, ENSDARG00000111791 4059 3.012 - 0.745 - 0.771 - 0.712 0.784 - - chromodomain helicase DNA binding protein 4a [Source:ZFIN;Acc:ZDB-GENE-041111-187]
22. rbb4l ENSDARG00000015208 5542 3.011 - 0.734 - - 0.777 0.763 0.737 - - retinoblastoma binding protein 4, like [Source:ZFIN;Acc:ZDB-GENE-030131-848]
23. cd99l2 ENSDARG00000056722 5036 2.985 0.756 - - - 0.703 0.766 0.760 - - CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
24. apex1 ENSDARG00000045843 6345 2.975 0.781 - - 0.706 - 0.748 0.740 - - APEX nuclease (multifunctional DNA repair enzyme) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2761]
25. atf7ip ENSDARG00000069619 5495 2.953 0.709 - - 0.713 0.708 - 0.823 - - activating transcription factor 7 interacting protein [Source:ZFIN;Acc:ZDB-GENE-061103-178]
26. vezf1a ENSDARG00000008247 1449 2.951 - - - 0.764 0.713 0.767 0.707 - - vascular endothelial zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-040108-4]
27. arl6ip1 ENSDARG00000054578, ENSDARG00000112340 11714 2.948 0.703 - - - - 0.758 0.735 0.752 - ADP-ribosylation factor-like 6 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1087]
28. pbx4 ENSDARG00000052150 35676 2.557 - 0.778 - - - - 0.902 - 0.877 pre-B-cell leukemia transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-000201-18]
29. ier5 ENSDARG00000009881, ENSDARG00000111680 11432 2.537 - 0.837 - - - 0.888 0.812 - - immediate early response 5 [Source:ZFIN;Acc:ZDB-GENE-030616-127]
30. khsrp ENSDARG00000026489 15738 2.51 0.747 - - - - 0.872 0.891 - - KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
31. acap3a ENSDARG00000075990 9652 2.503 0.798 - - - - - 0.760 - 0.945 ArfGAP with coiled-coil, ankyrin repeat and PH domains 3a [Source:ZFIN;Acc:ZDB-GENE-030131-1711]
32. atrx ENSDARG00000042236, ENSDARG00000112921, ENSDARG00000116878 7922 2.503 - - - 0.720 - - 0.816 - 0.967 alpha thalassemia/mental retardation syndrome X-linked homolog (human) [Source:ZFIN;Acc:ZDB-GENE-030912-11]
33. CBFA2T3 ENSDARG00000079012 6799 2.5 - - - - - 0.796 0.770 - 0.934 core-binding factor, runt domain, alpha subunit 2; translocated to, 3 [Source:ZFIN;Acc:ZDB-GENE-070209-2]
34. acin1a ENSDARG00000054290 14023 2.483 - - - 0.727 - - 0.845 - 0.911 apoptotic chromatin condensation inducer 1a [Source:ZFIN;Acc:ZDB-GENE-030616-583]
35. cdca8 ENSDARG00000043137 7541 2.474 - - 0.806 - - - 0.716 - 0.952 cell division cycle associated 8 [Source:ZFIN;Acc:ZDB-GENE-041114-171]
36. api5 ENSDARG00000033597 6655 2.465 0.730 - - - - 0.792 - - 0.943 apoptosis inhibitor 5 [Source:ZFIN;Acc:ZDB-GENE-030131-395]
37. RNF38 ENSDARG00000062055 3901 2.463 - - - - - 0.714 0.812 - 0.937 ring finger protein 38 [Source:ZFIN;Acc:ZDB-GENE-030131-8693]
38. wu:fb17g07 wu:fb17g07 10567 2.447 0.823 - - - - 0.857 0.767 - -
39. ANKRD11 ENSDARG00000051886 10024 2.445 0.736 - - - - 0.871 0.838 - - ankyrin repeat domain 11 [Source:ZFIN;Acc:ZDB-GENE-030131-3932]
40. SNRPG ENSDARG00000099667 18697 2.443 - - - - - 0.740 0.814 0.889 - small nuclear ribonucleoprotein polypeptide G [Source:ZFIN;Acc:ZDB-GENE-040912-105]
41. hist2h2l ENSDARG00000068996, ENSDARG00000112150 10411 2.406 - 0.812 - - - 0.834 0.760 - - histone 2, H2, like [Source:ZFIN;Acc:ZDB-GENE-031118-36]
42. cand1 ENSDARG00000017841 8164 2.405 0.744 0.870 - - - 0.791 - - - cullin-associated and neddylation-dissociated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2872]
43. SERBP1 SERBP1 9276 2.404 - 0.785 - - - 0.731 0.888 - -
44. ppp2r2a ppp2r2a 5785 2.397 - - - - 0.749 - 0.715 - 0.933
45. srsf6b ENSDARG00000016783 9926 2.396 - - - - 0.752 0.752 0.892 - - serine/arginine-rich splicing factor 6b [Source:ZFIN;Acc:ZDB-GENE-041219-1]
46. GABARAP GABARAP 8341 2.395 - 0.816 - - - 0.732 0.847 - -
47. tardbpl ENSDARG00000004452, ENSDARG00000116205 12160 2.394 - - - 0.714 - 0.838 0.842 - - TAR DNA binding protein, like [Source:ZFIN;Acc:ZDB-GENE-031030-1]
48. tead1a ENSDARG00000028159 3574 2.386 - - 0.734 - - 0.707 - - 0.945 TEA domain family member 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2101]
49. pds5a ENSDARG00000055022, ENSDARG00000115793 3842 2.376 - - - 0.790 0.805 0.781 - - - PDS5 cohesin associated factor A [Source:ZFIN;Acc:ZDB-GENE-040426-1612]
50. tle2 5014 2.369 0.758 - - - 0.779 - 0.832 - - transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila), transcript variant X4
51. BX511086.1 BX511086.1 8308 2.363 - - - 0.731 - 0.765 0.867 - -
52. id4 ENSDARG00000045131 2916 2.36 - - - - - 0.719 0.715 - 0.926 inhibitor of DNA binding 4 [Source:ZFIN;Acc:ZDB-GENE-051113-208]
53. hnrpl 6412 2.359 - - - 0.785 - 0.725 0.849 - - heterogeneous nuclear ribonucleoprotein L, transcript variant X1
54. gipc1 ENSDARG00000104483 2913 2.357 - - - - 0.780 0.764 0.813 - - GIPC PDZ domain containing family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060726-1]
55. her9 ENSDARG00000056438, ENSDARG00000115775 3099 2.353 0.734 - - 0.805 - - - 0.814 - hairy-related 9 [Source:ZFIN;Acc:ZDB-GENE-011213-1]
56. h1fx ENSDARG00000054058 4075 2.349 0.773 0.827 - - - - - 0.749 - H1 histone family, member X [Source:ZFIN;Acc:ZDB-GENE-030131-1228]
57. prmt1 ENSDARG00000010246 11311 2.349 0.830 - - - - 0.779 0.740 - - protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
58. hoxa9b ENSDARG00000056819 3081 2.343 0.705 - - - - 0.813 0.825 - - homeobox A9b [Source:ZFIN;Acc:ZDB-GENE-000823-2]
59. FP016176.1 FP016176.1 7030 2.342 - - 0.757 - - 0.765 0.820 - -
60. PSIP1 PSIP1 5252 2.341 0.797 - 0.788 - - - 0.756 - -
61. vdac1 ENSDARG00000045132 8051 2.341 0.702 - - - - 0.902 0.737 - - voltage-dependent anion channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6514]
62. drg1 ENSDARG00000039345 7545 2.338 0.775 - - - - 0.722 0.841 - - developmentally regulated GTP binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8767]
63. hnrnpub ENSDARG00000004735 16496 2.337 0.749 - - - - 0.749 0.839 - - heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
64. u2af2b ENSDARG00000011740 6946 2.336 - - - 0.767 0.777 - 0.792 - - U2 small nuclear RNA auxiliary factor 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1881]
65. hoxd9a ENSDARG00000059274 3414 2.336 0.711 - - - - 0.776 0.849 - - homeobox D9a [Source:ZFIN;Acc:ZDB-GENE-990415-121]
66. oxsr1a ENSDARG00000034189 4314 2.329 - 0.871 - - - 0.744 0.714 - - oxidative stress responsive 1a [Source:ZFIN;Acc:ZDB-GENE-070620-25]
67. MKI67 ENSDARG00000091150 11038 2.32 0.726 - - - - 0.786 0.808 - - marker of proliferation Ki-67 [Source:ZFIN;Acc:ZDB-GENE-030131-9771]
68. dut ENSDARG00000106529 3120 2.312 0.753 - - 0.708 - - 0.851 - - deoxyuridine triphosphatase [Source:ZFIN;Acc:ZDB-GENE-041010-93]
69. snrpf ENSDARG00000105037 10241 2.312 - 0.751 - - - 0.735 0.826 - - small nuclear ribonucleoprotein polypeptide F [Source:ZFIN;Acc:ZDB-GENE-040930-9]
70. rnps1 ENSDARG00000116743 9994 2.309 - - - - 0.877 0.720 0.712 - - RNA binding protein S1, serine-rich domain [Source:NCBI gene;Acc:327020]
71. ENDOD1_5 ENDOD1_5 8723 2.309 0.810 - - - 0.770 0.729 - - -
72. ddx39ab ENSDARG00000015111 11619 2.308 0.702 - - - - 0.721 0.885 - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2902]
73. psmc3 ENSDARG00000007141 5592 2.308 0.773 - - - - 0.800 0.735 - - proteasome 26S subunit, ATPase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-666]
74. npm1b ENSDARG00000037675 5448 2.305 0.766 - - - - 0.801 0.738 - - nucleophosmin 1b [Source:ZFIN;Acc:ZDB-GENE-080723-7]
75. FP085405.1 FP085405.1 5189 2.305 - - - - 0.752 - 0.816 0.737 -
76. cltcb ENSDARG00000090716 5544 2.301 - 0.797 - - - 0.711 0.793 - - clathrin, heavy chain b (Hc) [Source:ZFIN;Acc:ZDB-GENE-050227-12]
77. rtca ENSDARG00000002215 3558 2.295 - - - - 0.727 0.757 0.811 - - RNA 3'-terminal phosphate cyclase [Source:ZFIN;Acc:ZDB-GENE-030131-9687]
78. stip1 ENSDARG00000004906 7742 2.294 0.730 - - - - 0.731 0.833 - - stress-induced phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-041121-17]
79. cdc25 cdc25 3913 2.281 - - - - 0.718 0.777 0.786 - -
80. trip12 ENSDARG00000061397, ENSDARG00000116161 7595 2.279 - 0.786 - - - 0.744 0.749 - - thyroid hormone receptor interactor 12 [Source:ZFIN;Acc:ZDB-GENE-041111-262]
81. arnt2 ENSDARG00000103697 5731 2.273 - - - - 0.750 0.814 0.709 - - aryl-hydrocarbon receptor nuclear translocator 2 [Source:ZFIN;Acc:ZDB-GENE-001207-3]
82. psma8 ENSDARG00000010965 8321 2.266 - 0.811 - - 0.703 0.752 - - - proteasome subunit alpha 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2194]
83. mbd3b ENSDARG00000042029, ENSDARG00000061810 4561 2.265 - - - - 0.756 0.758 0.751 - - methyl-CpG binding domain protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9792]
84. LIG1 ENSDARG00000060041, ENSDARG00000110159, ENSDARG00000113788 8110 2.258 0.750 - - - - 0.711 0.797 - - ligase I, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-110404-2]
85. eif4bb ENSDARG00000010194, ENSDARG00000112432 12555 2.255 0.709 0.767 - - - - 0.779 - - eukaryotic translation initiation factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-030131-8563]
86. znf292b ENSDARG00000043973 3791 2.255 - - - 0.716 - 0.715 0.824 - - zinc finger protein 292b [Source:ZFIN;Acc:ZDB-GENE-030131-9559]
87. carm1 ENSDARG00000018698 5599 2.252 - - - - 0.811 0.724 0.717 - - coactivator-associated arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040724-77]
88. brd3b ENSDARG00000100129 6387 2.234 - 0.724 - - - 0.710 0.800 - - bromodomain containing 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5316]
89. cbx5 ENSDARG00000061187 24026 2.231 - - - - - 0.704 0.807 0.720 - chromobox homolog 5 (HP1 alpha homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5553]
90. kif15 ENSDARG00000012073 1936 2.229 - - - - 0.778 0.717 0.734 - - kinesin family member 15 [Source:ZFIN;Acc:ZDB-GENE-050622-16]
91. CPEB2 ENSDARG00000052604 2646 2.227 - 0.748 - - - 0.701 0.778 - - cytoplasmic polyadenylation element binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-130530-639]
92. jag1a ENSDARG00000030289 1275 2.223 - - - - - 0.720 0.707 0.796 - jagged 1a [Source:ZFIN;Acc:ZDB-GENE-011128-2]
93. polr2a ENSDARG00000099966 5706 2.212 - 0.728 - - 0.782 - 0.702 - - polymerase (RNA) II (DNA directed) polypeptide A [Source:ZFIN;Acc:ZDB-GENE-041008-78]
94. acsl3b ENSDARG00000014674 3748 2.212 - - - - 0.732 0.748 0.732 - - acyl-CoA synthetase long chain family member 3b [Source:ZFIN;Acc:ZDB-GENE-030131-492]
95. tfdp2 ENSDARG00000042835 1985 2.209 - - - 0.721 - 0.751 0.737 - - transcription factor Dp-2 [Source:ZFIN;Acc:ZDB-GENE-030219-104]
96. pum1 ENSDARG00000099256 5017 2.206 - - - - 0.736 0.707 0.763 - - pumilio RNA-binding family member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2074]
97. rac1 rac1 7341 2.193 - 0.725 - - - 0.739 0.729 - -
98. hoxd3a ENSDARG00000059280 1919 2.189 0.704 - - - - 0.776 0.709 - - homeobox D3a [Source:ZFIN;Acc:ZDB-GENE-990415-120]
99. bcl11ab ENSDARG00000063153 3032 2.181 - - - 0.708 - 0.709 0.764 - - B cell CLL/lymphoma 11Ab [Source:ZFIN;Acc:ZDB-GENE-061009-4]
100. nrarpa ENSDARG00000091419, ENSDARG00000111485 7867 2.177 0.711 - - - - 0.708 0.758 - - NOTCH regulated ankyrin repeat protein a [Source:ZFIN;Acc:ZDB-GENE-030515-6]

There are 1695 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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