Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for tubb4b

Gene Name Gene ID Reads Annotation
tubb4b ENSDARG00000002344 30333 tubulin, beta 4B class IVb [Source:ZFIN;Acc:ZDB-GENE-030131-8625]










Genes with expression patterns similar to tubb4b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tubb4b ENSDARG00000002344 30333 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 tubulin, beta 4B class IVb [Source:ZFIN;Acc:ZDB-GENE-030131-8625]
2. zgc:123194 zgc:123194 69174 3.199 0.747 - - - 0.720 0.825 - 0.907 -
3. hnrnpa0l ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 72444 2.399 0.770 - 0.735 - - 0.894 - - - heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
4. snrpd1 ENSDARG00000011648 8615 2.306 0.760 - 0.753 - - - - 0.793 - small nuclear ribonucleoprotein D1 polypeptide [Source:ZFIN;Acc:ZDB-GENE-020419-14]
5. ssbp4 ENSDARG00000056483 10196 2.278 0.765 - - - 0.703 - - 0.810 - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
6. eif3c ENSDARG00000016443 18003 1.841 - - - - - - 0.987 - 0.854 eukaryotic translation initiation factor 3, subunit C [Source:ZFIN;Acc:ZDB-GENE-030131-6166]
7. rbx1 ENSDARG00000038030 14611 1.839 - - - - - - 0.979 - 0.860 ring-box 1, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-041008-106]
8. mat2aa ENSDARG00000040334 10769 1.836 - - - - - 0.852 0.984 - - methionine adenosyltransferase II, alpha a [Source:ZFIN;Acc:ZDB-GENE-030131-2049]
9. snd1 ENSDARG00000006766 12906 1.826 - - - 0.836 - - 0.990 - - staphylococcal nuclease and tudor domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3124]
10. setb ENSDARG00000003920 21788 1.791 - - - 0.857 - - - - 0.934 SET nuclear proto-oncogene b [Source:ZFIN;Acc:ZDB-GENE-030131-433]
11. tfam ENSDARG00000063145 4524 1.725 - - - 0.855 - - - - 0.870 transcription factor A, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-061013-552]
12. cx43.4 ENSDARG00000007099 16369 1.725 - - 0.733 - - - 0.992 - - connexin 43.4 [Source:ZFIN;Acc:ZDB-GENE-990415-38]
13. nr2f1a ENSDARG00000052695 5037 1.707 - - - - - - 0.974 0.733 - nuclear receptor subfamily 2, group F, member 1a [Source:ZFIN;Acc:ZDB-GENE-980526-115]
14. col12a1b ENSDARG00000019601 9985 1.705 - - - - - 0.864 - - 0.841 collagen, type XII, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-120215-116]
15. arpc2 ENSDARG00000075989 22423 1.704 - - - - - 0.858 - - 0.846 actin related protein 2/3 complex, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5276]
16. ndrg2 ENSDARG00000011170 11442 1.686 - - - 0.831 - - - - 0.855 NDRG family member 2 [Source:ZFIN;Acc:ZDB-GENE-041212-15]
17. pbx4 ENSDARG00000052150 35676 1.677 0.734 - - - - 0.943 - - - pre-B-cell leukemia transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-000201-18]
18. alyref ENSDARG00000077732 25934 1.649 - 0.719 - - - - - - 0.930 Aly/REF export factor [Source:ZFIN;Acc:ZDB-GENE-070928-29]
19. anp32a ENSDARG00000006487 28249 1.644 0.759 - - - 0.885 - - - - acidic (leucine-rich) nuclear phosphoprotein 32 family, member A [Source:ZFIN;Acc:ZDB-GENE-030131-7850]
20. h3f3a 66671 1.644 0.837 - - - - - - 0.807 - H3 histone, family 3A, transcript variant X1
21. ddx39aa ENSDARG00000006225, ENSDARG00000116665 6675 1.623 - - 0.728 0.895 - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Aa [Source:ZFIN;Acc:ZDB-GENE-030131-4275]
22. drap1 ENSDARG00000041203 6749 1.611 - - - 0.877 - - - 0.734 - DR1-associated protein 1 (negative cofactor 2 alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-400]
23. nrarpa ENSDARG00000091419, ENSDARG00000111485 7867 1.605 - - 0.723 0.882 - - - - - NOTCH regulated ankyrin repeat protein a [Source:ZFIN;Acc:ZDB-GENE-030515-6]
24. khsrp ENSDARG00000026489 15738 1.59 0.756 - - 0.834 - - - - - KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
25. hdlbp hdlbp 41842 1.558 - 0.814 - 0.744 - - - - -
26. si:dkeyp-86f7.3 si:dkeyp-86f7.3 92941 1.545 0.820 - - - - - 0.725 - -
27. rbb4l ENSDARG00000015208 5542 1.542 0.757 - 0.785 - - - - - - retinoblastoma binding protein 4, like [Source:ZFIN;Acc:ZDB-GENE-030131-848]
28. sumo3a ENSDARG00000028119 13447 1.533 0.701 - - - 0.832 - - - - small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
29. rbm4.3 ENSDARG00000022129 28571 1.53 0.763 - - - - - - 0.767 - RNA binding motif protein 4.3 [Source:ZFIN;Acc:ZDB-GENE-040426-1938]
30. syncrip ENSDARG00000040184 24690 1.529 - - - 0.809 - 0.720 - - - synaptotagmin binding, cytoplasmic RNA interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-4862]
31. eif4a3 ENSDARG00000102978 16162 1.527 0.720 - 0.807 - - - - - - eukaryotic translation initiation factor 4A3 [Source:ZFIN;Acc:ZDB-GENE-040426-915]
32. srsf7a ENSDARG00000035325, ENSDARG00000110705 11788 1.52 - - 0.733 - - - - 0.787 - serine/arginine-rich splicing factor 7a [Source:ZFIN;Acc:ZDB-GENE-040426-1798]
33. ptmab ENSDARG00000101766 182812 1.507 0.741 - - - - - - 0.766 - prothymosin alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-8681]
34. akirin2 ENSDARG00000058729 13245 1.492 - - - - 0.752 - - 0.740 - akirin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2944]
35. ilf2 ENSDARG00000014591 14543 1.482 - - 0.729 - - - - 0.753 - interleukin enhancer binding factor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2345]
36. actn3a ENSDARG00000013755, ENSDARG00000111128 22706 1.48 - - - - - 0.722 0.758 - - actinin alpha 3a [Source:ZFIN;Acc:ZDB-GENE-000329-9]
37. h3f3b.1_1 ENSDARG00000020504, ENSDARG00000068434, ENSDARG00000068436 26947 1.454 0.715 - - - 0.739 - - - - H3 histone, family 3B.1 [Source:ZFIN;Acc:ZDB-GENE-050417-65]
38. rrm2_1 ENSDARG00000020711, ENSDARG00000078069 11634 1.453 0.735 - 0.718 - - - - - - ribonucleotide reductase M2 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-25]
39. si:ch211-51e12.7 ENSDARG00000045914 9598 1.451 0.733 0.718 - - - - - - - si:ch211-51e12.7 [Source:ZFIN;Acc:ZDB-GENE-030131-8279]
40. RLTPR 1158 1.447 0.736 - - - - - - 0.711 - RGD motif, leucine rich repeats, tropomodulin domain and proline-rich containing, transcript variant X1
41. tia1 ENSDARG00000052536, ENSDARG00000114478 4392 1.415 - - 0.710 - - - - 0.705 - TIA1 cytotoxic granule-associated RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-1506]
42. lamc1 ENSDARG00000036279 11025 0.993 - - - - - - 0.993 - - laminin, gamma 1 [Source:ZFIN;Acc:ZDB-GENE-021226-3]
43. qkia ENSDARG00000097478 18572 0.993 - - - - - - 0.993 - - QKI, KH domain containing, RNA binding a [Source:ZFIN;Acc:ZDB-GENE-990415-230]
44. ENSDARG00000070355 ENSDARG00000070355 8316 0.991 - - - - - - 0.991 - -
45. lzts2a ENSDARG00000074597, ENSDARG00000113794 7477 0.99 - - - - - - 0.990 - - leucine zipper, putative tumor suppressor 2a [Source:ZFIN;Acc:ZDB-GENE-090313-276]
46. psmd6 ENSDARG00000070674 4675 0.989 - - - - - - 0.989 - - proteasome 26S subunit, non-ATPase 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1038]
47. oaz1a ENSDARG00000071403 21112 0.988 - - - - - - 0.988 - - ornithine decarboxylase antizyme 1a [Source:ZFIN;Acc:ZDB-GENE-020731-4]
48. rnaseka ENSDARG00000069461 10304 0.987 - - - - - - 0.987 - - ribonuclease, RNase K a [Source:ZFIN;Acc:ZDB-GENE-060825-301]
49. ywhaba ENSDARG00000013078 42000 0.986 - - - - - - 0.986 - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide a [Source:ZFIN;Acc:ZDB-GENE-030131-6583]
50. hoxb8a ENSDARG00000056027 6340 0.986 - - - - - - 0.986 - - homeobox B8a [Source:ZFIN;Acc:ZDB-GENE-990415-108]
51. vamp3 ENSDARG00000070161 6396 0.986 - - - - - - 0.986 - - vesicle-associated membrane protein 3 (cellubrevin) [Source:ZFIN;Acc:ZDB-GENE-040625-45]
52. rab5aa ENSDARG00000018602 8947 0.986 - - - - - - 0.986 - - RAB5A, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-030131-139]
53. ndufa7 ENSDARG00000036684 6051 0.985 - - - - - - 0.985 - - NADH:ubiquinone oxidoreductase subunit A7 [Source:ZFIN;Acc:ZDB-GENE-040801-169]
54. FP102272.1 FP102272.1 9473 0.985 - - - - - - 0.985 - -
55. sec31a ENSDARG00000021082, ENSDARG00000111434, ENSDARG00000114514 6991 0.985 - - - - - - 0.985 - - SEC31 homolog A, COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-020919-2]
56. bin2a ENSDARG00000003219 1369 0.985 - - - - - - 0.985 - - bridging integrator 2a [Source:ZFIN;Acc:ZDB-GENE-041114-126]
57. rab1ba ENSDARG00000058044 5080 0.985 - - - - - - 0.985 - - zRAB1B, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-040426-873]
58. dusp4 ENSDARG00000044688, ENSDARG00000112584, ENSDARG00000116379 3232 0.985 - - - - - - 0.985 - - dual specificity phosphatase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-709]
59. parp1 ENSDARG00000019529 6787 0.985 - - - - - - 0.985 - - poly (ADP-ribose) polymerase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3955]
60. cisd1 ENSDARG00000079516, ENSDARG00000114546 2677 0.985 - - - - - - 0.985 - - CDGSH iron sulfur domain 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1162]
61. sh3gl3a ENSDARG00000013360 3602 0.985 - - - - - - 0.985 - - SH3-domain GRB2-like 3a [Source:ZFIN;Acc:ZDB-GENE-070112-242]
62. slc16a12b ENSDARG00000089885 3744 0.985 - - - - - - 0.985 - - solute carrier family 16, member 12b [Source:ZFIN;Acc:ZDB-GENE-050522-80]
63. cmip ENSDARG00000062933 4521 0.985 - - - - - - 0.985 - - c-Maf inducing protein [Source:ZFIN;Acc:ZDB-GENE-050419-50]
64. lgals3l lgals3l 3833 0.984 - - - - - - 0.984 - -
65. IDH2 ENSDARG00000003795 18659 0.984 - - - - - - 0.984 - - isocitrate dehydrogenase 2 (NADP+), mitochondrial [Source:ZFIN;Acc:ZDB-GENE-031118-95]
66. EIF4G1_1 EIF4G1_1 3721 0.984 - - - - - - 0.984 - -
67. chd2 ENSDARG00000060687 3832 0.984 - - - - - - 0.984 - - chromodomain helicase DNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050419-256]
68. zgc:101000 zgc:101000 9041 0.984 - - - - - - 0.984 - -
69. CT955967.1 ENSDARG00000099956 2885 0.984 - - - - - - 0.984 - -
70. stx12 ENSDARG00000098813 2576 0.984 - - - - - - 0.984 - - syntaxin 12 [Source:ZFIN;Acc:ZDB-GENE-040625-11]
71. BX548078.1 ENSDARG00000093780 1325 0.984 - - - - - - 0.984 - -
72. serpine2 ENSDARG00000029353 2274 0.984 - - - - - - 0.984 - - serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-848]
73. rbm39a ENSDARG00000011613 4520 0.984 - - - - - - 0.984 - - RNA binding motif protein 39a [Source:ZFIN;Acc:ZDB-GENE-040426-2852]
74. loxl2a ENSDARG00000044010 1906 0.983 - - - - - - 0.983 - - lysyl oxidase-like 2a [Source:ZFIN;Acc:ZDB-GENE-070818-1]
75. MRPS28 ENSDARG00000041538, ENSDARG00000114420 2014 0.983 - - - - - - 0.983 - - mitochondrial ribosomal protein S28 [Source:ZFIN;Acc:ZDB-GENE-061110-52]
76. PCDH9 ENSDARG00000063264 1309 0.983 - - - - - - 0.983 - - protocadherin 9 [Source:ZFIN;Acc:ZDB-GENE-091015-1]
77. efcab7 ENSDARG00000020279 1030 0.983 - - - - - - 0.983 - - EF-hand calcium binding domain 7 [Source:ZFIN;Acc:ZDB-GENE-040625-115]
78. cep97 ENSDARG00000102407 1154 0.983 - - - - - - 0.983 - - centrosomal protein 97 [Source:ZFIN;Acc:ZDB-GENE-031030-11]
79. TUBGCP6 1991 0.983 - - - - - - 0.983 - - tubulin, gamma complex associated protein 6
80. phf2 ENSDARG00000018691 3341 0.983 - - - - - - 0.983 - - PHD finger protein 2 [Source:ZFIN;Acc:ZDB-GENE-050302-10]
81. rgma ENSDARG00000012248 2238 0.983 - - - - - - 0.983 - - repulsive guidance molecule BMP co-receptor a [Source:ZFIN;Acc:ZDB-GENE-040527-1]
82. tomm20b ENSDARG00000103566 12436 0.983 - - - - - - 0.983 - - translocase of outer mitochondrial membrane 20b [Source:ZFIN;Acc:ZDB-GENE-040718-451]
83. wu:fj08f03 wu:fj08f03 1337 0.983 - - - - - - 0.983 - -
84. suclg1 ENSDARG00000052712 17570 0.983 - - - - - - 0.983 - - succinate-CoA ligase, alpha subunit [Source:ZFIN;Acc:ZDB-GENE-040912-101]
85. AL772300.3 AL772300.3 1752 0.983 - - - - - - 0.983 - -
86. aspg ENSDARG00000052942 1406 0.983 - - - - - - 0.983 - - asparaginase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-070820-14]
87. cth ENSDARG00000074301 3860 0.983 - - - - - - 0.983 - - cystathionase (cystathionine gamma-lyase) [Source:ZFIN;Acc:ZDB-GENE-030131-774]
88. loxl1 ENSDARG00000054451 2485 0.982 - - - - - - 0.982 - - lysyl oxidase-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-693]
89. CU463857.1 CU463857.1 5541 0.981 - - - - - - 0.981 - -
90. srsf5a ENSDARG00000029818 15600 0.981 - - - - - - 0.981 - - serine/arginine-rich splicing factor 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7336]
91. hmgcl ENSDARG00000021220 2468 0.974 - - - - - - 0.974 - - 3-hydroxy-3-methylglutaryl-CoA lyase [Source:ZFIN;Acc:ZDB-GENE-040426-958]
92. khdrbs1a ENSDARG00000052856 53666 0.974 - - - - - - 0.974 - - KH domain containing, RNA binding, signal transduction associated 1a [Source:ZFIN;Acc:ZDB-GENE-000210-25]
93. ldha ENSDARG00000101251 10868 0.971 - - - - - - 0.971 - - lactate dehydrogenase A4 [Source:ZFIN;Acc:ZDB-GENE-991026-5]
94. rpl32 ENSDARG00000054818, ENSDARG00000110237, ENSDARG00000115707 37036 0.963 - - - - - - 0.963 - - ribosomal protein L32 [Source:ZFIN;Acc:ZDB-GENE-060331-105]
95. tpi1b ENSDARG00000040988, ENSDARG00000113061 29752 0.96 - - - - - - 0.960 - - triosephosphate isomerase 1b [Source:ZFIN;Acc:ZDB-GENE-020416-4]
96. nqo1 ENSDARG00000010250 6430 0.955 - - - - - - 0.955 - - NAD(P)H dehydrogenase, quinone 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1226]
97. wnk1b ENSDARG00000039392 3587 0.953 - - - - - - 0.953 - - WNK lysine deficient protein kinase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2656]
98. fabp1b.1 ENSDARG00000059227 5670 0.942 - - - - - - 0.942 - - fatty acid binding protein 1b, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050522-96]
99. ywhabb ENSDARG00000075758 23104 0.939 - - - - - 0.939 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide b [Source:ZFIN;Acc:ZDB-GENE-040426-2160]
100. elavl3 ENSDARG00000014420 8644 0.935 - - - - - - - - 0.935 ELAV like neuron-specific RNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-980526-76]

There are 466 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA