Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for txnl1

Gene Name Gene ID Reads Annotation
txnl1 ENSDARG00000011921 692 thioredoxin-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-701]










Genes with expression patterns similar to txnl1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. txnl1 ENSDARG00000011921 692 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 thioredoxin-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-701]
2. ccnk ENSDARG00000034146 1255 3.201 0.912 - - 0.725 0.760 0.804 - - - cyclin K [Source:ZFIN;Acc:ZDB-GENE-030131-5126]
3. cnot8 ENSDARG00000020043 866 2.65 - 0.871 - 0.889 - 0.890 - - - CCR4-NOT transcription complex, subunit 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2845]
4. rwdd ENSDARG00000068256 964 2.5 0.842 - - - 0.749 0.909 - - - RWD domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-041010-61]
5. zgc:91909 ENSDARG00000021287 1488 2.423 0.711 0.769 - - - 0.943 - - - zgc:91909 [Source:ZFIN;Acc:ZDB-GENE-040704-16]
6. sde2 ENSDARG00000024124, ENSDARG00000109881 2342 2.271 0.770 0.700 - 0.801 - - - - - SDE2 telomere maintenance homolog (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-050417-270]
7. ccdc173 ENSDARG00000077928 260 1.849 - - - 0.908 - 0.941 - - - coiled-coil domain containing 173 [Source:ZFIN;Acc:ZDB-GENE-081104-457]
8. si:ch211-264e16.1 ENSDARG00000068947 1358 1.837 0.887 - - - - 0.950 - - - si:ch211-264e16.1 [Source:ZFIN;Acc:ZDB-GENE-060503-226]
9. grp ENSDARG00000043074 747 1.83 0.890 - - - - 0.940 - - - gastrin-releasing peptide [Source:ZFIN;Acc:ZDB-GENE-060526-117]
10. gdap1l1 ENSDARG00000028628 233 1.83 0.904 - - - - 0.926 - - - ganglioside induced differentiation associated protein 1-like 1 [Source:ZFIN;Acc:ZDB-GENE-080812-2]
11. lamtor5 ENSDARG00000090194, ENSDARG00000115255 2539 1.822 0.911 - - - - 0.911 - - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 [Source:ZFIN;Acc:ZDB-GENE-110411-193]
12. mctp2a ENSDARG00000001414 307 1.812 - - - 0.905 - 0.907 - - - multiple C2 domains, transmembrane 2a [Source:ZFIN;Acc:ZDB-GENE-040724-63]
13. si:dkey-169i5.4 ENSDARG00000077862 511 1.8 0.825 - - - - 0.975 - - - si:dkey-169i5.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8695]
14. cmtm6 ENSDARG00000099631 641 1.793 0.866 - - 0.927 - - - - - CKLF-like MARVEL transmembrane domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-030729-15]
15. tm9sf3 ENSDARG00000028748, ENSDARG00000111288 4546 1.791 0.931 - - - - 0.860 - - - transmembrane 9 superfamily member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2714]
16. zmym4 ENSDARG00000035823 347 1.787 - - - 0.879 - 0.908 - - - zinc finger, MYM-type 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5459]
17. KPNA6 ENSDARG00000044980 543 1.786 - - - 0.879 - 0.907 - - - karyopherin alpha 6 (importin alpha 7) [Source:ZFIN;Acc:ZDB-GENE-130530-626]
18. tmem154 ENSDARG00000074776 454 1.783 - 0.882 - - - 0.901 - - - transmembrane protein 154 [Source:ZFIN;Acc:ZDB-GENE-030131-2401]
19. elovl6l ENSDARG00000038639 1184 1.777 0.836 - - - - 0.941 - - - ELOVL family member 6, elongation of long chain fatty acids like [Source:ZFIN;Acc:ZDB-GENE-031110-3]
20. cldnf ENSDARG00000043133 1006 1.753 0.819 - - - - 0.934 - - - claudin f [Source:ZFIN;Acc:ZDB-GENE-010328-6]
21. usp49 ENSDARG00000000229 706 1.751 0.883 - - 0.868 - - - - - ubiquitin specific peptidase 49 [Source:ZFIN;Acc:ZDB-GENE-050208-484]
22. INO80B ENSDARG00000062749 844 1.746 - - - 0.881 - 0.865 - - - INO80 complex subunit B [Source:ZFIN;Acc:ZDB-GENE-061013-69]
23. phf14 ENSDARG00000061458 492 1.743 0.858 - - - - 0.885 - - - PHD finger protein 14 [Source:ZFIN;Acc:ZDB-GENE-030131-1796]
24. lzic ENSDARG00000055899 638 1.739 0.893 - - 0.846 - - - - - leucine zipper and CTNNBIP1 domain containing [Source:ZFIN;Acc:ZDB-GENE-040718-342]
25. C6H6orf106 C6H6orf106 2940 1.729 0.858 - - 0.871 - - - - -
26. AIM1L AIM1L 899 1.726 - 0.782 - - - 0.944 - - -
27. si:ch211-210c8.6 ENSDARG00000017811 908 1.723 0.809 - - - - 0.914 - - - si:ch211-210c8.6 [Source:ZFIN;Acc:ZDB-GENE-030131-3630]
28. far1 ENSDARG00000006899 204 1.721 - 0.819 - 0.902 - - - - - fatty acyl CoA reductase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2908]
29. si:dkey-240e12.6 ENSDARG00000110137 674 1.718 - - - 0.779 - 0.939 - - - si:dkey-240e12.6 [Source:ZFIN;Acc:ZDB-GENE-050208-367]
30. tspan18b ENSDARG00000015015 1433 1.717 0.854 - - - - 0.863 - - - tetraspanin 18b [Source:ZFIN;Acc:ZDB-GENE-040718-137]
31. atp2a3 ENSDARG00000060978 1408 1.713 0.847 0.866 - - - - - - - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3 [Source:ZFIN;Acc:ZDB-GENE-060531-103]
32. C11H19orf25 C11H19orf25 491 1.712 0.886 - - 0.826 - - - - -
33. adam15 ENSDARG00000089213 359 1.711 - 0.775 - - - 0.936 - - - ADAM metallopeptidase domain 15 [Source:ZFIN;Acc:ZDB-GENE-070809-4]
34. rabl6 rabl6 489 1.71 0.847 0.863 - - - - - - -
35. CACHD1 ENSDARG00000061590 1287 1.707 - - - 0.829 - 0.878 - - - cache domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100819-3]
36. SCARF2 1117 1.702 - - - - - 0.874 0.828 - - scavenger receptor class F, member 2
37. fa2h ENSDARG00000090063 1084 1.699 0.814 - - - - 0.885 - - - fatty acid 2-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-031219-4]
38. srp19 ENSDARG00000035699 2624 1.689 0.899 - - - - 0.790 - - - signal recognition particle 19 [Source:ZFIN;Acc:ZDB-GENE-040426-2657]
39. CCDC64B CCDC64B 337 1.685 - 0.756 - - - 0.929 - - -
40. si:dkeyp-104h9.5 ENSDARG00000073801 722 1.682 - 0.744 - - - 0.938 - - - si:dkeyp-104h9.5 [Source:ZFIN;Acc:ZDB-GENE-081104-449]
41. ECI2 ENSDARG00000102412 848 1.68 - - - 0.921 - - 0.759 - - enoyl-CoA delta isomerase 2 [Source:ZFIN;Acc:ZDB-GENE-040718-392]
42. CARKD 1398 1.676 0.882 - - - - 0.794 - - - carbohydrate kinase domain containing, transcript variant X7
43. MRPL52 ENSDARG00000090568 4402 1.675 0.843 - - 0.832 - - - - - mitochondrial ribosomal protein L52 [Source:ZFIN;Acc:ZDB-GENE-110325-1]
44. PCSK6 ENSDARG00000104574 710 1.673 - - - - - 0.923 - 0.750 - proprotein convertase subtilisin/kexin type 6 [Source:ZFIN;Acc:ZDB-GENE-100908-1]
45. SEC24B ENSDARG00000071906 1018 1.668 - - - 0.782 - 0.886 - - - SEC24 homolog B, COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-030131-6565]
46. gnpnat1 ENSDARG00000039892 709 1.663 - - - 0.873 - 0.790 - - - glucosamine-phosphate N-acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-050522-450]
47. tjp3 ENSDARG00000002909 1978 1.659 0.769 - - - - 0.890 - - - tight junction protein 3 [Source:ZFIN;Acc:ZDB-GENE-030828-10]
48. magt1 ENSDARG00000058062 3903 1.653 0.808 - - - - 0.845 - - - magnesium transporter 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3667]
49. SH3D21 ENSDARG00000099448 1726 1.652 0.746 - - - - 0.906 - - - SH3 domain containing 21 [Source:ZFIN;Acc:ZDB-GENE-051120-57]
50. smim8 ENSDARG00000071040 622 1.651 - - - - - 0.907 0.744 - - small integral membrane protein 8 [Source:ZFIN;Acc:ZDB-GENE-050522-423]
51. rprd2a ENSDARG00000058089 743 1.649 - - - 0.711 - 0.938 - - - regulation of nuclear pre-mRNA domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-030131-6641]
52. elp3 ENSDARG00000042005 936 1.649 - 0.745 - - - 0.904 - - - elongator acetyltransferase complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-050327-35]
53. aftpha ENSDARG00000069249 867 1.645 - 0.766 - 0.879 - - - - - aftiphilin a [Source:ZFIN;Acc:ZDB-GENE-030131-1437]
54. ef1 1343 1.642 0.764 - - - - 0.878 - - - E74-like factor 1 (ets domain transcription factor), transcript variant X4
55. mgst1 mgst1 2820 1.641 0.736 - - - - 0.905 - - -
56. lrrfip2 ENSDARG00000010400 2633 1.639 0.751 - - 0.888 - - - - - leucine rich repeat (in FLII) interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7781]
57. gpcpd1 ENSDARG00000016011 2563 1.639 0.849 - - - - 0.790 - - - glycerophosphocholine phosphodiesterase 1 [Source:ZFIN;Acc:ZDB-GENE-060503-472]
58. chmp3 ENSDARG00000038064 577 1.638 0.858 0.780 - - - - - - - charged multivesicular body protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2600]
59. pip5k1aa ENSDARG00000100396 1644 1.636 - - - 0.728 - 0.908 - - - phosphatidylinositol-4-phosphate 5-kinase, type I, alpha, a [Source:ZFIN;Acc:ZDB-GENE-050522-517]
60. gnl3l ENSDARG00000020595, ENSDARG00000109309 3582 1.633 - - - - - 0.917 0.716 - - guanine nucleotide binding protein-like 3 (nucleolar)-like [Source:ZFIN;Acc:ZDB-GENE-040723-1]
61. synj2bp ENSDARG00000028321 1143 1.633 0.865 0.768 - - - - - - - synaptojanin 2 binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-6531]
62. vta1 ENSDARG00000013732 6072 1.632 0.844 - - - - 0.788 - - - vesicle (multivesicular body) trafficking 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2154]
63. bub3 ENSDARG00000075883 1333 1.628 0.845 0.783 - - - - - - - BUB3 mitotic checkpoint protein [Source:ZFIN;Acc:ZDB-GENE-041010-210]
64. abca1a ENSDARG00000074635 1085 1.627 0.762 - - 0.865 - - - - - ATP-binding cassette, sub-family A (ABC1), member 1A [Source:ZFIN;Acc:ZDB-GENE-031006-12]
65. chd1l ENSDARG00000015471 1142 1.627 0.806 0.821 - - - - - - - chromodomain helicase DNA binding protein 1-like [Source:ZFIN;Acc:ZDB-GENE-040426-892]
66. CR847496.2 ENSDARG00000116070 802 1.627 - - - 0.714 - 0.913 - - - platelet derived growth factor c [Source:NCBI gene;Acc:560564]
67. zgc:154018 zgc:154018 362 1.626 0.866 0.760 - - - - - - -
68. FP102272.1 FP102272.1 9473 1.626 0.912 - - - - 0.714 - - -
69. CABIN1 ENSDARG00000079326 905 1.625 - 0.749 - 0.876 - - - - - calcineurin binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1735]
70. ik ENSDARG00000004161 3132 1.621 - - - 0.716 - 0.905 - - - IK cytokine [Source:ZFIN;Acc:ZDB-GENE-030131-960]
71. rnf220a ENSDARG00000060929 693 1.62 - - - 0.837 - - - 0.783 - ring finger protein 220a [Source:ZFIN;Acc:ZDB-GENE-060929-1006]
72. ubl3b ENSDARG00000021556 1210 1.616 - - - 0.829 0.787 - - - - ubiquitin-like 3b [Source:ZFIN;Acc:ZDB-GENE-040630-4]
73. ankrd22 ENSDARG00000002298 261 1.615 0.813 0.802 - - - - - - - ankyrin repeat domain 22 [Source:ZFIN;Acc:ZDB-GENE-040426-1120]
74. ptpn23a ENSDARG00000070124 1206 1.609 - - - 0.867 - 0.742 - - - protein tyrosine phosphatase, non-receptor type 23, a [Source:ZFIN;Acc:ZDB-GENE-100921-24]
75. rbm34 ENSDARG00000101877 1573 1.606 - - - 0.701 - 0.905 - - - RNA binding motif protein 34 [Source:ZFIN;Acc:ZDB-GENE-040718-77]
76. CACUL1 ENSDARG00000021885 691 1.603 - - - - - 0.878 0.725 - - CDK2 associated cullin domain 1 [Source:ZFIN;Acc:ZDB-GENE-170113-2]
77. tom1 ENSDARG00000104581 1457 1.599 0.817 - - - - 0.782 - - - target of myb1 membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-060721-1]
78. rnf170 ENSDARG00000104069 838 1.593 0.785 0.808 - - - - - - - ring finger protein 170 [Source:ZFIN;Acc:ZDB-GENE-040426-2572]
79. cbfa2t2 ENSDARG00000074337 4323 1.591 - 0.793 - - - 0.798 - - - core-binding factor, runt domain, alpha subunit 2; translocated to, 2 [Source:ZFIN;Acc:ZDB-GENE-070209-1]
80. SHROOM3 ENSDARG00000102180 419 1.589 - - - 0.750 - - 0.839 - - shroom family member 3 [Source:ZFIN;Acc:ZDB-GENE-120817-1]
81. stxbp2 ENSDARG00000007603 1646 1.584 - - - 0.774 - 0.810 - - - syntaxin binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2482]
82. golga7 ENSDARG00000057676 4691 1.582 0.775 - - 0.807 - - - - - golgin A7 [Source:ZFIN;Acc:ZDB-GENE-040625-142]
83. csnk1g2a ENSDARG00000005458 2917 1.58 - 0.752 - - - 0.828 - - - casein kinase 1, gamma 2a [Source:ZFIN;Acc:ZDB-GENE-030131-6445]
84. wu:fc34e06 1793 1.577 0.858 - - - - 0.719 - - - wu:fc34e06, transcript variant X10
85. babam1 ENSDARG00000077526 776 1.577 - - - 0.835 0.742 - - - - BRISC and BRCA1 A complex member 1 [Source:ZFIN;Acc:ZDB-GENE-040808-6]
86. CHST5 CHST5 1293 1.577 0.759 - - - - 0.818 - - -
87. ajuba ENSDARG00000077842 1152 1.573 0.838 - - - - 0.735 - - - ajuba LIM protein [Source:ZFIN;Acc:ZDB-GENE-030131-9341]
88. rbm17 ENSDARG00000031346 2079 1.57 - 0.711 - - - 0.859 - - - RNA binding motif protein 17 [Source:ZFIN;Acc:ZDB-GENE-040426-817]
89. C3H16orf72 C3H16orf72 2059 1.57 0.830 0.740 - - - - - - -
90. tjp2a ENSDARG00000063309 1947 1.565 - 0.727 - - - 0.838 - - - tight junction protein 2a (zona occludens 2) [Source:ZFIN;Acc:ZDB-GENE-070925-2]
91. ctcf ENSDARG00000056621, ENSDARG00000113285 1750 1.565 - - - 0.832 - 0.733 - - - CCCTC-binding factor (zinc finger protein) [Source:ZFIN;Acc:ZDB-GENE-040624-5]
92. TMEM185A TMEM185A 5505 1.562 - - - 0.836 - - 0.726 - -
93. asb13b ENSDARG00000089833 251 1.559 - 0.781 - - 0.778 - - - - ankyrin repeat and SOCS box containing 13b [Source:ZFIN;Acc:ZDB-GENE-091118-116]
94. tmem243b ENSDARG00000033179, ENSDARG00000114077, ENSDARG00000116817 1171 1.551 - - - 0.776 - 0.775 - - - transmembrane protein 243, mitochondrial b [Source:ZFIN;Acc:ZDB-GENE-040426-2205]
95. WDR53 ENSDARG00000079659 485 1.547 - 0.816 - 0.731 - - - - - WD repeat domain 53 [Source:ZFIN;Acc:ZDB-GENE-131121-294]
96. nkap ENSDARG00000033450, ENSDARG00000116152 1929 1.541 - - - - - 0.714 0.827 - - NFKB activating protein [Source:ZFIN;Acc:ZDB-GENE-030131-8064]
97. fam120c ENSDARG00000019205 1365 1.54 - - - 0.740 - - 0.800 - - family with sequence similarity 120C [Source:ZFIN;Acc:ZDB-GENE-090313-228]
98. SHC3 ENSDARG00000098909 332 1.539 - - - 0.771 0.768 - - - - SHC adaptor protein 3 [Source:HGNC Symbol;Acc:HGNC:18181]
99. gpm6bb ENSDARG00000001676 2005 1.539 - 0.701 - 0.838 - - - - - glycoprotein M6Bb [Source:ZFIN;Acc:ZDB-GENE-030710-10]
100. snai1a ENSDARG00000056995 1427 1.538 - - - 0.826 - - 0.712 - - snail family zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-990415-255]

There are 1744 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA