Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for tubgcp3

Gene Name Gene ID Reads Annotation
tubgcp3 ENSDARG00000029133, ENSDARG00000116225 525 tubulin, gamma complex associated protein 3 [Source:ZFIN;Acc:ZDB-GENE-030616-538]










Genes with expression patterns similar to tubgcp3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tubgcp3 ENSDARG00000029133, ENSDARG00000116225 525 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 tubulin, gamma complex associated protein 3 [Source:ZFIN;Acc:ZDB-GENE-030616-538]
2. exosc8 ENSDARG00000068755 951 1.594 - - - - - - 0.783 0.811 - exosome component 8 [Source:ZFIN;Acc:ZDB-GENE-030131-1736]
3. rnf44 ENSDARG00000068582 1612 1.585 - 0.834 0.751 - - - - - - ring finger protein 44 [Source:ZFIN;Acc:ZDB-GENE-060929-604]
4. upf1 ENSDARG00000016302 1003 1.571 - 0.804 - - - - 0.767 - - upf1 regulator of nonsense transcripts homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-2836]
5. pigm ENSDARG00000024277 86 1.56 - - - - - 0.740 0.820 - - phosphatidylinositol glycan anchor biosynthesis, class M [Source:ZFIN;Acc:ZDB-GENE-040426-1393]
6. ehmt2 ENSDARG00000102325 984 1.546 - - - - - - 0.845 0.701 - euchromatic histone-lysine N-methyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-010501-6]
7. phf20b ENSDARG00000038737, ENSDARG00000111662, ENSDARG00000116554 1385 1.526 - 0.719 - - - - 0.807 - - PHD finger protein 20, b [Source:ZFIN;Acc:ZDB-GENE-040822-33]
8. swap70b ENSDARG00000057286, ENSDARG00000109359, ENSDARG00000110820 292 1.521 - 0.722 - - - - 0.799 - - switching B cell complex subunit SWAP70b [Source:ZFIN;Acc:ZDB-GENE-030131-3587]
9. SACM1L SACM1L 416 1.519 0.752 0.767 - - - - - - -
10. ppp1r37 ENSDARG00000078458 49 1.519 0.730 - - - - 0.789 - - - protein phosphatase 1, regulatory subunit 37 [Source:ZFIN;Acc:ZDB-GENE-050208-7]
11. swt1 ENSDARG00000094010 472 1.513 - - - - - 0.758 0.755 - - SWT1 RNA endoribonuclease homolog [Source:ZFIN;Acc:ZDB-GENE-041015-373]
12. arhgap24 ENSDARG00000100973 1105 1.5 - 0.750 - - - - 0.750 - - Rho GTPase activating protein 24 [Source:ZFIN;Acc:ZDB-GENE-091118-20]
13. dapp1 ENSDARG00000039535 23 1.494 - - - - - 0.789 0.705 - - dual adaptor of phosphotyrosine and 3-phosphoinositides [Source:ZFIN;Acc:ZDB-GENE-050417-180]
14. ECEL1 ENSDARG00000060549 62 1.49 0.723 - - - - - 0.767 - - endothelin converting enzyme-like 1 [Source:ZFIN;Acc:ZDB-GENE-130530-692]
15. OSBPL3 OSBPL3 145 1.479 - - - - - 0.759 0.720 - -
16. zyx ENSDARG00000075733 429 1.458 - 0.708 - - - - 0.750 - - zyxin [Source:ZFIN;Acc:ZDB-GENE-070928-18]
17. MTA1 ENSDARG00000007198 731 1.449 - - - - - - - 0.704 0.745 metastasis associated 1 [Source:ZFIN;Acc:ZDB-GENE-131121-353]
18. zgc:174888 ENSDARG00000077176, ENSDARG00000114997 166 1.448 - - - - - 0.717 0.731 - - zgc:174888 [Source:ZFIN;Acc:ZDB-GENE-030328-33]
19. wdr73 ENSDARG00000023152, ENSDARG00000111497 217 1.428 - - - - - - 0.700 0.728 - WD repeat domain 73 [Source:ZFIN;Acc:ZDB-GENE-050417-126]
20. inpp4aa ENSDARG00000063352 1297 1.422 - - - - - - 0.700 0.722 - inositol polyphosphate-4-phosphatase type I Aa [Source:ZFIN;Acc:ZDB-GENE-060312-5]
21. mtmr2 ENSDARG00000004616 1052 1.42 - 0.718 - - - - - 0.702 - myotubularin related protein 2 [Source:ZFIN;Acc:ZDB-GENE-990715-14]
22. COQ5 ENSDARG00000035618 556 0.942 - - - - - 0.942 - - - coenzyme Q5, methyltransferase [Source:ZFIN;Acc:ZDB-GENE-040912-5]
23. gtpbp2 272 0.911 - - - - - 0.911 - - - GTP binding protein 2
24. fbxl20 ENSDARG00000075567 138 0.899 - - - - - 0.899 - - - F-box and leucine-rich repeat protein 20 [Source:ZFIN;Acc:ZDB-GENE-081031-27]
25. thrb ENSDARG00000021163 262 0.899 - - - - - 0.899 - - - thyroid hormone receptor beta [Source:ZFIN;Acc:ZDB-GENE-990415-268]
26. pvrl4 155 0.894 - - - - - 0.894 - - - poliovirus receptor-related 4
27. zgc:110626 ENSDARG00000053159 1124 0.89 - 0.890 - - - - - - - zgc:110626 [Source:ZFIN;Acc:ZDB-GENE-050417-447]
28. tmem88b ENSDARG00000069388 501 0.89 - 0.890 - - - - - - - transmembrane protein 88 b [Source:ZFIN;Acc:ZDB-GENE-060929-644]
29. plekha7a ENSDARG00000060813 179 0.877 - - - - - 0.877 - - - pleckstrin homology domain containing, family A member 7a [Source:ZFIN;Acc:ZDB-GENE-050419-75]
30. rbm24b ENSDARG00000031809, ENSDARG00000110167 2404 0.876 - - - - - 0.876 - - - RNA binding motif protein 24b [Source:ZFIN;Acc:ZDB-GENE-060312-43]
31. ndel1a ENSDARG00000010953 292 0.874 - - - - - 0.874 - - - nudE neurodevelopment protein 1-like 1a [Source:ZFIN;Acc:ZDB-GENE-040115-2]
32. narg2 narg2 97 0.871 - - - - - 0.871 - - -
33. slc16a6b ENSDARG00000060246 451 0.868 - - - - - 0.868 - - - solute carrier family 16, member 6b [Source:ZFIN;Acc:ZDB-GENE-110208-3]
34. atxn10 ENSDARG00000008439 156 0.866 - - - - - - 0.866 - - ataxin 10 [Source:ZFIN;Acc:ZDB-GENE-060503-180]
35. zgc:163143 ENSDARG00000076437 166 0.865 - - - - - 0.865 - - - zgc:163143 [Source:ZFIN;Acc:ZDB-GENE-070410-143]
36. CU929408.1 CU929408.1 714 0.864 - - - - - 0.864 - - -
37. nsun4 ENSDARG00000021324 482 0.864 0.864 - - - - - - - - NOL1/NOP2/Sun domain family, member 4 [Source:ZFIN;Acc:ZDB-GENE-041212-77]
38. frs2b ENSDARG00000037353 544 0.861 - - - - - - 0.861 - - fibroblast growth factor receptor substrate 2b [Source:ZFIN;Acc:ZDB-GENE-040718-406]
39. asb2b ENSDARG00000102490 311 0.86 - - - - - 0.860 - - - ankyrin repeat and SOCS box containing 2b [Source:ZFIN;Acc:ZDB-GENE-040426-20]
40. napepld ENSDARG00000009252 228 0.858 - - - - - - 0.858 - - N-acyl phosphatidylethanolamine phospholipase D [Source:ZFIN;Acc:ZDB-GENE-030131-3856]
41. prom1a ENSDARG00000039966 227 0.858 - - - - - 0.858 - - - prominin 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1577]
42. si:dkey-176f19.6 si:dkey-176f19.6 373 0.858 - - - - - 0.858 - - -
43. CABZ01088061.1 CABZ01088061.1 695 0.857 - - - - - 0.857 - - -
44. cbx8a ENSDARG00000087327 361 0.855 - - - - - - 0.855 - - chromobox homolog 8a (Pc class homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040405-1]
45. exd3 ENSDARG00000063140 119 0.855 - - - - - 0.855 - - - exonuclease 3'-5' domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-091204-349]
46. si:ch211-229n2.7 ENSDARG00000094088 410 0.852 - 0.852 - - - - - - - si:ch211-229n2.7 [Source:ZFIN;Acc:ZDB-GENE-030131-8579]
47. FP017294.1 FP017294.1 77 0.852 - - - - - 0.852 - - -
48. TAF4 TAF4 658 0.851 - - - - - - 0.851 - -
49. pth1a ENSDARG00000093738 106 0.85 - - - - - 0.850 - - - parathyroid hormone 1a [Source:ZFIN;Acc:ZDB-GENE-040623-1]
50. tmem151b tmem151b 442 0.85 - - - - - 0.850 - - -
51. SMIM13 ENSDARG00000089204, ENSDARG00000113880 457 0.848 - - - - - 0.848 - - - small integral membrane protein 13 [Source:ZFIN;Acc:ZDB-GENE-141212-279]
52. CABZ01080370.1 CABZ01080370.1 58 0.848 - - - - - 0.848 - - -
53. VDAC3 ENSDARG00000003695 34 0.848 - - - - - 0.848 - - - voltage-dependent anion channel 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2380]
54. nptx2a ENSDARG00000037794 127 0.846 - - - - - 0.846 - - - neuronal pentraxin 2a [Source:ZFIN;Acc:ZDB-GENE-060707-1]
55. capn7 ENSDARG00000102987 386 0.846 - - - - - 0.846 - - - calpain 7 [Source:ZFIN;Acc:ZDB-GENE-111111-1]
56. med22 ENSDARG00000014148 1307 0.846 - 0.846 - - - - - - - mediator complex subunit 22 [Source:ZFIN;Acc:ZDB-GENE-040625-156]
57. mettl1 ENSDARG00000076518 366 0.843 - - - - - 0.843 - - - methyltransferase like 1 [Source:ZFIN;Acc:ZDB-GENE-041010-24]
58. iqcb1 ENSDARG00000101032 310 0.841 - - - - - 0.841 - - - IQ motif containing B1 [Source:ZFIN;Acc:ZDB-GENE-041212-47]
59. si:ch211-113e8.11 ENSDARG00000076585 721 0.84 - - - - - - 0.840 - - si:ch211-113e8.11 [Source:ZFIN;Acc:ZDB-GENE-090313-12]
60. ptpn4b ENSDARG00000000183 425 0.84 - - - - - 0.840 - - - protein tyrosine phosphatase, non-receptor type 4b [Source:ZFIN;Acc:ZDB-GENE-030131-6259]
61. si:dkey-254e13.6 ENSDARG00000088301 191 0.839 - - - - - 0.839 - - - si:dkey-254e13.6 [Source:ZFIN;Acc:ZDB-GENE-070705-420]
62. si:ch73-186j5.4 si:ch73-186j5.4 70 0.839 - - - - - - 0.839 - -
63. slc25a38b ENSDARG00000074533 354 0.838 - - - - - 0.838 - - - solute carrier family 25, member 38b [Source:ZFIN;Acc:ZDB-GENE-110214-1]
64. pvalb7 ENSDARG00000034705, ENSDARG00000109277 221 0.838 - - - - - 0.838 - - - parvalbumin 7 [Source:ZFIN;Acc:ZDB-GENE-040718-285]
65. MXRA5 MXRA5 58 0.838 - - - - - 0.838 - - -
66. ano1 ENSDARG00000102335 445 0.838 - - - - - 0.838 - - - anoctamin 1, calcium activated chloride channel [Source:ZFIN;Acc:ZDB-GENE-121127-3]
67. CR854923.1 CR854923.1 18 0.837 - - - - - 0.837 - - -
68. CR848032.1 ENSDARG00000102710 338 0.836 - - - - - - 0.836 - -
69. BX927064.1 BX927064.1 46 0.836 - - - - - 0.836 - - -
70. DDHD1 DDHD1 250 0.836 - - - - - 0.836 - - -
71. ints7 ENSDARG00000019300 273 0.835 - - - - - 0.835 - - - integrator complex subunit 7 [Source:ZFIN;Acc:ZDB-GENE-021220-6]
72. si:dkey-25e12.3 ENSDARG00000055365, ENSDARG00000113269 87 0.835 - - - - - 0.835 - - - si:dkey-25e12.3 [Source:ZFIN;Acc:ZDB-GENE-041001-132]
73. alkbh4 ENSDARG00000052247 306 0.834 - - - - - - 0.834 - - alkB homolog 4, lysine demthylase [Source:ZFIN;Acc:ZDB-GENE-060526-275]
74. si:dkey-7l6.3 ENSDARG00000094514 146 0.834 - 0.834 - - - - - - - si:dkey-7l6.3 [Source:ZFIN;Acc:ZDB-GENE-070912-586]
75. ddx55 ENSDARG00000009864 415 0.833 - - - - - 0.833 - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 [Source:ZFIN;Acc:ZDB-GENE-021212-1]
76. rgs3a ENSDARG00000099746 727 0.833 - - - - - - 0.833 - - regulator of G protein signaling 3a [Source:ZFIN;Acc:ZDB-GENE-040801-150]
77. stx16 ENSDARG00000003307, ENSDARG00000112974 487 0.832 - - - - - 0.832 - - - syntaxin 16 [Source:ZFIN;Acc:ZDB-GENE-060810-113]
78. timm50 ENSDARG00000031098, ENSDARG00000109900 988 0.831 - - - - - - 0.831 - - translocase of inner mitochondrial membrane 50 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1618]
79. rars2 ENSDARG00000032277 54 0.83 - - - - - 0.830 - - - arginyl-tRNA synthetase 2, mitochondrial (putative) [Source:ZFIN;Acc:ZDB-GENE-040426-1244]
80. ankrd10b ENSDARG00000004771 654 0.829 - 0.829 - - - - - - - ankyrin repeat domain 10b [Source:ZFIN;Acc:ZDB-GENE-061013-49]
81. tmeff2b ENSDARG00000058699 82 0.829 - - - - - 0.829 - - - transmembrane protein with EGF-like and two follistatin-like domains 2b [Source:ZFIN;Acc:ZDB-GENE-101001-4]
82. tada2a ENSDARG00000031562, ENSDARG00000115183 610 0.829 - - - - - 0.829 - - - transcriptional adaptor 2A [Source:ZFIN;Acc:ZDB-GENE-060929-508]
83. kdm5bb ENSDARG00000003098 531 0.828 - - - - - - 0.828 - - lysine (K)-specific demethylase 5Bb [Source:ZFIN;Acc:ZDB-GENE-030424-1]
84. rfc1 ENSDARG00000054799 1416 0.828 - - - - - - 0.828 - - replication factor C (activator 1) 1 [Source:ZFIN;Acc:ZDB-GENE-070410-99]
85. agmo ENSDARG00000025595 42 0.827 - - - - - - 0.827 - - alkylglycerol monooxygenase [Source:ZFIN;Acc:ZDB-GENE-040426-2207]
86. fbxo7 ENSDARG00000099833 304 0.827 - - - - - - 0.827 - - F-box protein 7 [Source:ZFIN;Acc:ZDB-GENE-050913-68]
87. itga3a ENSDARG00000037917 219 0.827 - - - - - - 0.827 - - integrin, alpha 3a [Source:ZFIN;Acc:ZDB-GENE-090805-3]
88. si:dkey-283b1.7 ENSDARG00000053460 10 0.827 - - - - - 0.827 - - - si:dkey-283b1.7 [Source:ZFIN;Acc:ZDB-GENE-120215-126]
89. hsbp1a ENSDARG00000069425 1086 0.825 - - - - - - - 0.825 - heat shock factor binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050320-136]
90. kcnc1a ENSDARG00000051852 317 0.825 - - - - - 0.825 - - - potassium voltage-gated channel, Shaw-related subfamily, member 1a [Source:ZFIN;Acc:ZDB-GENE-061220-10]
91. RPS11 ENSDARG00000053058 32 0.825 - - - - - 0.825 - - - ribosomal protein S11 [Source:ZFIN;Acc:ZDB-GENE-040426-2701]
92. map9 ENSDARG00000037276, ENSDARG00000115648 581 0.824 - - - - - - 0.824 - - microtubule-associated protein 9 [Source:ZFIN;Acc:ZDB-GENE-080225-36]
93. slc27a2b 72 0.823 - - - - - - 0.823 - - solute carrier family 27 (fatty acid transporter), member 2b
94. SIPA1 SIPA1 302 0.823 - - - - - 0.823 - - -
95. RHOBTB1 ENSDARG00000079468 189 0.821 - - - - - 0.821 - - - Rho related BTB domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-130530-871]
96. kif5bb 1645 0.821 - - - - - - 0.821 - - kinesin family member 5B, b
97. KDELR3 ENSDARG00000040912 109 0.821 - 0.821 - - - - - - - KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1387]
98. chgb ENSDARG00000076500 42 0.821 - - - - - 0.821 - - - chromogranin B [Source:ZFIN;Acc:ZDB-GENE-070705-268]
99. katna1 ENSDARG00000021827 221 0.821 - - - - - - 0.821 - - katanin p60 (ATPase containing) subunit A 1 [Source:ZFIN;Acc:ZDB-GENE-050522-514]
100. wash wash 172 0.821 - - - - - - 0.821 - -

There are 719 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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