Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for twsg1a

Gene Name Gene ID Reads Annotation
twsg1a ENSDARG00000104244 622 twisted gastrulation BMP signaling modulator 1a [Source:ZFIN;Acc:ZDB-GENE-010509-2]










Genes with expression patterns similar to twsg1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. twsg1a ENSDARG00000104244 622 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 twisted gastrulation BMP signaling modulator 1a [Source:ZFIN;Acc:ZDB-GENE-010509-2]
2. wdr37 ENSDARG00000074611 468 1.478 - - - 0.731 - - 0.747 - - WD repeat domain 37 [Source:ZFIN;Acc:ZDB-GENE-030131-8101]
3. PPIL3 ENSDARG00000033370 714 1.476 - 0.747 - 0.729 - - - - - peptidylprolyl isomerase (cyclophilin)-like 3 [Source:ZFIN;Acc:ZDB-GENE-040625-159]
4. usp16 ENSDARG00000060633 684 0.919 - - - - - - 0.919 - - ubiquitin specific peptidase 16 [Source:ZFIN;Acc:ZDB-GENE-030131-4153]
5. eefsec ENSDARG00000004696 791 0.863 - - - - - - 0.863 - - eukaryotic elongation factor, selenocysteine-tRNA-specific [Source:ZFIN;Acc:ZDB-GENE-051120-72]
6. rnf185 ENSDARG00000032997 1490 0.863 - - - - - 0.863 - - - ring finger protein 185 [Source:ZFIN;Acc:ZDB-GENE-040426-1977]
7. RALGAPB ENSDARG00000088899 1456 0.857 - - - - - - 0.857 - - Ral GTPase activating protein, beta subunit (non-catalytic) [Source:ZFIN;Acc:ZDB-GENE-130530-945]
8. leprel2 leprel2 812 0.85 - 0.850 - - - - - - -
9. bccip ENSDARG00000004948 593 0.849 - - - - - - 0.849 - - BRCA2 and CDKN1A interacting protein [Source:ZFIN;Acc:ZDB-GENE-050320-39]
10. elp3 ENSDARG00000042005 936 0.843 - - - - - - 0.843 - - elongator acetyltransferase complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-050327-35]
11. med28 ENSDARG00000037410, ENSDARG00000112591, ENSDARG00000113633, ENSDARG00000117136 629 0.835 - - - 0.835 - - - - - mediator complex subunit 28 [Source:ZFIN;Acc:ZDB-GENE-041121-4]
12. csnk1g2a ENSDARG00000005458 2917 0.83 - - - - - - 0.830 - - casein kinase 1, gamma 2a [Source:ZFIN;Acc:ZDB-GENE-030131-6445]
13. pacsin2 ENSDARG00000078014 1582 0.825 - - - 0.825 - - - - - protein kinase C and casein kinase substrate in neurons 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2596]
14. dhx9 ENSDARG00000079725 1241 0.822 - - - - - - 0.822 - - DEAH (Asp-Glu-Ala-His) box helicase 9 [Source:ZFIN;Acc:ZDB-GENE-070912-171]
15. hsdl2 ENSDARG00000002523 2746 0.821 - - - - - - 0.821 - - hydroxysteroid dehydrogenase like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1066]
16. rad18 ENSDARG00000027938 574 0.82 0.820 - - - - - - - - RAD18 E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040426-745]
17. hoxa13a ENSDARG00000100312 543 0.818 - - - 0.818 - - - - - homeobox A13a [Source:ZFIN;Acc:ZDB-GENE-990415-5]
18. eif3ja ENSDARG00000012603 6324 0.818 - - - - - - 0.818 - - eukaryotic translation initiation factor 3, subunit Ja [Source:ZFIN;Acc:ZDB-GENE-040426-1266]
19. grpel1 ENSDARG00000010021 3055 0.813 - - - - - - 0.813 - - GrpE-like 1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-051120-111]
20. haus3 ENSDARG00000061385, ENSDARG00000110959 343 0.811 - - - 0.811 - - - - - HAUS augmin-like complex, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-060929-592]
21. unc119.1 ENSDARG00000009629 1193 0.808 - - - - - - 0.808 - - unc-119 homolog 1 [Source:ZFIN;Acc:ZDB-GENE-030219-130]
22. MARK3 MARK3 1767 0.807 - - - - - - 0.807 - -
23. march5l ENSDARG00000028559 943 0.806 - - - - - - 0.806 - - membrane-associated ring finger (C3HC4) 5, like [Source:ZFIN;Acc:ZDB-GENE-030131-4792]
24. dpp6b ENSDARG00000024744 234 0.806 - - - 0.806 - - - - - dipeptidyl-peptidase 6b [Source:ZFIN;Acc:ZDB-GENE-070705-88]
25. marveld1 ENSDARG00000011724 1025 0.804 - - - - - - 0.804 - - MARVEL domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050208-33]
26. INO80B ENSDARG00000062749 844 0.801 - - - - - - 0.801 - - INO80 complex subunit B [Source:ZFIN;Acc:ZDB-GENE-061013-69]
27. dnajb12a ENSDARG00000039363 1072 0.8 - - - - - 0.800 - - - DnaJ (Hsp40) homolog, subfamily B, member 12a [Source:ZFIN;Acc:ZDB-GENE-030131-2725]
28. mkln1 ENSDARG00000025576 1122 0.799 - - - - - - 0.799 - - muskelin 1, intracellular mediator containing kelch motifs [Source:ZFIN;Acc:ZDB-GENE-030131-3942]
29. gpr22 gpr22 115 0.798 0.798 - - - - - - - -
30. si:ch73-211l13.2 ENSDARG00000095974 792 0.798 - - - - - - 0.798 - - si:ch73-211l13.2 [Source:ZFIN;Acc:ZDB-GENE-110411-257]
31. FP236813.1 FP236813.1 1842 0.797 - - - - - 0.797 - - -
32. zgc:66447 ENSDARG00000025577, ENSDARG00000111229 744 0.797 - - - - - - 0.797 - - zgc:66447 [Source:ZFIN;Acc:ZDB-GENE-030131-4748]
33. blnk ENSDARG00000042722 56 0.797 - - - - - - 0.797 - - B cell linker [Source:ZFIN;Acc:ZDB-GENE-040702-4]
34. prpf18 ENSDARG00000058306, ENSDARG00000113879 512 0.795 - - - - - - 0.795 - - PRP18 pre-mRNA processing factor 18 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040704-45]
35. CABZ01071911.1 CABZ01071911.1 385 0.795 - - - - - - 0.795 - -
36. ALMS1 ENSDARG00000074779 900 0.795 0.795 - - - - - - - - Alstrom syndrome protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4837]
37. vps13d ENSDARG00000017986 183 0.794 - - - 0.794 - - - - - vacuolar protein sorting 13 homolog D (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050912-1]
38. clk2b ENSDARG00000059870 525 0.794 - - - 0.794 - - - - - CDC-like kinase 2b [Source:ZFIN;Acc:ZDB-GENE-060929-1126]
39. sema3ga ENSDARG00000042545 1603 0.793 - - - 0.793 - - - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Ga [Source:ZFIN;Acc:ZDB-GENE-050513-3]
40. ubfd1 ENSDARG00000102827 966 0.793 - - - - - - 0.793 - - ubiquitin family domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050506-90]
41. ntd5 ENSDARG00000040944 4988 0.793 - - - 0.793 - - - - - ntl-dependent gene 5 [Source:ZFIN;Acc:ZDB-GENE-031030-7]
42. yipf3 ENSDARG00000020449 3312 0.792 - - - - - - 0.792 - - Yip1 domain family, member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6443]
43. cdk16 ENSDARG00000032072 1993 0.791 - - - 0.791 - - - - - cyclin-dependent kinase 16 [Source:ZFIN;Acc:ZDB-GENE-030131-2939]
44. nol9 ENSDARG00000077751 2471 0.79 - - - - - - 0.790 - - nucleolar protein 9 [Source:ZFIN;Acc:ZDB-GENE-070629-1]
45. efemp2b ENSDARG00000020811 116 0.789 - - - 0.789 - - - - - EGF containing fibulin extracellular matrix protein 2b [Source:ZFIN;Acc:ZDB-GENE-030219-125]
46. CABZ01067868.1 CABZ01067868.1 235 0.787 - - - 0.787 - - - - -
47. si:dkey-226l10.6 ENSDARG00000087483 1651 0.785 - - - - - - 0.785 - - si:dkey-226l10.6 [Source:ZFIN;Acc:ZDB-GENE-030131-1550]
48. tecpr2 ENSDARG00000060835 491 0.785 - - - 0.785 - - - - - tectonin beta-propeller repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-060503-358]
49. wdr74 ENSDARG00000061993, ENSDARG00000111467, ENSDARG00000115634 416 0.785 - 0.785 - - - - - - - WD repeat domain 74 [Source:ZFIN;Acc:ZDB-GENE-060929-1138]
50. abi2a ENSDARG00000058207, ENSDARG00000111927 2574 0.783 - 0.783 - - - - - - - abl-interactor 2a [Source:ZFIN;Acc:ZDB-GENE-060929-192]
51. sema3fa ENSDARG00000011163 759 0.782 - - - - - - 0.782 - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fa [Source:ZFIN;Acc:ZDB-GENE-050513-1]
52. cetn3 ENSDARG00000011825 1087 0.781 - - - 0.781 - - - - - centrin 3 [Source:ZFIN;Acc:ZDB-GENE-050522-152]
53. cbll1 ENSDARG00000015222 995 0.781 - - - - - - 0.781 - - Cbl proto-oncogene-like 1, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040426-691]
54. sod1 ENSDARG00000043848 1514 0.781 - - - - - - 0.781 - - superoxide dismutase 1, soluble [Source:ZFIN;Acc:ZDB-GENE-990415-258]
55. mccc2 ENSDARG00000017571 5635 0.781 - - - - - - 0.781 - - methylcrotonoyl-CoA carboxylase 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-040426-2493]
56. rbfox3l rbfox3l 34 0.779 0.779 - - - - - - - -
57. tspan18b ENSDARG00000015015 1433 0.778 - - - - - - 0.778 - - tetraspanin 18b [Source:ZFIN;Acc:ZDB-GENE-040718-137]
58. crabp1b ENSDARG00000035904 2753 0.778 - - - 0.778 - - - - - cellular retinoic acid binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040624-3]
59. her4.1 ENSDARG00000056732 1264 0.777 - 0.777 - - - - - - - hairy-related 4, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-980526-521]
60. uncx4.1 ENSDARG00000037760 472 0.776 - - - 0.776 - - - - - Unc4.1 homeobox (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-050714-1]
61. stx4 ENSDARG00000052518 1848 0.775 - - - - - 0.775 - - - syntaxin 4 [Source:ZFIN;Acc:ZDB-GENE-030131-2455]
62. mmp14b ENSDARG00000008388, ENSDARG00000111313 2125 0.775 - - - - - - 0.775 - - matrix metallopeptidase 14b (membrane-inserted) [Source:ZFIN;Acc:ZDB-GENE-030901-2]
63. SMAD4 SMAD4 3233 0.774 - - - - - - 0.774 - -
64. si:dkey-86e18.1 ENSDARG00000043536 75 0.774 0.774 - - - - - - - - si:dkey-86e18.1 [Source:ZFIN;Acc:ZDB-GENE-041014-18]
65. mapk8ip2 ENSDARG00000063157 467 0.774 - - - 0.774 - - - - - mitogen-activated protein kinase 8 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-070705-326]
66. naa40 ENSDARG00000024109, ENSDARG00000090570 4759 0.774 - - - - - - 0.774 - - N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050417-105]
67. gins4 ENSDARG00000016044 671 0.774 - 0.774 - - - - - - - GINS complex subunit 4 (Sld5 homolog) [Source:ZFIN;Acc:ZDB-GENE-040801-59]
68. SERP1_1 ENSDARG00000076223 6668 0.772 - - - 0.772 - - - - - stress associated endoplasmic reticulum protein 1 [Source:HGNC Symbol;Acc:HGNC:10759]
69. pdcd11 ENSDARG00000052480 2791 0.772 - - - - - - 0.772 - - programmed cell death 11 [Source:ZFIN;Acc:ZDB-GENE-030131-4076]
70. fkbp4 ENSDARG00000008447 3736 0.771 - - - - - - 0.771 - - FK506 binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-514]
71. tmco3 ENSDARG00000075108 368 0.77 - 0.770 - - - - - - - transmembrane and coiled-coil domains 3 [Source:ZFIN;Acc:ZDB-GENE-071030-1]
72. med23 ENSDARG00000029157 4453 0.77 - - - - - - 0.770 - - mediator complex subunit 23 [Source:ZFIN;Acc:ZDB-GENE-040724-82]
73. klf11a ENSDARG00000030844 3972 0.768 - - - - - 0.768 - - - Kruppel-like factor 11a [Source:ZFIN;Acc:ZDB-GENE-030131-3568]
74. MTRF1 ENSDARG00000033579 107 0.767 0.767 - - - - - - - - mitochondrial translational release factor 1 [Source:ZFIN;Acc:ZDB-GENE-050220-8]
75. ctsc ENSDARG00000101334 3691 0.767 - - - - - - 0.767 - - cathepsin C [Source:ZFIN;Acc:ZDB-GENE-030619-9]
76. krr1 ENSDARG00000011246 1624 0.767 - - - - - - 0.767 - - KRR1, small subunit (SSU) processome component, homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-060623-10]
77. ripk4 ENSDARG00000043211 775 0.767 - - - 0.767 - - - - - receptor-interacting serine-threonine kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2042]
78. sirt5 ENSDARG00000039684 472 0.766 - - - - - - 0.766 - - sirtuin 5 [Source:ZFIN;Acc:ZDB-GENE-040718-349]
79. api5 ENSDARG00000033597 6655 0.765 - - - - - - 0.765 - - apoptosis inhibitor 5 [Source:ZFIN;Acc:ZDB-GENE-030131-395]
80. schip1 ENSDARG00000035175 3838 0.765 - - - - - - 0.765 - - schwannomin interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-466]
81. fam212ab 454 0.764 - - - - - 0.764 - - - family with sequence similarity 212, member Ab
82. tmem107l ENSDARG00000088398, ENSDARG00000109909 208 0.764 - 0.764 - - - - - - - transmembrane protein 107 like [Source:ZFIN;Acc:ZDB-GENE-090313-269]
83. fbxo18 ENSDARG00000062983, ENSDARG00000113423 1458 0.763 0.763 - - - - - - - - F-box protein helicase 1 [Source:ZFIN;Acc:ZDB-GENE-041210-99]
84. cry5 ENSDARG00000019498 90 0.763 0.763 - - - - - - - - cryptochrome circadian clock 5 [Source:ZFIN;Acc:ZDB-GENE-010426-8]
85. zgc:162944 ENSDARG00000069846, ENSDARG00000112524 3898 0.763 - - - - - - 0.763 - - zgc:162944 [Source:ZFIN;Acc:ZDB-GENE-070424-75]
86. csk ENSDARG00000067996 834 0.762 - 0.762 - - - - - - - C-terminal Src kinase [Source:ZFIN;Acc:ZDB-GENE-061103-493]
87. cdk5r2b ENSDARG00000078671 20 0.762 0.762 - - - - - - - - cyclin-dependent kinase 5, regulatory subunit 2b (p39) [Source:ZFIN;Acc:ZDB-GENE-040801-251]
88. snrka ENSDARG00000070832 1366 0.762 - - - - - - 0.762 - - SNF related kinase a [Source:ZFIN;Acc:ZDB-GENE-040718-84]
89. LRRC8A LRRC8A 406 0.761 - - - 0.761 - - - - -
90. gb:bc139653 gb:bc139653 239 0.761 - - - - - 0.761 - - -
91. qsox1 ENSDARG00000039459 320 0.759 - - - 0.759 - - - - - quiescin Q6 sulfhydryl oxidase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7019]
92. BX908793.1 BX908793.1 573 0.759 - - - - - 0.759 - - -
93. neurl4 ENSDARG00000078127, ENSDARG00000116566 334 0.759 0.759 - - - - - - - - neuralized E3 ubiquitin protein ligase 4 [Source:ZFIN;Acc:ZDB-GENE-100318-4]
94. ppp2r4 1005 0.759 - - - - - 0.759 - - - protein phosphatase 2A activator, regulatory subunit 4
95. WDFY3 ENSDARG00000078890 2092 0.759 - - - - - - 0.759 - - WD repeat and FYVE domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070705-153]
96. snx6 ENSDARG00000058444 2645 0.758 - - - 0.758 - - - - - sorting nexin 6 [Source:ZFIN;Acc:ZDB-GENE-050913-152]
97. zgc:92061 zgc:92061 21304 0.757 - - - 0.757 - - - - -
98. dock5 ENSDARG00000001968 467 0.757 - - - - - 0.757 - - - dedicator of cytokinesis 5 [Source:ZFIN;Acc:ZDB-GENE-080108-4]
99. Mar-06 Mar-06 953 0.757 - - - - - - 0.757 - -
100. CABZ01069576.1 CABZ01069576.1 202 0.756 - 0.756 - - - - - - -

There are 198 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA