Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for tyms

Gene Name Gene ID Reads Annotation
tyms ENSDARG00000042894 3068 thymidylate synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-59]










Genes with expression patterns similar to tyms

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tyms ENSDARG00000042894 3068 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 thymidylate synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-59]
2. inppl1a ENSDARG00000104222 6256 2.435 - - - - - - 0.871 0.708 0.856 inositol polyphosphate phosphatase-like 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3904]
3. klc2 3058 1.947 - - - - 0.989 - 0.958 - - kinesin light chain 2
4. kansl3 ENSDARG00000029556 2487 1.945 - - - - 0.982 - 0.963 - - KAT8 regulatory NSL complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-050809-132]
5. zgc:162816 ENSDARG00000070416 974 1.944 - - - - 0.988 - 0.956 - - zgc:162816 [Source:ZFIN;Acc:ZDB-GENE-070410-94]
6. itpkcb ENSDARG00000067741 2370 1.942 - 0.999 - - - - 0.943 - - inositol-trisphosphate 3-kinase Cb [Source:ZFIN;Acc:ZDB-GENE-080225-27]
7. cdc14b ENSDARG00000021483 4958 1.934 - - - - 0.988 - 0.946 - - cell division cycle 14B [Source:ZFIN;Acc:ZDB-GENE-040426-820]
8. snrnp70 ENSDARG00000077126 5921 1.929 - - - - 0.990 - 0.939 - - small nuclear ribonucleoprotein 70 (U1) [Source:ZFIN;Acc:ZDB-GENE-040825-2]
9. ankrd13c ENSDARG00000103831 3593 1.927 - - - - 0.975 - 0.952 - - ankyrin repeat domain 13C [Source:ZFIN;Acc:ZDB-GENE-030131-3892]
10. abl1 ENSDARG00000035187 3553 1.924 - - - - 0.983 - 0.941 - - c-abl oncogene 1, non-receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-100812-9]
11. zdhhc5a ENSDARG00000016263 625 1.909 - - - - 0.956 - 0.953 - - zinc finger, DHHC-type containing 5a [Source:ZFIN;Acc:ZDB-GENE-090312-92]
12. ap1b1 ENSDARG00000020621 3874 1.874 - - - - 0.966 - 0.908 - - adaptor related protein complex 1 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-061025-1]
13. si:ch211-22i13.2 ENSDARG00000043485 4719 1.874 - - - - 0.973 - 0.901 - - si:ch211-22i13.2 [Source:ZFIN;Acc:ZDB-GENE-041014-143]
14. tmed4 ENSDARG00000024954 3476 1.846 - - - - - - 0.936 - 0.910 transmembrane p24 trafficking protein 4 [Source:ZFIN;Acc:ZDB-GENE-040625-140]
15. ube2e1 ENSDARG00000116649 10656 1.833 - - - - 0.857 - 0.976 - - ubiquitin-conjugating enzyme E2E 1 [Source:ZFIN;Acc:ZDB-GENE-071004-16]
16. rab11ba ENSDARG00000041878 4651 1.806 - - - - 0.953 - 0.853 - - RAB11B, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-040426-2860]
17. dnajc9 ENSDARG00000031293, ENSDARG00000111989 4082 1.761 - - - - 0.810 - 0.951 - - DnaJ (Hsp40) homolog, subfamily C, member 9 [Source:ZFIN;Acc:ZDB-GENE-040718-130]
18. rad51 ENSDARG00000041411, ENSDARG00000111948 1056 1.751 - - - 0.785 - - 0.966 - - RAD51 recombinase [Source:ZFIN;Acc:ZDB-GENE-040426-2286]
19. creb3l1 ENSDARG00000015793 1988 1.739 - - - - - - 0.937 - 0.802 cAMP responsive element binding protein 3-like 1 [Source:ZFIN;Acc:ZDB-GENE-030219-181]
20. tbccd1 ENSDARG00000056886, ENSDARG00000114427 1389 1.734 - - - - - 0.776 0.958 - - TBCC domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041210-222]
21. nup107 ENSDARG00000016010 1043 1.733 - - - 0.759 - - 0.974 - - nucleoporin 107 [Source:ZFIN;Acc:ZDB-GENE-041210-245]
22. gbp ENSDARG00000040059 1939 1.73 - - - - 0.986 0.744 - - - glycogen synthase kinase binding protein [Source:ZFIN;Acc:ZDB-GENE-990714-7]
23. phf21ab ENSDARG00000021378 1706 1.713 - - - 0.756 - - 0.957 - - PHD finger protein 21Ab [Source:ZFIN;Acc:ZDB-GENE-030131-6456]
24. tmem189 ENSDARG00000042732 4004 1.71 - 0.994 - - - - 0.716 - - transmembrane protein 189 [Source:ZFIN;Acc:ZDB-GENE-041010-150]
25. uhrf1 ENSDARG00000103409 3282 1.692 - - - 0.736 - - 0.956 - - ubiquitin-like with PHD and ring finger domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2039]
26. lsm7 ENSDARG00000058328 7191 1.691 - - - - 0.833 - 0.858 - - LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-030131-8284]
27. cux2a 493 1.69 0.718 - - - - - 0.972 - - cut-like homeobox 2a
28. ppp2r2d ENSDARG00000102009 5710 1.689 - - - 0.713 0.976 - - - - protein phosphatase 2, regulatory subunit B, delta [Source:ZFIN;Acc:ZDB-GENE-040426-2086]
29. smc5 ENSDARG00000044282 779 1.687 - - - 0.730 - - 0.957 - - structural maintenance of chromosomes 5 [Source:ZFIN;Acc:ZDB-GENE-061013-288]
30. lyrm2 ENSDARG00000033138 5597 1.683 - 0.840 - - - - 0.843 - - LYR motif containing 2 [Source:ZFIN;Acc:ZDB-GENE-040914-27]
31. ppm1g ENSDARG00000075559 6516 1.641 - - - 0.743 - - 0.898 - - protein phosphatase, Mg2+/Mn2+ dependent, 1G [Source:ZFIN;Acc:ZDB-GENE-030425-4]
32. krcp ENSDARG00000040224 5961 1.64 - - - 0.725 - - 0.915 - - kelch repeat-containing protein [Source:ZFIN;Acc:ZDB-GENE-030131-2126]
33. ppiab ENSDARG00000103994 47491 1.628 - - - - 0.723 - 0.905 - - peptidylprolyl isomerase Ab (cyclophilin A) [Source:ZFIN;Acc:ZDB-GENE-030131-7459]
34. kif5ba ENSDARG00000074131, ENSDARG00000103394 5232 1.624 - - - - - - 0.918 0.706 - kinesin family member 5B, a [Source:ZFIN;Acc:ZDB-GENE-070629-2]
35. MAL 9331 1.618 - 0.868 - - - - - - 0.750 mal, T-cell differentiation protein
36. psma1 ENSDARG00000101560 5390 1.611 0.702 0.909 - - - - - - - proteasome subunit alpha 1 [Source:ZFIN;Acc:ZDB-GENE-040801-15]
37. hspb1 ENSDARG00000041065 13534 1.608 - 0.881 - - 0.727 - - - - heat shock protein, alpha-crystallin-related, 1 [Source:ZFIN;Acc:ZDB-GENE-030326-4]
38. cnih cnih 8292 1.599 - - 0.764 - - - 0.835 - -
39. rrm2_1 ENSDARG00000020711, ENSDARG00000078069 11634 1.598 - - - - 0.783 - 0.815 - - ribonucleotide reductase M2 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-25]
40. slc25a20 ENSDARG00000040401 9258 1.588 - 0.702 - - 0.886 - - - - solute carrier family 25 (carnitine/acylcarnitine translocase), member 20 [Source:ZFIN;Acc:ZDB-GENE-040426-1869]
41. ptgr1 ENSDARG00000024877, ENSDARG00000115676 4312 1.516 - - - 0.711 - 0.805 - - - prostaglandin reductase 1 [Source:ZFIN;Acc:ZDB-GENE-041212-80]
42. h2afva ENSDARG00000068820 16427 1.502 - 0.755 - 0.747 - - - - - H2A histone family, member Va [Source:ZFIN;Acc:ZDB-GENE-020717-1]
43. tuba8l3 ENSDARG00000070155 7525 1.497 0.727 - - - - - 0.770 - - tubulin, alpha 8 like 3 [Source:ZFIN;Acc:ZDB-GENE-040801-77]
44. mcmbp ENSDARG00000055314 731 1.472 - - - 0.748 - - - 0.724 - minichromosome maintenance complex binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-9676]
45. igdcc3 ENSDARG00000075158 1921 1.457 - - - 0.739 - - - 0.718 - immunoglobulin superfamily, DCC subclass, member 3 [Source:ZFIN;Acc:ZDB-GENE-080303-24]
46. usf2 ENSDARG00000020228 2667 1.449 - - - 0.703 - - - 0.746 - upstream transcription factor 2, c-fos interacting [Source:ZFIN;Acc:ZDB-GENE-030131-8475]
47. kpna4 ENSDARG00000023190 2505 1.448 0.728 - - - - 0.720 - - - karyopherin alpha 4 (importin alpha 3) [Source:ZFIN;Acc:ZDB-GENE-030131-5584]
48. cldn5a ENSDARG00000043716 3865 1.445 0.737 - - 0.708 - - - - - claudin 5a [Source:ZFIN;Acc:ZDB-GENE-040426-2442]
49. sox19b ENSDARG00000040266 532 1.425 0.706 - - 0.719 - - - - - SRY (sex determining region Y)-box 19b [Source:ZFIN;Acc:ZDB-GENE-010111-1]
50. mrpl11 ENSDARG00000013075 2927 1 - 1.000 - - - - - - - mitochondrial ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040718-294]
51. larp7 ENSDARG00000017315 1194 0.999 - 0.999 - - - - - - - La ribonucleoprotein domain family, member 7 [Source:ZFIN;Acc:ZDB-GENE-030131-6896]
52. hoxc13a ENSDARG00000070353 4815 0.999 - 0.999 - - - - - - - homeobox C13a [Source:ZFIN;Acc:ZDB-GENE-000822-4]
53. ADAMTS17 ENSDARG00000075555 887 0.999 - 0.999 - - - - - - - ADAM metallopeptidase with thrombospondin type 1 motif, 17 [Source:ZFIN;Acc:ZDB-GENE-121030-7]
54. rtn3 ENSDARG00000091348 2070 0.999 - 0.999 - - - - - - - reticulon 3 [Source:ZFIN;Acc:ZDB-GENE-030710-5]
55. abhd17b ENSDARG00000035571 745 0.999 - 0.999 - - - - - - - abhydrolase domain containing 17B [Source:ZFIN;Acc:ZDB-GENE-040718-244]
56. zcchc14 ENSDARG00000101242 630 0.999 - 0.999 - - - - - - - zinc finger, CCHC domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-060503-319]
57. RBM33 RBM33 1954 0.999 - 0.999 - - - - - - -
58. si:dkeyp-44a8.2 ENSDARG00000092493 8308 0.999 - 0.999 - - - - - - - si:dkeyp-44a8.2 [Source:ZFIN;Acc:ZDB-GENE-070705-542]
59. plod1a ENSDARG00000059746 3364 0.999 - 0.999 - - - - - - - procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3165]
60. fras1 ENSDARG00000054619, ENSDARG00000114204 4459 0.999 - 0.999 - - - - - - - Fraser extracellular matrix complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-060526-68]
61. BX005368.2 BX005368.2 702 0.999 - 0.999 - - - - - - -
62. fgfrl1a ENSDARG00000032617 1546 0.999 - 0.999 - - - - - - - fibroblast growth factor receptor like 1a [Source:ZFIN;Acc:ZDB-GENE-040128-2]
63. pdgfrl ENSDARG00000006456, ENSDARG00000116983 1020 0.999 - 0.999 - - - - - - - platelet-derived growth factor receptor-like [Source:ZFIN;Acc:ZDB-GENE-040426-901]
64. slc25a36b ENSDARG00000015915 1750 0.999 - 0.999 - - - - - - - solute carrier family 25 (pyrimidine nucleotide carrier ), member 36b [Source:ZFIN;Acc:ZDB-GENE-080219-28]
65. pgm5 ENSDARG00000060745, ENSDARG00000114684 1083 0.999 - 0.999 - - - - - - - phosphoglucomutase 5 [Source:ZFIN;Acc:ZDB-GENE-060503-838]
66. tsn ENSDARG00000041830, ENSDARG00000111147 1268 0.999 - 0.999 - - - - - - - translin [Source:ZFIN;Acc:ZDB-GENE-030131-6039]
67. pwp1 ENSDARG00000015921 1160 0.999 - 0.999 - - - - - - - PWP1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1049]
68. usp7 ENSDARG00000073710 7017 0.999 - 0.999 - - - - - - - ubiquitin specific peptidase 7 (herpes virus-associated) [Source:ZFIN;Acc:ZDB-GENE-030131-3656]
69. PITPNC1 ENSDARG00000099260 1096 0.999 - 0.999 - - - - - - - phosphatidylinositol transfer protein cytoplasmic 1 [Source:HGNC Symbol;Acc:HGNC:21045]
70. pkmb ENSDARG00000099860 25094 0.999 - 0.999 - - - - - - - pyruvate kinase M1/2b [Source:ZFIN;Acc:ZDB-GENE-040801-230]
71. hoxc12b ENSDARG00000103133 1290 0.999 - 0.999 - - - - - - - homeobox C12b [Source:ZFIN;Acc:ZDB-GENE-000329-17]
72. nfyba ENSDARG00000039185 1804 0.999 - 0.999 - - - - - - - nuclear transcription factor Y, beta a [Source:ZFIN;Acc:ZDB-GENE-050417-13]
73. ptpreb ENSDARG00000021151 739 0.999 - 0.999 - - - - - - - protein tyrosine phosphatase, receptor type, E, b [Source:ZFIN;Acc:ZDB-GENE-060503-263]
74. dctn2 ENSDARG00000031388 3825 0.999 - 0.999 - - - - - - - dynactin 2 (p50) [Source:ZFIN;Acc:ZDB-GENE-040426-1279]
75. fynb ENSDARG00000025319 1175 0.999 - 0.999 - - - - - - - FYN proto-oncogene, Src family tyrosine kinase b [Source:ZFIN;Acc:ZDB-GENE-050706-89]
76. qdpra ENSDARG00000040190 4064 0.999 - 0.999 - - - - - - - quinoid dihydropteridine reductase a [Source:ZFIN;Acc:ZDB-GENE-070705-197]
77. ak4 ENSDARG00000006546 1528 0.999 - 0.999 - - - - - - - adenylate kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2505]
78. fam177a1 ENSDARG00000079636 2391 0.999 - 0.999 - - - - - - - family with sequence similarity 177, member A1 [Source:ZFIN;Acc:ZDB-GENE-070928-21]
79. pon1 ENSDARG00000032496 1375 0.999 - 0.999 - - - - - - - paraoxonase 1 [Source:ZFIN;Acc:ZDB-GENE-040912-6]
80. si:dkey-117m1.4 ENSDARG00000093120 1666 0.999 - 0.999 - - - - - - - si:dkey-117m1.4 [Source:ZFIN;Acc:ZDB-GENE-090313-177]
81. smg8 ENSDARG00000061378 1164 0.999 - 0.999 - - - - - - - SMG8 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-091204-279]
82. id4 ENSDARG00000045131 2916 0.999 - 0.999 - - - - - - - inhibitor of DNA binding 4 [Source:ZFIN;Acc:ZDB-GENE-051113-208]
83. abhd10b 2128 0.998 - 0.998 - - - - - - - abhydrolase domain containing 10b
84. ube2i2 ube2i2 4828 0.998 - 0.998 - - - - - - -
85. ddx21 ENSDARG00000063626 6695 0.998 - 0.998 - - - - - - - DEAD (Asp-Glu-Ala-Asp) box helicase 21 [Source:ZFIN;Acc:ZDB-GENE-031113-10]
86. SPEG SPEG 4017 0.997 - 0.997 - - - - - - -
87. tgm2a ENSDARG00000070157 4516 0.997 - 0.997 - - - - - - - transglutaminase 2, C polypeptide A [Source:ZFIN;Acc:ZDB-GENE-040912-78]
88. COLGALT1 ENSDARG00000073974 5069 0.997 - 0.997 - - - - - - - collagen beta(1-O)galactosyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-070720-6]
89. h2afy2_1 ENSDARG00000087897 9887 0.996 - 0.996 - - - - - - - H2A histone family, member Y2 [Source:ZFIN;Acc:ZDB-GENE-050913-114]
90. chd7 ENSDARG00000075211 12085 0.995 - 0.995 - - - - - - - chromodomain helicase DNA binding protein 7 [Source:ZFIN;Acc:ZDB-GENE-070912-179]
91. spcs2 ENSDARG00000042823 10032 0.994 - 0.994 - - - - - - - signal peptidase complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050320-32]
92. cks1b ENSDARG00000007971 2739 0.993 - - - - 0.993 - - - - CDC28 protein kinase regulatory subunit 1B [Source:ZFIN;Acc:ZDB-GENE-040801-112]
93. nkain1 ENSDARG00000006859 1961 0.993 - - - - 0.993 - - - - sodium/potassium transporting ATPase interacting 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1472]
94. gli2b ENSDARG00000020884 1468 0.992 - - - - 0.992 - - - - GLI family zinc finger 2b [Source:ZFIN;Acc:ZDB-GENE-050523-1]
95. sf3a2 ENSDARG00000021107 2929 0.992 - - - - 0.992 - - - - splicing factor 3a, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040426-897]
96. ncaph ENSDARG00000061468, ENSDARG00000113773 1401 0.991 - - - - 0.991 - - - - non-SMC condensin I complex, subunit H [Source:ZFIN;Acc:ZDB-GENE-070112-652]
97. CR387996.1 ENSDARG00000097774 3037 0.991 - - - - 0.991 - - - -
98. NDST1 NDST1 1584 0.991 - - - - 0.991 - - - -
99. rhbdd2 ENSDARG00000092463 937 0.99 - - - - 0.990 - - - - rhomboid domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-091204-359]
100. rnf20 ENSDARG00000016664 3641 0.99 - - - - 0.990 - - - - ring finger protein 20, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-130404-2]

There are 989 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA