Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for twist1b

Gene Name Gene ID Reads Annotation
twist1b ENSDARG00000076010 88 twist family bHLH transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-050417-357]










Genes with expression patterns similar to twist1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. twist1b ENSDARG00000076010 88 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 twist family bHLH transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-050417-357]
2. adal ENSDARG00000012986, ENSDARG00000111306 77 2 1.000 - - - - - 1.000 - - adenosine deaminase-like [Source:ZFIN;Acc:ZDB-GENE-050913-145]
3. AC024175.11 AC024175.11 12 1.805 0.805 - - - - - 1.000 - -
4. chd3 ENSDARG00000021405, ENSDARG00000115235 17 1.751 0.805 0.946 - - - - - - - chromodomain helicase DNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-121031-4]
5. prox1b ENSDARG00000088810, ENSDARG00000113014 33 1.659 - 0.946 - - - - 0.713 - - prospero homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-050107-3]
6. BX005106.1 BX005106.1 22 1.633 0.805 - 0.828 - - - - - -
7. mgrn1b ENSDARG00000004796 18 1.62 - - 0.907 - - - 0.713 - - mahogunin, ring finger 1b [Source:ZFIN;Acc:ZDB-GENE-110401-3]
8. plce1 ENSDARG00000087921 44 1.548 0.835 - - - - - 0.713 - - phospholipase C, epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-061212-4]
9. hmha1 hmha1 58 1.541 0.805 - - - - - 0.736 - -
10. stx11b.2 ENSDARG00000042231, ENSDARG00000110079 68 1.535 - - - - 0.790 0.745 - - - syntaxin 11b, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-050417-148]
11. pofut2 ENSDARG00000045175 6 1.518 0.805 - - - - - 0.713 - - protein O-fucosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3595]
12. gbp3 ENSDARG00000003244 90 1.518 0.805 - - - - - 0.713 - - guanylate binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-070912-176]
13. zgc:113227 ENSDARG00000058874 266 1.514 - - - - - 0.758 0.756 - - zgc:113227 [Source:ZFIN;Acc:ZDB-GENE-050327-32]
14. gatsl3 7 1.511 - 0.798 - - - - 0.713 - - GATS protein-like 3
15. PAMR1 ENSDARG00000093480 40 1.509 0.805 - - - - 0.704 - - - peptidase domain containing associated with muscle regeneration 1 [Source:ZFIN;Acc:ZDB-GENE-100422-12]
16. il2rb ENSDARG00000075720 116 1.467 0.701 - - - - 0.766 - - - interleukin 2 receptor, beta [Source:ZFIN;Acc:ZDB-GENE-080108-2]
17. BX323050.1 BX323050.1 116 1.461 0.730 - - - - 0.731 - - -
18. zgc:158852 ENSDARG00000102076 65 1.433 0.726 - - - - 0.707 - - - zgc:158852 [Source:ZFIN;Acc:ZDB-GENE-070112-972]
19. fgf11b ENSDARG00000043907 16 1 - - - - - - 1.000 - - fibroblast growth factor 11b [Source:ZFIN;Acc:ZDB-GENE-100316-2]
20. gsc ENSDARG00000059073, ENSDARG00000111184, ENSDARG00000115937 152 1 - - - - - - 1.000 - - goosecoid [Source:ZFIN;Acc:ZDB-GENE-980528-2060]
21. CR788231.1 CR788231.1 61 1 1.000 - - - - - - - -
22. TECPR1 TECPR1 173 1 1.000 - - - - - - - -
23. CABZ01100267.1 CABZ01100267.1 104 1 - - - - - - 1.000 - -
24. pdgfra ENSDARG00000070494, ENSDARG00000113952 6 1 1.000 - - - - - - - - platelet-derived growth factor receptor, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-208]
25. si:dkey-32e23.4 ENSDARG00000063159 28 1 1.000 - - - - - - - - si:dkey-32e23.4 [Source:ZFIN;Acc:ZDB-GENE-081105-41]
26. si:ch211-281p14.2 22 1 1.000 - - - - - - - - si:ch211-281p14.2, transcript variant X2
27. avpr1b avpr1b 58 1 - - - - - - 1.000 - -
28. GPR45 ENSDARG00000063357 57 1 1.000 - - - - - - - - G protein-coupled receptor 45 [Source:HGNC Symbol;Acc:HGNC:4503]
29. si:dkey-11c5.14 si:dkey-11c5.14 15 1 1.000 - - - - - - - -
30. CU694374.3 CU694374.3 28 1 - - - - - - 1.000 - -
31. CABZ01016567.1 CABZ01016567.1 73 1 - - - - - - 1.000 - -
32. CR848746.2 CR848746.2 69 0.98 - - - - - - 0.980 - -
33. CU013533.1 CU013533.1 108 0.956 - 0.956 - - - - - - -
34. pparaa ENSDARG00000031777 216 0.95 - 0.950 - - - - - - - peroxisome proliferator-activated receptor alpha a [Source:ZFIN;Acc:ZDB-GENE-041210-169]
35. accs ENSDARG00000052124 294 0.949 0.949 - - - - - - - - 1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional) [Source:ZFIN;Acc:ZDB-GENE-050327-39]
36. GAS2_1 GAS2_1 16 0.948 - - 0.948 - - - - - -
37. ATP5J2 68 0.948 - - - - - - 0.948 - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F2
38. si:dkeyp-98a7.1 100 0.946 - 0.946 - - - - - - - si:dkeyp-98a7.1
39. ms4a17a.1 ENSDARG00000043798 7 0.946 - - - - - - 0.946 - - membrane-spanning 4-domains, subfamily A, member 17A.1 [Source:ZFIN;Acc:ZDB-GENE-050417-307]
40. si:ch73-289h5.3 si:ch73-289h5.3 9 0.946 - 0.946 - - - - - - -
41. si:ch1073-15f19.2 ENSDARG00000095640 4 0.946 - 0.946 - - - - - - - si:ch1073-15f19.2 [Source:ZFIN;Acc:ZDB-GENE-091204-84]
42. hecw1 hecw1 241 0.946 - 0.946 - - - - - - -
43. agrn_1 ENSDARG00000079388, ENSDARG00000110127 47 0.946 - 0.946 - - - - - - - agrin [Source:ZFIN;Acc:ZDB-GENE-030131-1033]
44. hsd17b7_1 ENSDARG00000088140 36 0.946 - 0.946 - - - - - - - hydroxysteroid (17-beta) dehydrogenase 7 [Source:ZFIN;Acc:ZDB-GENE-061013-378]
45. drd4a ENSDARG00000038363 82 0.946 - 0.946 - - - - - - - dopamine receptor D4a [Source:ZFIN;Acc:ZDB-GENE-070112-996]
46. si:dkey-181m9.8 ENSDARG00000078267 123 0.943 - 0.943 - - - - - - - si:dkey-181m9.8 [Source:ZFIN;Acc:ZDB-GENE-070912-399]
47. si:zfos-364h11.1 99 0.943 - 0.943 - - - - - - - si:zfos-364h11.1, transcript variant X4
48. PEX5L PEX5L 179 0.943 - 0.943 - - - - - - -
49. CU459084.1 CU459084.1 4 0.941 0.941 - - - - - - - -
50. GIPC3 ENSDARG00000053074 182 0.938 - 0.938 - - - - - - - GIPC PDZ domain containing family, member 3 [Source:ZFIN;Acc:ZDB-GENE-060616-326]
51. nefla ENSDARG00000057568 62 0.935 - 0.935 - - - - - - - neurofilament, light polypeptide a [Source:ZFIN;Acc:ZDB-GENE-091117-1]
52. si:dkey-111b14.2 si:dkey-111b14.2 25 0.923 0.923 - - - - - - - -
53. si:ch211-145h19.1 31 0.908 - - - - - - 0.908 - - si:ch211-145h19.1
54. C13H4orf32 C13H4orf32 174 0.902 - 0.902 - - - - - - -
55. sult1st6 ENSDARG00000006811 31 0.901 - 0.901 - - - - - - - sulfotransferase family 1, cytosolic sulfotransferase 6 [Source:ZFIN;Acc:ZDB-GENE-040718-343]
56. hunk ENSDARG00000091317 241 0.9 - - - - - - 0.900 - - hormonally up-regulated Neu-associated kinase [Source:ZFIN;Acc:ZDB-GENE-050309-240]
57. alkbh6 ENSDARG00000077253 117 0.9 0.900 - - - - - - - - alkB homolog 6 [Source:ZFIN;Acc:ZDB-GENE-060407-1]
58. sh3bp2 ENSDARG00000021982 61 0.9 - - - - - - 0.900 - - SH3-domain binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-091204-268]
59. CABZ01030094.1 CABZ01030094.1 98 0.9 - - - - - - 0.900 - -
60. fam175b fam175b 37 0.899 0.899 - - - - - - - -
61. foxq1b ENSDARG00000055395 549 0.899 - 0.899 - - - - - - - forkhead box Q1b [Source:ZFIN;Acc:ZDB-GENE-040426-2090]
62. pdp1 ENSDARG00000076308 455 0.896 0.896 - - - - - - - - pyruvate dehyrogenase phosphatase catalytic subunit 1 [Source:ZFIN;Acc:ZDB-GENE-060810-70]
63. timm44 ENSDARG00000104771 98 0.891 0.891 - - - - - - - - translocase of inner mitochondrial membrane 44 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-145]
64. htr1b ENSDARG00000053987 11 0.888 - - 0.888 - - - - - - 5-hydroxytryptamine (serotonin) receptor 1B [Source:ZFIN;Acc:ZDB-GENE-081022-141]
65. nadsyn1 ENSDARG00000101378, ENSDARG00000117533 2 0.888 - - 0.888 - - - - - - NAD synthetase 1 [Source:ZFIN;Acc:ZDB-GENE-070615-22]
66. AADAT ENSDARG00000011410 4 0.888 - - 0.888 - - - - - - aminoadipate aminotransferase [Source:ZFIN;Acc:ZDB-GENE-111229-1]
67. 5S_rRNA_1 5S_rRNA_1 5 0.888 - - 0.888 - - - - - -
68. CU302326.3 CU302326.3 6 0.888 - - 0.888 - - - - - -
69. si:dkey-192l18.9 ENSDARG00000077878 10 0.888 - - 0.888 - - - - - - si:dkey-192l18.9 [Source:ZFIN;Acc:ZDB-GENE-120709-25]
70. mybpc2a ENSDARG00000030157 11 0.888 - - 0.888 - - - - - - myosin binding protein C, fast type a [Source:ZFIN;Acc:ZDB-GENE-060901-1]
71. BX537113.1 BX537113.1 2 0.888 - - 0.888 - - - - - -
72. thsd7a thsd7a 194 0.887 - 0.887 - - - - - - -
73. si:ch211-71k14.1 ENSDARG00000087061 48 0.887 - 0.887 - - - - - - - si:ch211-71k14.1 [Source:ZFIN;Acc:ZDB-GENE-110411-283]
74. CD200_2 CD200_2 47 0.884 - - - - - - 0.884 - -
75. spata5l1 ENSDARG00000061763 127 0.884 - - - - - - 0.884 - - spermatogenesis associated 5-like 1 [Source:ZFIN;Acc:ZDB-GENE-060929-204]
76. rasl11b ENSDARG00000015611 131 0.882 - 0.882 - - - - - - - RAS-like, family 11, member B [Source:ZFIN;Acc:ZDB-GENE-040426-793]
77. mettl7a ENSDARG00000056726, ENSDARG00000060889, ENSDARG00000111162 18 0.877 - - 0.877 - - - - - - methyltransferase like 7A [Source:ZFIN;Acc:ZDB-GENE-061027-239]
78. si:dkey-105h11.2 13 0.877 - - 0.877 - - - - - - si:dkey-105h11.2
79. NINJ1 ENSDARG00000103663 43 0.877 - - 0.877 - - - - - - ninjurin 1 [Source:HGNC Symbol;Acc:HGNC:7824]
80. neu3.1 ENSDARG00000096382 9 0.876 - - 0.876 - - - - - - sialidase 3 (membrane sialidase), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-061201-39]
81. EXO5 ENSDARG00000042727, ENSDARG00000111772 282 0.876 0.876 - - - - - - - - exonuclease 5 [Source:ZFIN;Acc:ZDB-GENE-051113-108]
82. si:dkey-25o1.5 si:dkey-25o1.5 5 0.874 - - 0.874 - - - - - -
83. si:dkey-71d15.2 ENSDARG00000094753 155 0.874 - - 0.874 - - - - - - si:dkey-71d15.2 [Source:ZFIN;Acc:ZDB-GENE-050309-272]
84. satb2 ENSDARG00000061885 6 0.872 - 0.872 - - - - - - - SATB homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-070912-212]
85. BX005085.3 ENSDARG00000103450 45 0.871 - - - - - - 0.871 - -
86. si:ch211-28e16.5 ENSDARG00000093376 2 0.87 - - 0.870 - - - - - - si:ch211-28e16.5 [Source:ZFIN;Acc:ZDB-GENE-090313-111]
87. si:ch211-203k16.3 ENSDARG00000069305 21 0.865 - 0.865 - - - - - - - si:ch211-203k16.3 [Source:ZFIN;Acc:ZDB-GENE-041014-290]
88. HRASLS ENSDARG00000100021 16 0.865 - 0.865 - - - - - - - HRAS-like suppressor [Source:ZFIN;Acc:ZDB-GENE-040718-330]
89. C7H19orf12_1 C7H19orf12_1 20 0.865 - 0.865 - - - - - - -
90. TGFBR3L TGFBR3L 16 0.864 - - 0.864 - - - - - -
91. nubpl ENSDARG00000054821 232 0.862 - - - - - 0.862 - - - nucleotide binding protein-like [Source:ZFIN;Acc:ZDB-GENE-040718-140]
92. PLA2G4C_3 PLA2G4C_3 14 0.862 - - 0.862 - - - - - -
93. si:ch73-112l6.1 ENSDARG00000093126 87 0.862 - 0.862 - - - - - - - si:ch73-112l6.1 [Source:ZFIN;Acc:ZDB-GENE-091204-14]
94. sdr42e1 ENSDARG00000098838 25 0.862 - 0.862 - - - - - - - short chain dehydrogenase/reductase family 42E, member 1 [Source:ZFIN;Acc:ZDB-GENE-051120-63]
95. BX511270.1 BX511270.1 25 0.862 - 0.862 - - - - - - -
96. ADAMTS2 ENSDARG00000075930 7 0.862 0.862 - - - - - - - - ADAM metallopeptidase with thrombospondin type 1 motif, 2 [Source:ZFIN;Acc:ZDB-GENE-070816-3]
97. CU424462.2 CU424462.2 73 0.862 - 0.862 - - - - - - -
98. tmem178b ENSDARG00000006747 173 0.862 - 0.862 - - - - - - - transmembrane protein 178B [Source:ZFIN;Acc:ZDB-GENE-040718-92]
99. myhb ENSDARG00000001993 11 0.856 - - 0.856 - - - - - - myosin, heavy chain b [Source:ZFIN;Acc:ZDB-GENE-081124-1]
100. CCDC176_1 CCDC176_1 126 0.855 - 0.855 - - - - - - -

There are 536 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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