Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for u2surp

Gene Name Gene ID Reads Annotation
u2surp ENSDARG00000061490 2814 U2 snRNP-associated SURP domain containing [Source:ZFIN;Acc:ZDB-GENE-070912-400]










Genes with expression patterns similar to u2surp

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. u2surp ENSDARG00000061490 2814 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 U2 snRNP-associated SURP domain containing [Source:ZFIN;Acc:ZDB-GENE-070912-400]
2. flot2a ENSDARG00000004830 5276 2.442 - 0.935 - - - - 0.726 - 0.781 flotillin 2a [Source:ZFIN;Acc:ZDB-GENE-020430-3]
3. snrpc ENSDARG00000009871 9567 2.396 - 0.931 - 0.707 - - 0.758 - - small nuclear ribonucleoprotein polypeptide C [Source:ZFIN;Acc:ZDB-GENE-020419-26]
4. eif3g ENSDARG00000016889 10367 2.385 - - - - - 0.726 0.762 - 0.897 eukaryotic translation initiation factor 3, subunit G [Source:ZFIN;Acc:ZDB-GENE-040426-1076]
5. pds5a ENSDARG00000055022, ENSDARG00000115793 3842 2.383 - 0.965 0.715 0.703 - - - - - PDS5 cohesin associated factor A [Source:ZFIN;Acc:ZDB-GENE-040426-1612]
6. prcc ENSDARG00000063252 2065 2.362 - - - - - 0.822 0.711 - 0.829 proline rich mitotic checkpoint control factor [Source:ZFIN;Acc:ZDB-GENE-070717-1]
7. zfand3 ENSDARG00000052833 2682 2.33 - - - - - 0.743 - 0.824 0.763 zinc finger, AN1-type domain 3 [Source:ZFIN;Acc:ZDB-GENE-050706-134]
8. rnf10 ENSDARG00000079687 6768 2.273 - 0.825 - - - 0.708 0.740 - - ring finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-030131-2969]
9. sar1b ENSDARG00000103403 1699 1.824 - 0.956 - - - - - - 0.868 secretion associated, Ras related GTPase 1B [Source:ZFIN;Acc:ZDB-GENE-040426-1958]
10. gna12a ENSDARG00000025826 1769 1.814 - 0.971 - - - - - - 0.843 guanine nucleotide binding protein (G protein) alpha 12a [Source:ZFIN;Acc:ZDB-GENE-050221-1]
11. cd2ap ENSDARG00000015224 2830 1.79 - 0.962 - - - - - - 0.828 CD2-associated protein [Source:ZFIN;Acc:ZDB-GENE-030131-8078]
12. rtf1 ENSDARG00000008947 6596 1.785 - 0.945 - - - 0.840 - - - RTF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-030131-6778]
13. prr12a ENSDARG00000074229 1668 1.766 - 0.968 - - - 0.798 - - - proline rich 12a [Source:ZFIN;Acc:ZDB-GENE-041111-223]
14. chaf1a ENSDARG00000062152, ENSDARG00000114749 5342 1.764 - 0.963 - - - 0.801 - - - chromatin assembly factor 1, subunit A (p150) [Source:ZFIN;Acc:ZDB-GENE-030131-5366]
15. ankhd1 ENSDARG00000077860 5510 1.758 - 0.956 - - - 0.802 - - - ankyrin repeat and KH domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-090421-1]
16. atp6ap1b ENSDARG00000037153 3970 1.749 - 0.945 - - - - - - 0.804 ATPase H+ transporting accessory protein 1b [Source:ZFIN;Acc:ZDB-GENE-020423-2]
17. rap2c ENSDARG00000015649 4709 1.728 - 0.900 - - - - 0.828 - - RAP2C, member of RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-041024-1]
18. atf4b2 atf4b2 4734 1.726 - 0.944 - - - - 0.782 - -
19. pacsin2 ENSDARG00000078014 1582 1.725 - 0.972 - - - - 0.753 - - protein kinase C and casein kinase substrate in neurons 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2596]
20. CWC15 ENSDARG00000013382 8969 1.724 - - - - - 0.834 - - 0.890 CWC15 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040625-10]
21. MDP1 MDP1 687 1.688 0.727 0.961 - - - - - - -
22. nsd1a ENSDARG00000060016 2974 1.686 - - - - - 0.838 - - 0.848 nuclear receptor binding SET domain protein 1a [Source:ZFIN;Acc:ZDB-GENE-080519-3]
23. gnao1b ENSDARG00000036058, ENSDARG00000112730 1951 1.686 - 0.970 - - - - - 0.716 - guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, b [Source:ZFIN;Acc:ZDB-GENE-040426-1693]
24. klc2 3058 1.685 - - - - - 0.776 - - 0.909 kinesin light chain 2
25. eif4ebp2 ENSDARG00000031819 13168 1.678 - 0.968 - - - - - - 0.710 eukaryotic translation initiation factor 4E binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-031118-83]
26. rp9 ENSDARG00000098942 3172 1.676 - 0.963 - - - 0.713 - - - RP9, pre-mRNA splicing factor [Source:ZFIN;Acc:ZDB-GENE-041114-42]
27. ncor2 ENSDARG00000000966 3352 1.676 - 0.972 - - - 0.704 - - - nuclear receptor corepressor 2 [Source:ZFIN;Acc:ZDB-GENE-030616-81]
28. baz1b ENSDARG00000102832, ENSDARG00000114866 3543 1.675 - 0.973 - 0.702 - - - - - bromodomain adjacent to zinc finger domain, 1B [Source:ZFIN;Acc:ZDB-GENE-010328-16]
29. srp72 ENSDARG00000014139 5221 1.668 - 0.956 - - - 0.712 - - - signal recognition particle 72 [Source:ZFIN;Acc:ZDB-GENE-030131-5546]
30. chtopa ENSDARG00000057234 3287 1.66 - - - - - - - 0.776 0.884 chromatin target of PRMT1a [Source:ZFIN;Acc:ZDB-GENE-030131-210]
31. kif13ba ENSDARG00000079731 1726 1.657 - 0.954 - - - - 0.703 - - kinesin family member 13Ba [Source:ZFIN;Acc:ZDB-GENE-070521-1]
32. WDFY3 ENSDARG00000078890 2092 1.655 - - - - - - 0.738 - 0.917 WD repeat and FYVE domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070705-153]
33. twistnb ENSDARG00000024416 1077 1.642 0.762 - - - - - - - 0.880 TWIST neighbor [Source:ZFIN;Acc:ZDB-GENE-041007-3]
34. actr1 ENSDARG00000011611 3879 1.639 - - - - - 0.753 - - 0.886 ARP1 actin related protein 1, centractin [Source:ZFIN;Acc:ZDB-GENE-040426-2695]
35. rbm8a ENSDARG00000016516 8789 1.629 - - - - - 0.732 - - 0.897 RNA binding motif protein 8A [Source:ZFIN;Acc:ZDB-GENE-050306-51]
36. cdk8 ENSDARG00000016496, ENSDARG00000110333 3087 1.628 - - - - - - 0.732 - 0.896 cyclin-dependent kinase 8 [Source:ZFIN;Acc:ZDB-GENE-030903-2]
37. pfdn4 ENSDARG00000061228 8266 1.619 - 0.903 - - - - 0.716 - - prefoldin subunit 4 [Source:ZFIN;Acc:ZDB-GENE-100922-122]
38. chd7 ENSDARG00000075211 12085 1.601 - - - 0.774 - 0.827 - - - chromodomain helicase DNA binding protein 7 [Source:ZFIN;Acc:ZDB-GENE-070912-179]
39. cyth1a ENSDARG00000005159, ENSDARG00000076742 2796 1.588 - - - - - - 0.712 - 0.876 cytohesin 1a [Source:ZFIN;Acc:ZDB-GENE-030131-657]
40. fam65b 557 1.578 0.739 - - - - - - - 0.839 family with sequence similarity 65, member B, transcript variant X4
41. u2af2b ENSDARG00000011740 6946 1.56 - - 0.717 - - 0.843 - - - U2 small nuclear RNA auxiliary factor 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1881]
42. slc25a1b ENSDARG00000076381 6213 1.554 - 0.835 - - - - - - 0.719 slc25a1 solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-130114-1]
43. sephs1 ENSDARG00000058292 3347 1.551 - - - - - 0.805 0.746 - - selenophosphate synthetase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3670]
44. extl3 ENSDARG00000026811 4815 1.547 - - - - - - 0.707 - 0.840 exostosin-like glycosyltransferase 3 [Source:ZFIN;Acc:ZDB-GENE-041124-2]
45. C19H16orf80 C19H16orf80 1327 1.539 - - - - - 0.750 0.789 - -
46. smarca4 smarca4 9726 1.526 - - - 0.715 - 0.811 - - -
47. sf3b2 ENSDARG00000018049 4675 1.521 - 0.791 - - - - - - 0.730 splicing factor 3b, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-070928-1]
48. TNRC6A ENSDARG00000079688 14433 1.51 - - 0.746 - - - 0.764 - - trinucleotide repeat containing 6a [Source:ZFIN;Acc:ZDB-GENE-030131-2519]
49. kansl1a ENSDARG00000090895 2593 1.499 - - 0.731 - - 0.768 - - - KAT8 regulatory NSL complex subunit 1a [Source:ZFIN;Acc:ZDB-GENE-121219-5]
50. nup62l ENSDARG00000020527, ENSDARG00000111836, ENSDARG00000112620 3763 1.495 - - - - - 0.735 0.760 - - nucleoporin 62 like [Source:ZFIN;Acc:ZDB-GENE-030131-8491]
51. sh3gl3a ENSDARG00000013360 3602 1.494 - - - - - 0.741 - - 0.753 SH3-domain GRB2-like 3a [Source:ZFIN;Acc:ZDB-GENE-070112-242]
52. SERBP1 SERBP1 9276 1.492 - - - - - - 0.777 - 0.715
53. hnrnpr ENSDARG00000014569 3423 1.491 - - - - - 0.742 - - 0.749 heterogeneous nuclear ribonucleoprotein R [Source:ZFIN;Acc:ZDB-GENE-040426-2766]
54. atf7ip ENSDARG00000069619 5495 1.475 - - - - - - 0.708 - 0.767 activating transcription factor 7 interacting protein [Source:ZFIN;Acc:ZDB-GENE-061103-178]
55. kmt2bb ENSDARG00000060697 5230 1.465 - - 0.704 - - 0.761 - - - lysine (K)-specific methyltransferase 2Bb [Source:ZFIN;Acc:ZDB-GENE-080521-1]
56. nmt2 ENSDARG00000021808 510 1.461 - - - - - - 0.744 0.717 - N-myristoyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-717]
57. pcf11 ENSDARG00000044625, ENSDARG00000114082 1885 1.46 - - 0.719 - - - - 0.741 - PCF11, cleavage and polyadenylation factor subunit [Source:ZFIN;Acc:ZDB-GENE-041114-175]
58. ptena ENSDARG00000071018, ENSDARG00000114986, ENSDARG00000115966 6610 1.459 - - - - - - 0.728 - 0.731 phosphatase and tensin homolog A [Source:ZFIN;Acc:ZDB-GENE-030131-3776]
59. foxo3b ENSDARG00000042904 5046 1.457 - - - - - 0.747 0.710 - - forkhead box O3b [Source:ZFIN;Acc:ZDB-GENE-990708-6]
60. CR936437.1 CR936437.1 6465 1.453 - - - 0.712 - - 0.741 - -
61. ube2d3 ENSDARG00000038473 4096 1.448 - - - - - 0.716 - - 0.732 ubiquitin-conjugating enzyme E2D 3 [Source:ZFIN;Acc:ZDB-GENE-030131-551]
62. mapkapk2a ENSDARG00000002552, ENSDARG00000116786 4233 1.447 - - - - - 0.701 0.746 - - mitogen-activated protein kinase-activated protein kinase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5532]
63. ZNF362 ZNF362 638 1.436 - - 0.706 - - - - 0.730 -
64. vps37a ENSDARG00000017119, ENSDARG00000110505 772 1.422 - - - - - 0.707 0.715 - - vacuolar protein sorting 37A [Source:ZFIN;Acc:ZDB-GENE-030131-8312]
65. ier3ip1 ENSDARG00000039601 5529 1.421 - - - - - 0.701 0.720 - - immediate early response 3 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-050506-106]
66. strap ENSDARG00000007405 6426 1.418 - - - - - 0.707 - 0.711 - serine/threonine kinase receptor associated protein [Source:ZFIN;Acc:ZDB-GENE-040426-1110]
67. pbrm1l ENSDARG00000077038, ENSDARG00000116839 1978 1.407 - - - - - - 0.702 0.705 - polybromo 1, like [Source:ZFIN;Acc:ZDB-GENE-010501-3]
68. copg2 ENSDARG00000034823 4162 0.986 - 0.986 - - - - - - - coatomer protein complex, subunit gamma 2 [Source:ZFIN;Acc:ZDB-GENE-000208-8]
69. ptbp3 ENSDARG00000043757 6760 0.986 - 0.986 - - - - - - - polypyrimidine tract binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-091116-1]
70. gmppb ENSDARG00000017658 3484 0.985 - 0.985 - - - - - - - GDP-mannose pyrophosphorylase B [Source:ZFIN;Acc:ZDB-GENE-040801-234]
71. slc1a5 ENSDARG00000099186 7580 0.985 - 0.985 - - - - - - - solute carrier family 1 (neutral amino acid transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-070501-4]
72. sdf4 ENSDARG00000070682, ENSDARG00000109313 1623 0.983 - 0.983 - - - - - - - stromal cell derived factor 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2061]
73. slc25a17 ENSDARG00000061684, ENSDARG00000116998 820 0.983 - 0.983 - - - - - - - solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein), member 17 [Source:ZFIN;Acc:ZDB-GENE-070620-4]
74. pex14 ENSDARG00000028322 1087 0.981 - 0.981 - - - - - - - peroxisomal biogenesis factor 14 [Source:ZFIN;Acc:ZDB-GENE-060130-169]
75. GABARAPL3 GABARAPL3 1198 0.979 - 0.979 - - - - - - -
76. ap3d1 ENSDARG00000071424, ENSDARG00000114974 5373 0.979 - 0.979 - - - - - - - adaptor related protein complex 3 subunit delta 1 [Source:ZFIN;Acc:ZDB-GENE-050208-437]
77. ovol1 1037 0.978 - 0.978 - - - - - - - ovo-like zinc finger 1, transcript variant X1
78. capn2b ENSDARG00000055592 5431 0.977 - 0.977 - - - - - - - calpain 2, (m/II) large subunit b [Source:ZFIN;Acc:ZDB-GENE-050522-84]
79. mtmr3 ENSDARG00000093364, ENSDARG00000098201 1541 0.977 - 0.977 - - - - - - - myotubularin related protein 3 [Source:ZFIN;Acc:ZDB-GENE-091204-465]
80. PSIP1 PSIP1 5252 0.977 - 0.977 - - - - - - -
81. tpst1 ENSDARG00000073872 2490 0.976 - 0.976 - - - - - - - tyrosylprotein sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-000210-10]
82. chpfa ENSDARG00000078392 1427 0.975 - 0.975 - - - - - - - chondroitin polymerizing factor a [Source:ZFIN;Acc:ZDB-GENE-100504-2]
83. aamp ENSDARG00000045019 2818 0.975 - 0.975 - - - - - - - angio-associated, migratory cell protein [Source:ZFIN;Acc:ZDB-GENE-040426-2370]
84. arl8a ENSDARG00000078686 4379 0.975 - 0.975 - - - - - - - ADP-ribosylation factor-like 8A [Source:ZFIN;Acc:ZDB-GENE-030131-5025]
85. eya3 ENSDARG00000036100 1965 0.975 - 0.975 - - - - - - - EYA transcriptional coactivator and phosphatase 3 [Source:ZFIN;Acc:ZDB-GENE-060503-864]
86. cebpa ENSDARG00000036074 751 0.974 - 0.974 - - - - - - - CCAAT enhancer binding protein alpha [Source:ZFIN;Acc:ZDB-GENE-020111-2]
87. sult1st4 ENSDARG00000003181 540 0.974 - 0.974 - - - - - - - sulfotransferase family 1, cytosolic sulfotransferase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2054]
88. larp1 ENSDARG00000101722 976 0.974 - 0.974 - - - - - - - La ribonucleoprotein domain family, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5386]
89. map1lc3b ENSDARG00000101127 3958 0.974 - 0.974 - - - - - - - microtubule-associated protein 1 light chain 3 beta [Source:ZFIN;Acc:ZDB-GENE-030131-1145]
90. CHD1 ENSDARG00000103787 1645 0.974 - 0.974 - - - - - - - chromodomain helicase DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7120]
91. pank1b ENSDARG00000010098 3202 0.974 - 0.974 - - - - - - - pantothenate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-070209-259]
92. mtpn ENSDARG00000104018 4264 0.973 - 0.973 - - - - - - - myotrophin [Source:ZFIN;Acc:ZDB-GENE-040426-2166]
93. nsun5 ENSDARG00000043209 764 0.973 - 0.973 - - - - - - - NOP2/Sun domain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2476]
94. ube2e2 ENSDARG00000034670 5918 0.973 - 0.973 - - - - - - - ubiquitin-conjugating enzyme E2E 2 [Source:ZFIN;Acc:ZDB-GENE-040801-237]
95. vps53 ENSDARG00000069324, ENSDARG00000116674 1130 0.973 - 0.973 - - - - - - - vacuolar protein sorting 53 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041114-199]
96. hsd17b14 ENSDARG00000054842 1394 0.973 - 0.973 - - - - - - - hydroxysteroid (17-beta) dehydrogenase 14 [Source:ZFIN;Acc:ZDB-GENE-040801-24]
97. appl1 1019 0.972 - 0.972 - - - - - - - adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1, transcript variant X1
98. znhit1 ENSDARG00000054574 979 0.972 - 0.972 - - - - - - - zinc finger, HIT-type containing 1 [Source:ZFIN;Acc:ZDB-GENE-050417-272]
99. nob1 ENSDARG00000016080 2483 0.972 - 0.972 - - - - - - - NIN1 (RPN12) binding protein 1 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-3112]
100. fosl2 ENSDARG00000040623 2041 0.972 - 0.972 - - - - - - - fos-like antigen 2 [Source:ZFIN;Acc:ZDB-GENE-070209-164]

There are 911 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA