Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for u2af2b

Gene Name Gene ID Reads Annotation
u2af2b ENSDARG00000011740 6946 U2 small nuclear RNA auxiliary factor 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1881]










Genes with expression patterns similar to u2af2b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. u2af2b ENSDARG00000011740 6946 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 U2 small nuclear RNA auxiliary factor 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1881]
2. CHD1 ENSDARG00000103787 1645 3.159 - - 0.772 - - - 0.735 0.781 0.871 chromodomain helicase DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7120]
3. ssbp4 ENSDARG00000056483 10196 3.019 - - - 0.767 - 0.731 0.749 0.772 - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
4. zc3h13 ENSDARG00000037177, ENSDARG00000113331 2662 2.977 - - - - - 0.726 0.725 0.717 0.809 zinc finger CCCH-type containing 13 [Source:ZFIN;Acc:ZDB-GENE-040426-1619]
5. pds5a ENSDARG00000055022, ENSDARG00000115793 3842 2.969 - - 0.754 0.789 - 0.703 0.723 - - PDS5 cohesin associated factor A [Source:ZFIN;Acc:ZDB-GENE-040426-1612]
6. ywhaqb ENSDARG00000023323 28138 2.945 - - 0.721 0.784 - 0.702 - 0.738 - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide b [Source:ZFIN;Acc:ZDB-GENE-030131-7135]
7. asf1bb ENSDARG00000043713 2340 2.902 - - 0.707 0.717 - - 0.710 0.768 - anti-silencing function 1Bb histone chaperone [Source:ZFIN;Acc:ZDB-GENE-040426-2594]
8. LIG1 ENSDARG00000060041, ENSDARG00000110159, ENSDARG00000113788 8110 2.556 - - - - - 0.888 0.775 - 0.893 ligase I, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-110404-2]
9. rnps1 ENSDARG00000116743 9994 2.48 - - 0.848 - - 0.813 0.819 - - RNA binding protein S1, serine-rich domain [Source:NCBI gene;Acc:327020]
10. vdac1 ENSDARG00000045132 8051 2.469 - 0.780 - - - - 0.873 - 0.816 voltage-dependent anion channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6514]
11. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 2.466 - - 0.774 - - - 0.798 - 0.894 C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
12. kifc1 ENSDARG00000001558 6658 2.453 - - - - - 0.727 0.850 - 0.876 kinesin family member C1 [Source:ZFIN;Acc:ZDB-GENE-000208-21]
13. KDM6B KDM6B 10265 2.442 - - 0.775 - - - 0.789 - 0.878
14. arid4a ENSDARG00000043873 4176 2.422 - - - - - 0.829 0.753 - 0.840 AT rich interactive domain 4A (RBP1-like) [Source:ZFIN;Acc:ZDB-GENE-050809-105]
15. tra2a ENSDARG00000007863 4449 2.408 - - 0.780 - - - 0.706 - 0.922 transformer 2 alpha homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1391]
16. srrm1 ENSDARG00000001244 4972 2.399 - - 0.787 - - 0.811 0.801 - - serine/arginine repetitive matrix 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2789]
17. LEPROTL1 ENSDARG00000104871 3019 2.392 - - - - - - 0.779 0.726 0.887 leptin receptor overlapping transcript like 1 [Source:HGNC Symbol;Acc:HGNC:6555]
18. brd3a ENSDARG00000006527 1636 2.363 - - - - - 0.775 - 0.743 0.845 bromodomain containing 3a [Source:ZFIN;Acc:ZDB-GENE-030131-6141]
19. TNPO2 ENSDARG00000042887 2290 2.354 - 0.713 - 0.740 - - - - 0.901 transportin 2 [Source:HGNC Symbol;Acc:HGNC:19998]
20. srsf6b ENSDARG00000016783 9926 2.354 - - - - 0.717 - 0.728 - 0.909 serine/arginine-rich splicing factor 6b [Source:ZFIN;Acc:ZDB-GENE-041219-1]
21. sumo3b ENSDARG00000035993 3414 2.349 - - 0.751 0.702 - - - - 0.896 small ubiquitin-like modifier 3b [Source:ZFIN;Acc:ZDB-GENE-040718-426]
22. uba1 ENSDARG00000037559 11579 2.336 - - - 0.767 0.777 - 0.792 - - ubiquitin-like modifier activating enzyme 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2009]
23. slbp ENSDARG00000100558 3405 2.333 - 0.769 0.736 - - - - - 0.828 stem-loop binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-9686]
24. hnrnpl2 ENSDARG00000059303, ENSDARG00000114431 6633 2.329 - - - - 0.707 0.837 0.785 - - heterogeneous nuclear ribonucleoprotein L2 [Source:ZFIN;Acc:ZDB-GENE-040426-2707]
25. ghitm 1443 2.316 - 0.900 - - - - 0.708 - 0.708 growth hormone inducible transmembrane protein
26. syncripl ENSDARG00000026723 3889 2.315 - - - - - 0.721 0.712 - 0.882 synaptotagmin binding, cytoplasmic RNA interacting protein, like [Source:ZFIN;Acc:ZDB-GENE-030131-3104]
27. CABZ01087568.1 CABZ01087568.1 1487 2.315 - - - - - 0.748 0.710 - 0.857
28. ubl3b ENSDARG00000021556 1210 2.308 - - - - - 0.789 0.705 - 0.814 ubiquitin-like 3b [Source:ZFIN;Acc:ZDB-GENE-040630-4]
29. asxl1 ENSDARG00000036956, ENSDARG00000115751 2955 2.305 - - - - - 0.753 - 0.721 0.831 ASXL transcriptional regulator 1 [Source:ZFIN;Acc:ZDB-GENE-091116-9]
30. ankhd1 ENSDARG00000077860 5510 2.304 - - - - - 0.747 0.753 - 0.804 ankyrin repeat and KH domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-090421-1]
31. brd2a ENSDARG00000022280 3481 2.3 - - - 0.710 - 0.790 - - 0.800 bromodomain containing 2a [Source:ZFIN;Acc:ZDB-GENE-990415-248]
32. CABZ01111990.1 CABZ01111990.1 4374 2.292 - - - - 0.745 - - 0.700 0.847
33. ctnnb1 ENSDARG00000014571 12004 2.287 - - 0.790 0.766 - - - 0.731 - catenin (cadherin-associated protein), beta 1 [Source:ZFIN;Acc:ZDB-GENE-980526-362]
34. tardbpl ENSDARG00000004452, ENSDARG00000116205 12160 2.276 - - - 0.724 - 0.749 0.803 - - TAR DNA binding protein, like [Source:ZFIN;Acc:ZDB-GENE-031030-1]
35. hirip3 ENSDARG00000027749, ENSDARG00000115688 5875 2.274 - - 0.802 - - 0.714 0.758 - - HIRA interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5753]
36. psmd1 ENSDARG00000003189 4373 2.269 - - 0.722 - - - 0.740 - 0.807 proteasome 26S subunit, non-ATPase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-810]
37. h2afva ENSDARG00000068820 16427 2.262 - - - 0.734 - 0.727 0.801 - - H2A histone family, member Va [Source:ZFIN;Acc:ZDB-GENE-020717-1]
38. hnrpl 6412 2.261 - - 0.738 - - - 0.790 - 0.733 heterogeneous nuclear ribonucleoprotein L, transcript variant X1
39. abcf1 ENSDARG00000031795 8635 2.252 - - - - - - 0.753 0.714 0.785 ATP-binding cassette, sub-family F (GCN20), member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-31]
40. prmt5 ENSDARG00000079605, ENSDARG00000116785 4676 2.243 - - 0.731 - - 0.787 - 0.725 - protein arginine methyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-030616-585]
41. FOXO4 ENSDARG00000055792 1457 2.238 - 0.715 - - - - - 0.784 0.739 forkhead box O4 [Source:ZFIN;Acc:ZDB-GENE-150311-1]
42. snrpd1 ENSDARG00000011648 8615 2.224 - - 0.715 - - 0.736 - 0.773 - small nuclear ribonucleoprotein D1 polypeptide [Source:ZFIN;Acc:ZDB-GENE-020419-14]
43. ubr5 ENSDARG00000018192 9267 2.224 - - 0.795 - - - 0.714 0.715 - ubiquitin protein ligase E3 component n-recognin 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6559]
44. dnmt3b dnmt3b 2522 2.213 - - 0.716 - 0.722 0.775 - - -
45. ddx19 ENSDARG00000005699 4602 2.213 - - 0.706 0.700 - - 0.807 - - DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 19 (DBP5 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-020419-30]
46. tia1 ENSDARG00000052536, ENSDARG00000114478 4392 2.213 - - 0.789 - - - 0.713 0.711 - TIA1 cytotoxic granule-associated RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-1506]
47. whsc1l1 8544 2.196 - - - 0.711 - 0.749 0.736 - - Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X2
48. ccnb1 ENSDARG00000051923 3226 2.191 - 0.733 0.732 - - - - 0.726 - cyclin B1 [Source:ZFIN;Acc:ZDB-GENE-000406-10]
49. fam60al 2846 2.174 - - 0.702 - 0.731 - 0.741 - - family with sequence similarity 60, member A, like
50. pou2f1b ENSDARG00000007996 2172 2.174 - 0.750 0.722 - - - 0.702 - - POU class 2 homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2422]
51. IM:7163548 IM:7163548 6540 2.151 - - 0.715 - - - 0.732 - 0.704
52. dido1 ENSDARG00000057940 3819 1.736 - - - - - 0.865 - - 0.871 death inducer-obliterator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6117]
53. txnl4a ENSDARG00000036190 2048 1.731 - - - - - - 0.848 - 0.883 thioredoxin-like 4A [Source:ZFIN;Acc:ZDB-GENE-041010-25]
54. cdc34b ENSDARG00000012627 3879 1.718 - - - - - - 0.807 - 0.911 cell division cycle 34 homolog (S. cerevisiae) b [Source:ZFIN;Acc:ZDB-GENE-040718-439]
55. ANKRD11 ENSDARG00000051886 10024 1.699 - - - - - 0.828 0.871 - - ankyrin repeat domain 11 [Source:ZFIN;Acc:ZDB-GENE-030131-3932]
56. rimkla ENSDARG00000016830, ENSDARG00000112193 4111 1.696 - - - - - - 0.817 - 0.879 ribosomal modification protein rimK-like family member A [Source:ZFIN;Acc:ZDB-GENE-040912-20]
57. supt5h ENSDARG00000042724, ENSDARG00000111598 6419 1.69 - - - - - 0.796 - - 0.894 SPT5 homolog, DSIF elongation factor subunit [Source:ZFIN;Acc:ZDB-GENE-001207-1]
58. fscn1a ENSDARG00000059680 3999 1.678 - - - - - - 0.841 - 0.837 fascin actin-bundling protein 1a [Source:ZFIN;Acc:ZDB-GENE-031009-1]
59. ewsr1b ENSDARG00000020465, ENSDARG00000117011 10260 1.665 - - 0.776 - - - 0.889 - - EWS RNA-binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1600]
60. cltcb ENSDARG00000090716 5544 1.662 - - - - - 0.763 0.899 - - clathrin, heavy chain b (Hc) [Source:ZFIN;Acc:ZDB-GENE-050227-12]
61. ddx23 ENSDARG00000021945, ENSDARG00000116153 2265 1.652 - - - - - - 0.778 - 0.874 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Source:ZFIN;Acc:ZDB-GENE-030131-6215]
62. abi2b ENSDARG00000014875 2259 1.65 - - - - - - 0.790 - 0.860 abl-interactor 2b [Source:ZFIN;Acc:ZDB-GENE-060519-5]
63. hug 4100 1.643 - - - - - - 0.748 - 0.895 HuG, transcript variant X2
64. ipo7 ENSDARG00000035751 7095 1.641 - - - - - 0.837 0.804 - - importin 7 [Source:ZFIN;Acc:ZDB-GENE-030131-458]
65. eif3g ENSDARG00000016889 10367 1.64 - - - - - 0.808 0.832 - - eukaryotic translation initiation factor 3, subunit G [Source:ZFIN;Acc:ZDB-GENE-040426-1076]
66. aspm ENSDARG00000103754 5708 1.639 - - 0.793 - - - 0.846 - - abnormal spindle microtubule assembly [Source:ZFIN;Acc:ZDB-GENE-050208-620]
67. dut ENSDARG00000106529 3120 1.635 - - - - - - 0.742 - 0.893 deoxyuridine triphosphatase [Source:ZFIN;Acc:ZDB-GENE-041010-93]
68. grb2b ENSDARG00000038059 9050 1.632 - - - - - 0.881 0.751 - - growth factor receptor-bound protein 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1975]
69. CABZ01028296.1 CABZ01028296.1 6203 1.631 - - - - - - 0.776 - 0.855
70. tsc22d1 ENSDARG00000038306 2413 1.629 - - - - - 0.791 - - 0.838 TSC22 domain family, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7785]
71. smarca4 smarca4 9726 1.629 - - - - - 0.823 0.806 - -
72. ppm1da ENSDARG00000009273 7713 1.62 - - - - - 0.773 - - 0.847 protein phosphatase, Mg2+/Mn2+ dependent, 1Da [Source:ZFIN;Acc:ZDB-GENE-040426-815]
73. FNBP4 ENSDARG00000051800 2839 1.619 - - 0.762 - - 0.857 - - - formin binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-130530-633]
74. MATR3 MATR3 3962 1.617 - - - - - - 0.776 - 0.841
75. foxo3b ENSDARG00000042904 5046 1.617 - - - - - 0.782 0.835 - - forkhead box O3b [Source:ZFIN;Acc:ZDB-GENE-990708-6]
76. homez homez 1875 1.616 - 0.773 - - - 0.843 - - -
77. PSIP1 PSIP1 5252 1.613 - - - - - - 0.787 - 0.826
78. nup62l ENSDARG00000020527, ENSDARG00000111836, ENSDARG00000112620 3763 1.61 - - 0.781 - - - - - 0.829 nucleoporin 62 like [Source:ZFIN;Acc:ZDB-GENE-030131-8491]
79. supt16h ENSDARG00000079949 4755 1.61 - - - - - - 0.766 - 0.844 SPT16 homolog, facilitates chromatin remodeling subunit [Source:ZFIN;Acc:ZDB-GENE-031118-96]
80. ints8 ENSDARG00000057986 1063 1.61 - 0.779 - - - - - - 0.831 integrator complex subunit 8 [Source:ZFIN;Acc:ZDB-GENE-050522-556]
81. ylpm1 ENSDARG00000043680 7676 1.609 - - 0.817 - - - 0.792 - - YLP motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2196]
82. znf865 ENSDARG00000036698 15532 1.608 - - - - - 0.769 0.839 - - zinc finger protein 865 [Source:ZFIN;Acc:ZDB-GENE-060503-896]
83. ube2d1a ENSDARG00000029107, ENSDARG00000111656 3658 1.607 - 0.740 - - - - - - 0.867 ubiquitin-conjugating enzyme E2D 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1609]
84. plagx ENSDARG00000036855 3768 1.607 - - - - - - 0.763 - 0.844 pleiomorphic adenoma gene X [Source:ZFIN;Acc:ZDB-GENE-030131-839]
85. eps15l1a ENSDARG00000042670 1565 1.605 - - - - - - 0.747 - 0.858 epidermal growth factor receptor pathway substrate 15-like 1a [Source:ZFIN;Acc:ZDB-GENE-060503-274]
86. ftsjd2 ftsjd2 2694 1.602 - - - - - - 0.779 - 0.823
87. eif2b2 ENSDARG00000041397, ENSDARG00000114220 2348 1.601 - - - - - - 0.774 - 0.827 eukaryotic translation initiation factor 2B, subunit 2 beta [Source:ZFIN;Acc:ZDB-GENE-040426-2605]
88. dock7 ENSDARG00000078675 1995 1.601 - - - - - - 0.733 - 0.868 dedicator of cytokinesis 7 [Source:ZFIN;Acc:ZDB-GENE-050302-15]
89. dcaf13 ENSDARG00000002267 2435 1.601 - 0.796 - - - - - - 0.805 ddb1 and cul4 associated factor 13 [Source:ZFIN;Acc:ZDB-GENE-040426-703]
90. actr1 ENSDARG00000011611 3879 1.601 - - - - - 0.804 0.797 - - ARP1 actin related protein 1, centractin [Source:ZFIN;Acc:ZDB-GENE-040426-2695]
91. trip12 ENSDARG00000061397, ENSDARG00000116161 7595 1.596 - - - - - 0.811 0.785 - - thyroid hormone receptor interactor 12 [Source:ZFIN;Acc:ZDB-GENE-041111-262]
92. ehmt1b ENSDARG00000026634, ENSDARG00000116921 1261 1.595 - - - - - - 0.744 - 0.851 euchromatic histone-lysine N-methyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-080515-3]
93. znf207a ENSDARG00000015538 2630 1.595 - - - - - - 0.735 - 0.860 zinc finger protein 207, a [Source:ZFIN;Acc:ZDB-GENE-040426-2273]
94. zgc:65772 zgc:65772 2092 1.591 - - - - - 0.808 0.783 - -
95. bnip3la ENSDARG00000025468 3097 1.588 - - - - - 0.826 - - 0.762 BCL2 interacting protein 3 like a [Source:ZFIN;Acc:ZDB-GENE-030131-2283]
96. hnrnpd ENSDARG00000059246, ENSDARG00000109297, ENSDARG00000113453 3440 1.583 - - - - - - 0.722 - 0.861 heterogeneous nuclear ribonucleoprotein D [Source:ZFIN;Acc:ZDB-GENE-070424-97]
97. supt6h ENSDARG00000006524 3221 1.583 - - - - - - 0.747 - 0.836 SPT6 homolog, histone chaperone [Source:ZFIN;Acc:ZDB-GENE-030131-7949]
98. tmpob ENSDARG00000022978 8121 1.582 - - 0.787 - - - 0.795 - - thymopoietin b [Source:ZFIN;Acc:ZDB-GENE-050522-8]
99. epb41l4a ENSDARG00000040087 1013 1.582 - 0.802 - - - 0.780 - - - erythrocyte membrane protein band 4.1 like 4A [Source:ZFIN;Acc:ZDB-GENE-990415-20]
100. arhgef4 ENSDARG00000012914 1464 1.582 - - - - - 0.754 - - 0.828 Rho guanine nucleotide exchange factor (GEF) 4 [Source:ZFIN;Acc:ZDB-GENE-070912-575]

There are 1830 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA