Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for tubd1

Gene Name Gene ID Reads Annotation
tubd1 ENSDARG00000058219, ENSDARG00000110746 47 tubulin, delta 1 [Source:ZFIN;Acc:ZDB-GENE-040625-73]










Genes with expression patterns similar to tubd1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tubd1 ENSDARG00000058219, ENSDARG00000110746 47 8 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 tubulin, delta 1 [Source:ZFIN;Acc:ZDB-GENE-040625-73]
2. DNAH10 ENSDARG00000061486 29 1.705 - 0.705 - - - - 1.000 - - dynein axonemal heavy chain 10 [Source:HGNC Symbol;Acc:HGNC:2941]
3. kctd12.1 ENSDARG00000069843, ENSDARG00000113802 141 1.619 0.813 0.806 - - - - - - - potassium channel tetramerisation domain containing 12.1 [Source:ZFIN;Acc:ZDB-GENE-030902-5]
4. elovl4a ENSDARG00000006773 412 1.559 - 0.805 - - 0.754 - - - - ELOVL fatty acid elongase 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1767]
5. CU302326.3 CU302326.3 6 1.511 - 0.741 0.770 - - - - - -
6. mybpc2a ENSDARG00000030157 11 1.506 - - 0.770 - 0.736 - - - - myosin binding protein C, fast type a [Source:ZFIN;Acc:ZDB-GENE-060901-1]
7. si:ch211-81a5.8 ENSDARG00000070972 59 1.5 0.773 - - - - - 0.727 - - si:ch211-81a5.8 [Source:ZFIN;Acc:ZDB-GENE-060503-138]
8. eif4a1a ENSDARG00000092115 46 1.499 - 0.788 - - 0.711 - - - - eukaryotic translation initiation factor 4A1A [Source:ZFIN;Acc:ZDB-GENE-031030-2]
9. htr1b ENSDARG00000053987 11 1.497 - - 0.770 - - - 0.727 - - 5-hydroxytryptamine (serotonin) receptor 1B [Source:ZFIN;Acc:ZDB-GENE-081022-141]
10. colm colm 36 1.49 - 0.763 - - - - 0.727 - -
11. hcst ENSDARG00000092074 172 1.479 - 0.705 - - - - 0.774 - - hematopoietic cell signal transducer [Source:ZFIN;Acc:ZDB-GENE-061130-1]
12. myhb ENSDARG00000001993 11 1.479 - - 0.752 - - - 0.727 - - myosin, heavy chain b [Source:ZFIN;Acc:ZDB-GENE-081124-1]
13. zgc:113426 ENSDARG00000051793 37 1.478 - 0.705 0.773 - - - - - - zgc:113426 [Source:ZFIN;Acc:ZDB-GENE-050913-149]
14. TRPC4_1 TRPC4_1 212 1.444 - 0.705 - - 0.739 - - - -
15. CACNA2D1 ENSDARG00000073752 6 1.442 - 0.705 - - - - - 0.737 - calcium voltage-gated channel auxiliary subunit alpha2delta 1 [Source:HGNC Symbol;Acc:HGNC:1399]
16. PLCXD1_3 PLCXD1_3 35 1.432 - 0.705 - - - - 0.727 - -
17. FP074874.2 ENSDARG00000105724 107 1.432 - 0.705 - - - - 0.727 - -
18. chia.3 ENSDARG00000009612 14 1.43 - - - - 0.703 - 0.727 - - chitinase, acidic.3 [Source:ZFIN;Acc:ZDB-GENE-040426-2891]
19. CT573494.2 CT573494.2 58 1.429 0.702 - - - - - 0.727 - -
20. cdk15 ENSDARG00000006093 252 1.422 - 0.703 - - - - 0.719 - - cyclin-dependent kinase 15 [Source:ZFIN;Acc:ZDB-GENE-060421-7193]
21. si:ch211-57f7.7 ENSDARG00000093131 8 1 - - - - - - 1.000 - - si:ch211-57f7.7 [Source:ZFIN;Acc:ZDB-GENE-090313-119]
22. zgc:162144 ENSDARG00000037603, ENSDARG00000109982 11 1 - - - - - - 1.000 - - zgc:162144 [Source:ZFIN;Acc:ZDB-GENE-030131-7630]
23. CABZ01024201.1 CABZ01024201.1 30 1 - - - - - - 1.000 - -
24. CLMN ENSDARG00000096867 73 1 - - - - - - 1.000 - - calmin [Source:ZFIN;Acc:ZDB-GENE-131127-546]
25. osbp2 ENSDARG00000053487 42 1 - - - - - - 1.000 - - oxysterol binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-091113-18]
26. si:ch211-236g6.1 ENSDARG00000071590 28 0.948 - - - - - - 0.948 - - si:ch211-236g6.1 [Source:ZFIN;Acc:ZDB-GENE-050208-448]
27. rars2 ENSDARG00000032277 54 0.946 - 0.946 - - - - - - - arginyl-tRNA synthetase 2, mitochondrial (putative) [Source:ZFIN;Acc:ZDB-GENE-040426-1244]
28. trpm1b ENSDARG00000103476 369 0.943 - 0.943 - - - - - - - transient receptor potential cation channel, subfamily M, member 1b [Source:ZFIN;Acc:ZDB-GENE-070424-31]
29. itfg2 ENSDARG00000002174 114 0.941 - 0.941 - - - - - - - integrin alpha FG-GAP repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-041008-161]
30. adarb1b ENSDARG00000003544 31 0.941 - 0.941 - - - - - - - adenosine deaminase, RNA-specific, B1b [Source:ZFIN;Acc:ZDB-GENE-030219-15]
31. KIF13A ENSDARG00000069594 352 0.931 - 0.931 - - - - - - - kinesin family member 13A [Source:ZFIN;Acc:ZDB-GENE-090901-1]
32. bnip3 ENSDARG00000099961 78 0.929 - 0.929 - - - - - - - BCL2 interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8060]
33. EGLN1 EGLN1 62 0.928 - 0.928 - - - - - - -
34. nipsnap3 nipsnap3 76 0.919 - - - - 0.919 - - - -
35. msmo1 ENSDARG00000055876, ENSDARG00000110767, ENSDARG00000115922 195 0.917 - - - - 0.917 - - - - methylsterol monooxygenase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2670]
36. AKR1C1 AKR1C1 32 0.916 - 0.916 - - - - - - -
37. kif19 ENSDARG00000053026 124 0.916 - - - - 0.916 - - - - kinesin family member 19 [Source:ZFIN;Acc:ZDB-GENE-080215-2]
38. jag1a ENSDARG00000030289 1275 0.915 - 0.915 - - - - - - - jagged 1a [Source:ZFIN;Acc:ZDB-GENE-011128-2]
39. acrc 242 0.912 - 0.912 - - - - - - - acidic repeat containing, transcript variant X3
40. lingo4b ENSDARG00000078527 235 0.907 0.907 - - - - - - - - leucine rich repeat and Ig domain containing 4b [Source:ZFIN;Acc:ZDB-GENE-091214-3]
41. PEG3_4 PEG3_4 256 0.905 - 0.905 - - - - - - -
42. il17d ENSDARG00000010700, ENSDARG00000115462 102 0.904 - - - - - - 0.904 - - interleukin 17d [Source:ZFIN;Acc:ZDB-GENE-061031-4]
43. crispld1b ENSDARG00000013293 200 0.904 - 0.904 - - - - - - - cysteine-rich secretory protein LCCL domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1204]
44. cyp2ad6 ENSDARG00000042956 59 0.903 - - - - - - - - 0.903 cytochrome P450, family 2, subfamily AD, polypeptide 6 [Source:ZFIN;Acc:ZDB-GENE-041001-157]
45. nptx1l ENSDARG00000074671 569 0.898 - 0.898 - - - - - - - neuronal pentraxin 1 like [Source:ZFIN;Acc:ZDB-GENE-040426-2418]
46. KIF3A ENSDARG00000087538, ENSDARG00000109880, ENSDARG00000117005 95 0.896 - - - - - - 0.896 - - kinesin family member 3A [Source:ZFIN;Acc:ZDB-GENE-050417-71]
47. si:ch211-210c8.5 si:ch211-210c8.5 6 0.892 - - - - 0.892 - - - -
48. heatr1_1 ENSDARG00000099742 45 0.889 - - - - 0.889 - - - - HEAT repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6378]
49. ZNF337_7 ZNF337_7 198 0.886 - 0.886 - - - - - - -
50. hormad1 ENSDARG00000040254 12 0.885 - 0.885 - - - - - - - HORMA domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040718-49]
51. SNORD10 SNORD10 71 0.879 - - - - 0.879 - - - -
52. foxj1b ENSDARG00000088290 343 0.877 - 0.877 - - - - - - - forkhead box J1b [Source:ZFIN;Acc:ZDB-GENE-041212-76]
53. sec22bb ENSDARG00000100435 33 0.876 - - - - 0.876 - - - - SEC22 homolog B, vesicle trafficking protein b [Source:ZFIN;Acc:ZDB-GENE-030131-5488]
54. ugt5e1 ENSDARG00000058048 25 0.876 - - - - 0.876 - - - - UDP glucuronosyltransferase 5 family, polypeptide E1 [Source:ZFIN;Acc:ZDB-GENE-081105-106]
55. URB1_1 URB1_1 8 0.873 - - - - 0.873 - - - -
56. kcnc4 ENSDARG00000061288, ENSDARG00000113894 95 0.872 - - - - 0.872 - - - - potassium voltage-gated channel, Shaw-related subfamily, member 4 [Source:ZFIN;Acc:ZDB-GENE-060503-773]
57. celf3a ENSDARG00000034668 2432 0.872 - 0.872 - - - - - - - cugbp, Elav-like family member 3a [Source:ZFIN;Acc:ZDB-GENE-000501-2]
58. si:dkey-13n23.3 ENSDARG00000070465, ENSDARG00000102714 85 0.872 - 0.872 - - - - - - - si:dkey-13n23.3 [Source:ZFIN;Acc:ZDB-GENE-120214-42]
59. si:ch73-222f22.2 ENSDARG00000094271, ENSDARG00000095763 18 0.871 - 0.871 - - - - - - - si:ch73-222f22.2 [Source:ZFIN;Acc:ZDB-GENE-100921-20]
60. nots ENSDARG00000099824 9 0.871 - 0.871 - - - - - - - nothepsin [Source:ZFIN;Acc:ZDB-GENE-010620-1]
61. capn1b ENSDARG00000052748, ENSDARG00000117045 320 0.871 - 0.871 - - - - - - - calpain 1, (mu/I) large subunit b [Source:ZFIN;Acc:ZDB-GENE-060503-491]
62. mknk2a ENSDARG00000011373 230 0.871 - 0.871 - - - - - - - MAP kinase interacting serine/threonine kinase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-6099]
63. CABZ01028403.3 CABZ01028403.3 4 0.871 - 0.871 - - - - - - -
64. si:dkey-202n8.1 si:dkey-202n8.1 35 0.871 - 0.871 - - - - - - -
65. zgc:174862 ENSDARG00000077571 201 0.871 - 0.871 - - - - - - - zgc:174862 [Source:ZFIN;Acc:ZDB-GENE-080303-29]
66. dscamb ENSDARG00000028118 82 0.871 - 0.871 - - - - - - - Down syndrome cell adhesion molecule b [Source:ZFIN;Acc:ZDB-GENE-031118-67]
67. CABZ01063402.1 CABZ01063402.1 64 0.871 - - - - 0.871 - - - -
68. zgc:193682 zgc:193682 15 0.871 - 0.871 - - - - - - -
69. CABZ01067743.1 CABZ01067743.1 48 0.871 - 0.871 - - - - - - -
70. pou4f2 ENSDARG00000069737 451 0.871 - 0.871 - - - - - - - POU class 4 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-040401-1]
71. sc:d0661 sc:d0661 12 0.871 - 0.871 - - - - - - -
72. CABZ01072511.1 CABZ01072511.1 88 0.871 - 0.871 - - - - - - -
73. CABZ01090951.1 CABZ01090951.1 78 0.871 - 0.871 - - - - - - -
74. fgf6b ENSDARG00000045856 136 0.871 - 0.871 - - - - - - - fibroblast growth factor 6b [Source:ZFIN;Acc:ZDB-GENE-050201-5]
75. NHSL1 NHSL1 182 0.871 - 0.871 - - - - - - -
76. csf1b ENSDARG00000068263 248 0.868 - 0.868 - - - - - - - colony stimulating factor 1b (macrophage) [Source:ZFIN;Acc:ZDB-GENE-061215-106]
77. C20H2orf44 C20H2orf44 486 0.868 - 0.868 - - - - - - -
78. BX511257.1 BX511257.1 66 0.868 - 0.868 - - - - - - -
79. KIF21B ENSDARG00000009733 53 0.867 - - - - 0.867 - - - - kinesin family member 21B [Source:ZFIN;Acc:ZDB-GENE-130530-537]
80. si:dkey-240h12.3 ENSDARG00000095458 7 0.867 - - - - 0.867 - - - - si:dkey-240h12.3 [Source:ZFIN;Acc:ZDB-GENE-070705-405]
81. SRCRB4D SRCRB4D 4 0.867 - - - - 0.867 - - - -
82. si:ch211-276k2.2 4 0.867 - - - - 0.867 - - - - si:ch211-276k2.2
83. si:dkey-1b17.1 ENSDARG00000102258 15 0.867 - - - - 0.867 - - - - si:dkey-1b17.1 [Source:ZFIN;Acc:ZDB-GENE-050208-688]
84. si:dkey-60b12.9 si:dkey-60b12.9 3 0.867 - - - - 0.867 - - - -
85. prdm2a ENSDARG00000090721 11 0.867 - - - - 0.867 - - - - PR domain containing 2, with ZNF domain a [Source:ZFIN;Acc:ZDB-GENE-081104-139]
86. slc17a8 ENSDARG00000057728, ENSDARG00000109791 8 0.867 - - - - 0.867 - - - - solute carrier family 17 (vesicular glutamate transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-060503-416]
87. tbkbp1 ENSDARG00000061473 24 0.867 - - - - 0.867 - - - - TBK1 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-100203-1]
88. ifnphi1 ENSDARG00000025607 6 0.867 - - - - 0.867 - - - - interferon phi 1 [Source:ZFIN;Acc:ZDB-GENE-030721-3]
89. AVL9 ENSDARG00000055538 329 0.865 - 0.865 - - - - - - - AVL9 homolog (S. cerevisiase) [Source:ZFIN;Acc:ZDB-GENE-060825-261]
90. polg ENSDARG00000060951 33 0.864 - - - - - - 0.864 - - polymerase (DNA directed), gamma [Source:ZFIN;Acc:ZDB-GENE-060303-1]
91. lcp2a ENSDARG00000055955 23 0.862 - - - - 0.862 - - - - lymphocyte cytosolic protein 2a [Source:ZFIN;Acc:ZDB-GENE-041114-97]
92. asb16 ENSDARG00000056468, ENSDARG00000110292 126 0.862 - 0.862 - - - - - - - ankyrin repeat and SOCS box containing 16 [Source:ZFIN;Acc:ZDB-GENE-031031-3]
93. pprc1 ENSDARG00000090337 434 0.862 - - - - - - 0.862 - - peroxisome proliferator-activated receptor gamma, coactivator-related 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9858]
94. si:ch211-80h18.1 ENSDARG00000078522 1941 0.862 - 0.862 - - - - - - - si:ch211-80h18.1 [Source:ZFIN;Acc:ZDB-GENE-070705-257]
95. pcdh2ac ENSDARG00000099783 325 0.862 - 0.862 - - - - - - - protocadherin 2 alpha c [Source:ZFIN;Acc:ZDB-GENE-041118-12]
96. FAM196A 82 0.861 - 0.861 - - - - - - - family with sequence similarity 196 member A
97. SLC9A3R2_1 SLC9A3R2_1 28 0.86 - - - - 0.860 - - - -
98. chek2 ENSDARG00000025820, ENSDARG00000115597 77 0.86 - 0.860 - - - - - - - checkpoint kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8942]
99. epm2a ENSDARG00000059044 10 0.858 - - - - 0.858 - - - - epilepsy, progressive myoclonus type 2A, Lafora disease (laforin) [Source:ZFIN;Acc:ZDB-GENE-100922-143]
100. sprb ENSDARG00000058553 1694 0.858 - 0.858 - - - - - - - sepiapterin reductase b [Source:ZFIN;Acc:ZDB-GENE-070719-1]

There are 691 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA