Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for tube1

Gene Name Gene ID Reads Annotation
tube1 ENSDARG00000043982, ENSDARG00000096620 96 tubulin, epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1174]










Genes with expression patterns similar to tube1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tube1 ENSDARG00000043982, ENSDARG00000096620 96 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 tubulin, epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1174]
2. CABZ01081748.1 ENSDARG00000102139 31 2.352 - 0.759 - - - 0.875 - 0.718 - gastrula zinc finger protein XlCGF8.2DB-like [Source:NCBI gene;Acc:100007471]
3. zgc:110782 ENSDARG00000044544 48 1.852 - - - - - 0.875 0.977 - - zgc:110782 [Source:ZFIN;Acc:ZDB-GENE-050320-51]
4. mtf2 ENSDARG00000005590 82 1.777 - 0.969 - - - 0.808 - - - metal response element binding transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-060512-94]
5. si:ch211-76l23.4 ENSDARG00000096242 202 1.761 - 0.784 - - - - 0.977 - - si:ch211-76l23.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8310]
6. MCOLN2 ENSDARG00000098918 12 1.759 0.884 - - - - 0.875 - - - mucolipin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-692]
7. tdrd9 ENSDARG00000013453 22 1.724 - 0.872 - - - 0.852 - - - tudor domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-090313-193]
8. MRAS ENSDARG00000075285 260 1.681 - - 0.713 - - - 0.968 - - muscle RAS oncogene homolog [Source:HGNC Symbol;Acc:HGNC:7227]
9. CABZ01083834.1 CABZ01083834.1 38 1.652 - 0.784 - - - - 0.868 - -
10. MPP3 MPP3 13 1.641 0.766 - - - - 0.875 - - -
11. ARSI ARSI 34 1.631 - - - - - 0.761 0.870 - -
12. eps15 ENSDARG00000078216 246 1.63 0.726 - - - - - 0.904 - - epidermal growth factor receptor pathway substrate 15 [Source:ZFIN;Acc:ZDB-GENE-081104-264]
13. si:ch211-260m19.8 si:ch211-260m19.8 33 1.616 - 0.741 - - - 0.875 - - -
14. otx1a 1607 1.611 - - - - - 0.875 - 0.736 - orthodenticle homeobox 1a
15. si:dkey-15h8.1 si:dkey-15h8.1 17 1.593 - - 0.718 - - 0.875 - - -
16. mtnr1aa ENSDARG00000037545, ENSDARG00000114868 40 1.589 0.803 - - - - 0.786 - - - melatonin receptor 1A a [Source:ZFIN;Acc:ZDB-GENE-990415-155]
17. MAPK8IP1 MAPK8IP1 121 1.533 0.803 - - - - - 0.730 - -
18. smtla ENSDARG00000038191 42 1.511 - 0.733 - - - 0.778 - - - somatolactin alpha [Source:ZFIN;Acc:ZDB-GENE-060123-2]
19. EGR4 ENSDARG00000077799 34 1.5 0.716 0.784 - - - - - - - early growth response 4 [Source:ZFIN;Acc:ZDB-GENE-080204-90]
20. SNAPC2 ENSDARG00000036473 158 1.5 0.716 0.784 - - - - - - - small nuclear RNA activating complex, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-120328-2]
21. arhgef9a ENSDARG00000061746 58 1 1.000 - - - - - - - - Cdc42 guanine nucleotide exchange factor (GEF) 9a [Source:ZFIN;Acc:ZDB-GENE-070705-271]
22. SNORD94 SNORD94 57 1 1.000 - - - - - - - -
23. si:dkey-78a14.5 14 0.988 - - - - - 0.988 - - - si:dkey-78a14.5, transcript variant X2
24. rhbdl1 ENSDARG00000087040 23 0.98 - - - - - - 0.980 - - rhomboid, veinlet-like 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-120529-2]
25. chmp2ba ENSDARG00000068683, ENSDARG00000113182, ENSDARG00000114167 20 0.977 - - - - - - 0.977 - - charged multivesicular body protein 2Ba [Source:ZFIN;Acc:ZDB-GENE-070628-3]
26. upk3l upk3l 61 0.977 - - - - - - 0.977 - -
27. zgc:174224_1 ENSDARG00000093875 7 0.977 - - - - - - 0.977 - - zgc:174224 [Source:ZFIN;Acc:ZDB-GENE-071004-118]
28. LIX1 ENSDARG00000052154 9 0.977 - - - - - - 0.977 - - limb and CNS expressed 1 [Source:ZFIN;Acc:ZDB-GENE-060526-123]
29. apnl ENSDARG00000090900 21 0.977 - - - - - - 0.977 - - actinoporin-like protein [Source:ZFIN;Acc:ZDB-GENE-030131-8907]
30. AL844186.1 ENSDARG00000114351 41 0.977 - - - - - - 0.977 - -
31. si:dkey-153n9.5 si:dkey-153n9.5 20 0.977 - - - - - - 0.977 - -
32. GOLT1A ENSDARG00000088933 14 0.977 - - - - - - 0.977 - - golgi transport 1A [Source:ZFIN;Acc:ZDB-GENE-141212-320]
33. BX927369.7 BX927369.7 12 0.977 - - - - - - 0.977 - -
34. trim35-37 trim35-37 2 0.977 - - - - - - 0.977 - -
35. cryba2a ENSDARG00000030349 1342 0.977 - - - - - - 0.977 - - crystallin, beta A2a [Source:ZFIN;Acc:ZDB-GENE-040625-8]
36. zgc:172065 ENSDARG00000078093 2 0.977 - - - - - - 0.977 - - zgc:172065 [Source:ZFIN;Acc:ZDB-GENE-080214-2]
37. PLEKHS1_1 PLEKHS1_1 23 0.977 - - - - - - 0.977 - -
38. PDILT PDILT 6 0.977 - - - - - - 0.977 - -
39. hbl3 11 0.977 - - - - - - 0.977 - - hexose-binding lectin 3, transcript variant X1
40. btr09 ENSDARG00000054805, ENSDARG00000115798 20 0.977 - - - - - - 0.977 - - bloodthirsty-related gene family, member 9 [Source:ZFIN;Acc:ZDB-GENE-080722-46]
41. slc22a5 ENSDARG00000101021 20 0.977 - - - - - - 0.977 - - solute carrier family 22 (organic cation/carnitine transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-091012-1]
42. CR631122.1 ENSDARG00000044534 8 0.977 - - - - - - 0.977 - - protein RD3-like [Source:NCBI gene;Acc:100149591]
43. myo10l1 ENSDARG00000074723 21 0.977 - - - - - - 0.977 - - myosin X-like 1 [Source:ZFIN;Acc:ZDB-GENE-080425-1]
44. inhbab ENSDARG00000024759 29 0.977 - - - - - - 0.977 - - inhibin subunit beta Ab [Source:ZFIN;Acc:ZDB-GENE-050525-2]
45. bik ENSDARG00000045549 18 0.977 - - - - - - 0.977 - - BCL2 interacting killer [Source:ZFIN;Acc:ZDB-GENE-041210-181]
46. zgc:153039 ENSDARG00000102724 4 0.977 - - - - - - 0.977 - - zgc:153039 [Source:ZFIN;Acc:ZDB-GENE-060929-736]
47. zp2.2 ENSDARG00000105346 23 0.977 - - - - - - 0.977 - - zona pellucida glycoprotein 2, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-010622-1]
48. SI:DKEY-79P17.2 SI:DKEY-79P17.2 3 0.977 - - - - - - 0.977 - -
49. dysf ENSDARG00000007370 125 0.977 - - - - - - 0.977 - - dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive) [Source:ZFIN;Acc:ZDB-GENE-070501-1]
50. C24H16orf11 C24H16orf11 32 0.977 - - - - - - 0.977 - -
51. si:dkey-234l24.8 ENSDARG00000093588 7 0.977 - - - - - - 0.977 - - si:dkey-234l24.8 [Source:ZFIN;Acc:ZDB-GENE-050420-23]
52. si:ch211-117n7.8 si:ch211-117n7.8 83 0.977 - - - - - - 0.977 - -
53. SPAG17 SPAG17 31 0.976 - - - - - - 0.976 - -
54. ahr1b ENSDARG00000023537 44 0.976 - - - - - - 0.976 - - aryl hydrocarbon receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050922-1]
55. tceb3 40 0.976 - - - - - - 0.976 - - transcription elongation factor B (SIII), polypeptide 3
56. CNGB1 CNGB1 40 0.976 - - - - - - 0.976 - -
57. si:dkey-3d18.4 si:dkey-3d18.4 43 0.976 - - - - - - 0.976 - -
58. si:ch211-202h22.7 ENSDARG00000073912 18 0.974 - 0.974 - - - - - - - si:ch211-202h22.7 [Source:ZFIN;Acc:ZDB-GENE-090313-77]
59. pycrl pycrl 80 0.968 - - - - - - 0.968 - -
60. xrcc3 ENSDARG00000017928, ENSDARG00000113239 90 0.967 - - - - - - 0.967 - - X-ray repair complementing defective repair in Chinese hamster cells 3 [Source:ZFIN;Acc:ZDB-GENE-050320-116]
61. sema7a ENSDARG00000078707 70 0.966 - - - - - - 0.966 - - semaphorin 7A [Source:ZFIN;Acc:ZDB-GENE-030131-3633]
62. si:dkey-5n7.2 ENSDARG00000102339 42 0.966 - - - - - - 0.966 - - si:dkey-5n7.2 [Source:ZFIN;Acc:ZDB-GENE-050420-254]
63. SPEF1 ENSDARG00000022007 44 0.966 - - - - - - 0.966 - - sperm flagellar 1 [Source:HGNC Symbol;Acc:HGNC:15874]
64. BX927369.2 BX927369.2 9 0.966 - - - - - - 0.966 - -
65. rnf41l ENSDARG00000073918 329 0.966 - - - - - - 0.966 - - ring finger protein 41, like [Source:ZFIN;Acc:ZDB-GENE-030131-9441]
66. poc1b ENSDARG00000021110, ENSDARG00000116944 254 0.965 - - - - - - 0.965 - - POC1 centriolar protein B [Source:ZFIN;Acc:ZDB-GENE-031118-54]
67. ZNF337_24 ZNF337_24 16 0.964 - - - - - - 0.964 - -
68. grid2ipb ENSDARG00000095603, ENSDARG00000111282 90 0.964 - - - - - - 0.964 - - glutamate receptor, ionotropic, delta 2 (Grid2) interacting protein, b [Source:ZFIN;Acc:ZDB-GENE-040724-161]
69. zgc:63972 ENSDARG00000054288, ENSDARG00000112978 78 0.964 - - - - - - 0.964 - - zgc:63972 [Source:ZFIN;Acc:ZDB-GENE-040426-1320]
70. ttll1 ENSDARG00000090778 114 0.963 - - - - - - 0.963 - - tubulin tyrosine ligase-like family, member 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1326]
71. CITED1 ENSDARG00000077769 692 0.96 - 0.960 - - - - - - - Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5596]
72. has3 ENSDARG00000057210, ENSDARG00000116537 108 0.958 - - - - - - 0.958 - - hyaluronan synthase 3 [Source:ZFIN;Acc:ZDB-GENE-021118-1]
73. si:dkey-14a7.2 si:dkey-14a7.2 61 0.958 - - - - - - 0.958 - -
74. sdhda ENSDARG00000055712 50 0.956 - - - - - - 0.956 - - succinate dehydrogenase complex, subunit D, integral membrane protein a [Source:ZFIN;Acc:ZDB-GENE-040718-192]
75. CCNJ ENSDARG00000059917 115 0.952 - - - - - - 0.952 - - cyclin J [Source:ZFIN;Acc:ZDB-GENE-100721-4]
76. si:dkey-1f1.3 si:dkey-1f1.3 96 0.952 - - - - - - 0.952 - -
77. CU302326.2 CU302326.2 54 0.949 - - - - - - 0.949 - -
78. znf142 ENSDARG00000061373 47 0.949 - - - - - - 0.949 - - zinc finger protein 142 [Source:ZFIN;Acc:ZDB-GENE-080512-2]
79. insl5a ENSDARG00000070966, ENSDARG00000112563 45 0.947 - - - - - - 0.947 - - insulin-like 5a [Source:ZFIN;Acc:ZDB-GENE-050310-4]
80. ENSDARG00000075779 ENSDARG00000075779 64 0.946 - - - - - - 0.946 - -
81. sybl1 ENSDARG00000030775, ENSDARG00000116685 201 0.946 - - - - - - 0.946 - - synaptobrevin-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1055]
82. HDAC7 HDAC7 12 0.945 - - - - - - 0.945 - -
83. BX640537.1 ENSDARG00000099408 192 0.943 - - - - - - 0.943 - -
84. cldn17 ENSDARG00000099950 14 0.942 - - - - - - 0.942 - - claudin 17 [Source:ZFIN;Acc:ZDB-GENE-070821-2]
85. si:dkey-47k16.3 si:dkey-47k16.3 17 0.941 - - - - - 0.941 - - -
86. btr16 ENSDARG00000028850 21 0.941 - - - - - 0.941 - - - bloodthirsty-related gene family, member 16 [Source:ZFIN;Acc:ZDB-GENE-060929-1066]
87. stx12l ENSDARG00000044605 99 0.941 0.941 - - - - - - - - syntaxin 12, like [Source:ZFIN;Acc:ZDB-GENE-110715-1]
88. si:ch211-160d14.11 si:ch211-160d14.11 2 0.941 - - - - - - 0.941 - -
89. pdzd3b ENSDARG00000055656 3 0.941 - - - - - - 0.941 - - PDZ domain containing 3b [Source:ZFIN;Acc:ZDB-GENE-081022-151]
90. SPAG1 SPAG1 44 0.94 - - - - - - 0.940 - -
91. cyth3 cyth3 120 0.935 - - - - - - 0.935 - -
92. 5S_rRNA_20 5S_rRNA_20 79 0.934 - - - - - - 0.934 - -
93. zgc:174178 zgc:174178 104 0.934 - - - - - - 0.934 - -
94. pald1b ENSDARG00000039352 66 0.934 - - - - - - 0.934 - - phosphatase domain containing, paladin 1b [Source:ZFIN;Acc:ZDB-GENE-070424-88]
95. hoxd13a ENSDARG00000059256 1190 0.932 - - - - - - 0.932 - - homeobox D13a [Source:ZFIN;Acc:ZDB-GENE-990415-119]
96. pdk3b ENSDARG00000099791 50 0.931 - - - - - - 0.931 - - pyruvate dehydrogenase kinase, isozyme 3b [Source:ZFIN;Acc:ZDB-GENE-070112-1892]
97. QSOX2 ENSDARG00000077174 26 0.931 0.931 - - - - - - - - quiescin Q6 sulfhydryl oxidase 2 [Source:ZFIN;Acc:ZDB-GENE-110203-4]
98. ap4e1 ENSDARG00000103684 171 0.931 - - - - - - 0.931 - - adaptor related protein complex 4 subunit epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-061221-3]
99. ppp2r3c ENSDARG00000043972 233 0.93 - - - - - - 0.930 - - protein phosphatase 2, regulatory subunit B'', gamma [Source:ZFIN;Acc:ZDB-GENE-040426-715]
100. osbpl1a ENSDARG00000105147 42 0.93 - - - - - - 0.930 - - oxysterol binding protein-like 1A [Source:ZFIN;Acc:ZDB-GENE-050208-657]

There are 823 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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