Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for twist1a

Gene Name Gene ID Reads Annotation
twist1a ENSDARG00000030402 3748 twist family bHLH transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-000210-6]










Genes with expression patterns similar to twist1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. twist1a ENSDARG00000030402 3748 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 twist family bHLH transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-000210-6]
2. arpc5b ENSDARG00000019062 2786 2.325 - 0.817 - - - 0.776 - - 0.732 actin related protein 2/3 complex, subunit 5B [Source:ZFIN;Acc:ZDB-GENE-040120-7]
3. fn1 fn1 2538 2.287 - - 0.784 - - 0.799 0.704 - -
4. rps6ka3a ENSDARG00000035556, ENSDARG00000116641 3608 2.278 - 0.744 - - - 0.771 0.763 - - ribosomal protein S6 kinase a, polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-030219-119]
5. osr1 ENSDARG00000014091 770 2.276 0.770 0.777 - - - 0.729 - - - odd-skipped related transciption factor 1 [Source:ZFIN;Acc:ZDB-GENE-070321-1]
6. tmem251 ENSDARG00000042341 1102 2.271 - 0.787 - - - - 0.776 - 0.708 transmembrane protein 251 [Source:ZFIN;Acc:ZDB-GENE-041001-121]
7. dlg3_1 ENSDARG00000076796, ENSDARG00000111101 1542 1.735 - 0.877 - - - - 0.858 - - discs, large homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050208-93]
8. itga5 ENSDARG00000006353 1876 1.715 - 0.804 - - - - 0.911 - - integrin, alpha 5 (fibronectin receptor, alpha polypeptide) [Source:ZFIN;Acc:ZDB-GENE-031116-52]
9. col14a1a ENSDARG00000005762 4778 1.706 - - 0.963 - - - - - 0.743 collagen, type XIV, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9889]
10. spata13 ENSDARG00000062837 5330 1.629 - - - - - 0.862 0.767 - - spermatogenesis associated 13 [Source:ZFIN;Acc:ZDB-GENE-091116-25]
11. pum1 ENSDARG00000099256 5017 1.606 - 0.884 - - - - 0.722 - - pumilio RNA-binding family member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2074]
12. etv4 ENSDARG00000018303, ENSDARG00000115855 3889 1.602 - - 0.772 - - - - - 0.830 ets variant 4 [Source:ZFIN;Acc:ZDB-GENE-990415-71]
13. derl2 ENSDARG00000042401 863 1.591 - 0.801 - - - 0.790 - - - derlin 2 [Source:ZFIN;Acc:ZDB-GENE-050522-90]
14. nrf1 ENSDARG00000000018 4683 1.587 - 0.830 - - - - - - 0.757 nuclear respiratory factor 1 [Source:ZFIN;Acc:ZDB-GENE-001221-1]
15. tmem176l.1 ENSDARG00000099491 860 1.58 - - - - - 0.757 - 0.823 - transmembrane protein 176l.1 [Source:ZFIN;Acc:ZDB-GENE-080829-11]
16. b3gnt2b ENSDARG00000091902 4125 1.58 - - 0.769 - - 0.811 - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2b [Source:ZFIN;Acc:ZDB-GENE-050913-158]
17. zgc:153952 739 1.579 - 0.782 0.797 - - - - - - zgc:153952, transcript variant X1
18. CU929394.1 CU929394.1 405 1.564 - - 0.801 - - - 0.763 - -
19. trpm7 ENSDARG00000036232 925 1.563 - 0.772 0.791 - - - - - - transient receptor potential cation channel, subfamily M, member 7 [Source:ZFIN;Acc:ZDB-GENE-021115-2]
20. elmod2 ENSDARG00000101669 3101 1.56 - 0.844 - - - - 0.716 - - ELMO/CED-12 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060824-2]
21. cables1 ENSDARG00000099395 361 1.552 - - 0.811 0.741 - - - - - Cdk5 and Abl enzyme substrate 1 [Source:ZFIN;Acc:ZDB-GENE-070912-509]
22. lcat ENSDARG00000099424 357 1.543 - 0.765 - - - 0.778 - - - lecithin-cholesterol acyltransferase [Source:ZFIN;Acc:ZDB-GENE-010716-3]
23. pcdh8 ENSDARG00000006467 317 1.534 - - 0.821 0.713 - - - - - protocadherin 8 [Source:ZFIN;Acc:ZDB-GENE-980526-242]
24. bnipl ENSDARG00000060435 1382 1.532 - - 0.724 - - 0.808 - - - BCL2 interacting protein like [Source:ZFIN;Acc:ZDB-GENE-060503-81]
25. antxr1c ENSDARG00000063612 3203 1.529 - - 0.813 - - - 0.716 - - ANTXR cell adhesion molecule 1c [Source:ZFIN;Acc:ZDB-GENE-090514-5]
26. col12a1a ENSDARG00000078322 1833 1.522 - 0.728 - - - - 0.794 - - collagen, type XII, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090728-1]
27. gmfb ENSDARG00000028327 6522 1.522 - - - - - 0.771 - 0.751 - glia maturation factor, beta [Source:ZFIN;Acc:ZDB-GENE-040426-2114]
28. tnfrsf19 ENSDARG00000041869 796 1.518 - - - - - 0.816 - 0.702 - tumor necrosis factor receptor superfamily, member 19 [Source:ZFIN;Acc:ZDB-GENE-030131-6760]
29. CTSA ENSDARG00000098114 1154 1.516 - - - - - 0.808 0.708 - - cathepsin A [Source:ZFIN;Acc:ZDB-GENE-030131-537]
30. pho ENSDARG00000035133 670 1.515 - - 0.790 - - - 0.725 - - phoenix [Source:ZFIN;Acc:ZDB-GENE-030131-5935]
31. rock2a ENSDARG00000017500 1277 1.51 - 0.724 - - - - 0.786 - - rho-associated, coiled-coil containing protein kinase 2a [Source:ZFIN;Acc:ZDB-GENE-030115-3]
32. usp10 ENSDARG00000103422 4247 1.508 - 0.803 - - - 0.705 - - - ubiquitin specific peptidase 10 [Source:ZFIN;Acc:ZDB-GENE-030219-132]
33. foxd5 ENSDARG00000042485, ENSDARG00000109712 216 1.506 - - 0.805 0.701 - - - - - forkhead box D5 [Source:ZFIN;Acc:ZDB-GENE-980605-4]
34. pgrmc2 ENSDARG00000030237, ENSDARG00000110406 791 1.498 - - - - - 0.793 0.705 - - progesterone receptor membrane component 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2102]
35. PPP1R8 PPP1R8 1897 1.495 - 0.781 0.714 - - - - - -
36. inhbb ENSDARG00000040777 2141 1.494 - - 0.729 - 0.765 - - - - inhibin subunit beta B [Source:ZFIN;Acc:ZDB-GENE-990415-2]
37. golph3 ENSDARG00000052851, ENSDARG00000109334 2114 1.493 - - 0.768 - - 0.725 - - - golgi phosphoprotein 3 [Source:ZFIN;Acc:ZDB-GENE-041010-209]
38. ugdh ENSDARG00000019838, ENSDARG00000110018 1330 1.493 0.749 - - - - 0.744 - - - UDP-glucose 6-dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-011022-1]
39. tpst1 ENSDARG00000073872 2490 1.492 0.705 - - - - 0.787 - - - tyrosylprotein sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-000210-10]
40. arhgef1b ENSDARG00000055837 2330 1.491 - - - - - 0.778 0.713 - - Rho guanine nucleotide exchange factor (GEF) 1b [Source:ZFIN;Acc:ZDB-GENE-060616-136]
41. CABZ01034082.1 ENSDARG00000099583 2237 1.489 - - - - - 0.757 0.732 - -
42. wls ENSDARG00000009534 8719 1.489 - - - - - 0.710 0.779 - - wntless Wnt ligand secretion mediator [Source:ZFIN;Acc:ZDB-GENE-040426-2161]
43. FAT2 ENSDARG00000018923 1088 1.487 - 0.700 - - - 0.787 - - - FAT atypical cadherin 2 [Source:ZFIN;Acc:ZDB-GENE-111031-1]
44. foxj1a ENSDARG00000101919 1095 1.482 - - 0.761 0.721 - - - - - forkhead box J1a [Source:ZFIN;Acc:ZDB-GENE-060929-1178]
45. si:ch211-202h22.8 ENSDARG00000078138 670 1.481 - - 0.730 - - - 0.751 - - si:ch211-202h22.8 [Source:ZFIN;Acc:ZDB-GENE-090313-78]
46. cyp2k16 ENSDARG00000102981 560 1.479 - - 0.773 - - - - - 0.706 cytochrome P450, family 2, subfamily K, polypeptide16 [Source:ZFIN;Acc:ZDB-GENE-041010-37]
47. arpp19a ENSDARG00000032532, ENSDARG00000109679 5102 1.477 - 0.749 - - - - - - 0.728 cAMP-regulated phosphoprotein 19a [Source:ZFIN;Acc:ZDB-GENE-040426-1281]
48. pgrmc1 ENSDARG00000054172 5423 1.476 - - - - - 0.736 0.740 - - progesterone receptor membrane component 1 [Source:ZFIN;Acc:ZDB-GENE-041114-91]
49. BX005001.1 BX005001.1 741 1.474 - - - 0.741 - - 0.733 - -
50. tuba8l3 ENSDARG00000070155 7525 1.47 - - - - - - - 0.701 0.769 tubulin, alpha 8 like 3 [Source:ZFIN;Acc:ZDB-GENE-040801-77]
51. otud5b ENSDARG00000056840, ENSDARG00000114052 2199 1.46 - - 0.721 - - 0.739 - - - OTU deubiquitinase 5b [Source:ZFIN;Acc:ZDB-GENE-040801-50]
52. stard13b ENSDARG00000098954 700 1.46 - 0.721 - - - 0.739 - - - StAR-related lipid transfer (START) domain containing 13b [Source:ZFIN;Acc:ZDB-GENE-050506-146]
53. emilin1b ENSDARG00000026166 1530 1.459 - - - - - 0.729 0.730 - - elastin microfibril interfacer 1b [Source:ZFIN;Acc:ZDB-GENE-060818-36]
54. parp16 ENSDARG00000018593 873 1.455 - - 0.754 - - - - 0.701 - poly (ADP-ribose) polymerase family, member 16 [Source:ZFIN;Acc:ZDB-GENE-040426-2289]
55. acaa2 ENSDARG00000038881 2649 1.455 0.730 - - - - 0.725 - - - acetyl-CoA acyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1996]
56. CU694219.1 CU694219.1 699 1.45 - - - - - 0.705 0.745 - -
57. palm1b ENSDARG00000007818 2128 1.449 - 0.714 - - - - 0.735 - - paralemmin 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1147]
58. zdhhc4 ENSDARG00000045159, ENSDARG00000117124 625 1.445 - 0.732 - - - - - - 0.713 zinc finger, DHHC-type containing 4 [Source:ZFIN;Acc:ZDB-GENE-030131-9031]
59. sp5l ENSDARG00000115868 361 1.445 - - - 0.727 0.718 - - - - Sp5 transcription factor-like [Source:ZFIN;Acc:ZDB-GENE-030131-2981]
60. lrrc17 ENSDARG00000037960 1585 1.441 - - 0.715 0.726 - - - - - leucine rich repeat containing 17 [Source:ZFIN;Acc:ZDB-GENE-030131-9774]
61. atf5b ENSDARG00000077785 416 1.44 - 0.700 - - - - 0.740 - - activating transcription factor 5b [Source:ZFIN;Acc:ZDB-GENE-030131-2637]
62. met ENSDARG00000070903 2088 1.439 - - - - - 0.733 - - 0.706 MET proto-oncogene, receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-041014-1]
63. TNRC6B ENSDARG00000074161 2464 1.439 - 0.729 0.710 - - - - - - trinucleotide repeat containing 6b [Source:ZFIN;Acc:ZDB-GENE-030131-13]
64. clcn7 ENSDARG00000019556 1410 1.436 - 0.730 - - - 0.706 - - - chloride channel 7 [Source:ZFIN;Acc:ZDB-GENE-061103-196]
65. brdt ENSDARG00000102802 1067 1.436 - 0.730 - 0.706 - - - - - bromodomain, testis-specific [Source:ZFIN;Acc:ZDB-GENE-030131-5928]
66. MICAL2 MICAL2 396 1.432 - - - - - 0.721 - - 0.711
67. BCL2L12 BCL2L12 327 1.422 - - - - - 0.719 0.703 - -
68. GRAMD1C ENSDARG00000076238 795 1.408 - - - - - 0.706 0.702 - - GRAM domain containing 1c [Source:ZFIN;Acc:ZDB-GENE-050506-88]
69. sp3a ENSDARG00000001549 1994 1.405 - - 0.705 - - 0.700 - - - sp3a transcription factor [Source:ZFIN;Acc:ZDB-GENE-070410-111]
70. dpm3 ENSDARG00000058650 4386 0.928 - - 0.928 - - - - - - dolichyl-phosphate mannosyltransferase polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1782]
71. uap1 ENSDARG00000052170 1168 0.907 - 0.907 - - - - - - - UDP-N-acetylglucosamine pyrophosphorylase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1233]
72. smg7 ENSDARG00000060767 2759 0.903 - - 0.903 - - - - - - SMG7 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-030131-9122]
73. amot ENSDARG00000078335 1757 0.898 - - - - - - 0.898 - - angiomotin [Source:ZFIN;Acc:ZDB-GENE-030131-7487]
74. RANBP3 RANBP3 2513 0.891 - 0.891 - - - - - - -
75. itgb3a ENSDARG00000056767, ENSDARG00000115691 2556 0.889 - - - - - - - - 0.889 integrin beta 3a [Source:ZFIN;Acc:ZDB-GENE-071207-1]
76. NID1 NID1 6192 0.879 - - - - 0.879 - - - -
77. brms1 ENSDARG00000051955 900 0.876 - 0.876 - - - - - - - BRMS1, transcriptional repressor and anoikis regulator [Source:ZFIN;Acc:ZDB-GENE-030616-596]
78. rasgef1ba ENSDARG00000033614, ENSDARG00000116057 4860 0.87 - - - - - - - - 0.870 RasGEF domain family, member 1Ba [Source:ZFIN;Acc:ZDB-GENE-030131-5783]
79. plxna3 ENSDARG00000007172 1412 0.87 0.870 - - - - - - - - plexin A3 [Source:ZFIN;Acc:ZDB-GENE-070613-1]
80. lipin2 2021 0.87 - 0.870 - - - - - - - lipin 2, transcript variant X2
81. cetn4 ENSDARG00000041215 898 0.869 - - - - - - 0.869 - - centrin 4 [Source:ZFIN;Acc:ZDB-GENE-030826-21]
82. si:dkeyp-44a8.2 ENSDARG00000092493 8308 0.866 - - 0.866 - - - - - - si:dkeyp-44a8.2 [Source:ZFIN;Acc:ZDB-GENE-070705-542]
83. trappc12 ENSDARG00000060101 809 0.865 - 0.865 - - - - - - - trafficking protein particle complex 12 [Source:ZFIN;Acc:ZDB-GENE-070112-1282]
84. cpne1 ENSDARG00000075536 4063 0.855 - - - - - - 0.855 - - copine I [Source:ZFIN;Acc:ZDB-GENE-030131-3562]
85. wbp11 ENSDARG00000099151, ENSDARG00000101411 567 0.855 - - - - - - - - 0.855 WW domain binding protein 11 [Source:ZFIN;Acc:ZDB-GENE-040426-1829]
86. lrwd1 ENSDARG00000035147 464 0.852 - - - - - - 0.852 - - leucine-rich repeats and WD repeat domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5335]
87. lin7c ENSDARG00000027322 3083 0.846 - 0.846 - - - - - - - lin-7 homolog C (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-041011-2]
88. apmap ENSDARG00000017422 2692 0.846 - - - 0.846 - - - - - adipocyte plasma membrane associated protein [Source:ZFIN;Acc:ZDB-GENE-020919-1]
89. cald1l cald1l 4115 0.843 - - - - - - - - 0.843
90. ostc ENSDARG00000104901 16240 0.843 - - - - - - - - 0.843 oligosaccharyltransferase complex subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1079]
91. smad2 ENSDARG00000006389 646 0.842 - 0.842 - - - - - - - SMAD family member 2 [Source:ZFIN;Acc:ZDB-GENE-990603-7]
92. pnp5a ENSDARG00000078619 1461 0.842 - - - 0.842 - - - - - purine nucleoside phosphorylase 5a [Source:ZFIN;Acc:ZDB-GENE-040426-2553]
93. CR855996.2 ENSDARG00000104450 310 0.841 - - - - - 0.841 - - - ATPase phospholipid transporting 8B5b [Source:NCBI gene;Acc:563450]
94. larsb ENSDARG00000019280 3924 0.839 - - - - - - - - 0.839 leucyl-tRNA synthetase b [Source:ZFIN;Acc:ZDB-GENE-030114-7]
95. RBM47 ENSDARG00000061985 2498 0.839 - - - - - - 0.839 - - RNA binding motif protein 47 [Source:ZFIN;Acc:ZDB-GENE-030131-9612]
96. cables2a ENSDARG00000076964 1330 0.837 - 0.837 - - - - - - - Cdk5 and Abl enzyme substrate 2a [Source:ZFIN;Acc:ZDB-GENE-091118-58]
97. col6a1 ENSDARG00000074908 2339 0.836 - - - - - 0.836 - - - collagen, type VI, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-070501-6]
98. XPR1 XPR1 3354 0.834 - - - - - 0.834 - - -
99. snx5 ENSDARG00000020442 2463 0.833 - - - - - 0.833 - - - sorting nexin 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2857]
100. slc26a5 ENSDARG00000022424 976 0.833 - - - - - 0.833 - - - solute carrier family 26 (anion exchanger), member 5 [Source:ZFIN;Acc:ZDB-GENE-030131-1566]

There are 1074 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA