Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for tubb1

Gene Name Gene ID Reads Annotation
tubb1 ENSDARG00000053066 364 tubulin, beta 1 class VI [Source:ZFIN;Acc:ZDB-GENE-110408-5]










Genes with expression patterns similar to tubb1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tubb1 ENSDARG00000053066 364 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 tubulin, beta 1 class VI [Source:ZFIN;Acc:ZDB-GENE-110408-5]
2. WAPAL_1 WAPAL_1 205 1.812 - - - - - - - 0.886 0.926
3. pus7 ENSDARG00000031774 195 1.768 - 0.829 - - - - - - 0.939 pseudouridylate synthase 7 [Source:ZFIN;Acc:ZDB-GENE-060620-1]
4. kif18a ENSDARG00000008022 546 1.739 - 0.829 - - - - - - 0.910 kinesin family member 18A [Source:ZFIN;Acc:ZDB-GENE-040426-862]
5. papss1 ENSDARG00000057099 809 1.732 - 0.836 - - - - - - 0.896 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [Source:ZFIN;Acc:ZDB-GENE-080721-5]
6. ZFAT ENSDARG00000077987 205 1.73 0.771 - - - - - - - 0.959 zinc finger and AT hook domain containing [Source:ZFIN;Acc:ZDB-GENE-130204-2]
7. tmem63bb ENSDARG00000106631 503 1.73 - - - - - - - 0.801 0.929 transmembrane protein 63Bb [Source:NCBI gene;Acc:569678]
8. oraov1 497 1.722 0.774 - - - - - - - 0.948 oral cancer overexpressed 1
9. hdac10 ENSDARG00000086458 676 1.714 - - - - - 0.761 - - 0.953 histone deacetylase 10 [Source:ZFIN;Acc:ZDB-GENE-030131-5464]
10. dmbx1b ENSDARG00000002510 351 1.713 - - - - - - - 0.799 0.914 diencephalon/mesencephalon homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-050417-97]
11. hspb6 ENSDARG00000077236 209 1.713 - 0.886 - - - 0.827 - - - heat shock protein, alpha-crystallin-related, b6 [Source:ZFIN;Acc:ZDB-GENE-080214-7]
12. kcnq5a ENSDARG00000069954 492 1.678 - 0.728 - - - - - - 0.950 potassium voltage-gated channel, KQT-like subfamily, member 5a [Source:ZFIN;Acc:ZDB-GENE-090312-185]
13. srebf1 ENSDARG00000067607 1537 1.668 - - - - - - - 0.849 0.819 sterol regulatory element binding transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-090812-3]
14. nfe2 ENSDARG00000020606 224 1.664 - - - - - - 0.730 0.934 - nuclear factor, erythroid 2 [Source:ZFIN;Acc:ZDB-GENE-030124-1]
15. tmtc4 ENSDARG00000020447 873 1.662 - - - - - - - 0.758 0.904 transmembrane and tetratricopeptide repeat containing 4 [Source:ZFIN;Acc:ZDB-GENE-070912-148]
16. egln3 ENSDARG00000032553 280 1.662 0.819 - - - - - - 0.843 - egl-9 family hypoxia-inducible factor 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2541]
17. CDC42EP1 CDC42EP1 50 1.661 0.819 0.842 - - - - - - -
18. CABZ01068473.1 CABZ01068473.1 67 1.657 - 0.751 - - - - - 0.906 -
19. CU694372.1 ENSDARG00000097988 105 1.654 - - - - - - 0.751 0.903 -
20. crfb16 ENSDARG00000075181 40 1.65 - - - - - - 0.751 0.899 - cytokine receptor family member B16 [Source:ZFIN;Acc:ZDB-GENE-071120-9]
21. epor_1 ENSDARG00000090834 366 1.646 - - - 0.795 - - - 0.851 - erythropoietin receptor [Source:ZFIN;Acc:ZDB-GENE-071116-1]
22. ddx41 666 1.643 - - - - - - - 0.712 0.931 DEAD (Asp-Glu-Ala-Asp) box polypeptide 41
23. zgc:173577 ENSDARG00000098923 71 1.642 - - - - - - 0.751 0.891 - zgc:173577 [Source:ZFIN;Acc:ZDB-GENE-071004-55]
24. rbm42 ENSDARG00000039910 1111 1.612 - 0.729 - - - - - - 0.883 RNA binding motif protein 42 [Source:ZFIN;Acc:ZDB-GENE-040809-2]
25. ppm1ba ENSDARG00000001888 319 1.61 - 0.757 - - - - - 0.853 - protein phosphatase, Mg2+/Mn2+ dependent, 1Ba [Source:ZFIN;Acc:ZDB-GENE-991102-16]
26. oprd1b ENSDARG00000037159 21 1.608 - 0.710 - - - - - 0.898 - opioid receptor, delta 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8473]
27. CU459094.3 ENSDARG00000116047 300 1.596 0.789 0.807 - - - - - - -
28. si:dkey-157g20.2 si:dkey-157g20.2 29 1.57 - - - - - 0.819 0.751 - -
29. TNFSF14 ENSDARG00000111357 2 1.57 0.819 - - - - - 0.751 - - TNF superfamily member 14 [Source:ZFIN;Acc:ZDB-GENE-101109-3]
30. nudt4b ENSDARG00000045878 10 1.57 0.819 - - - - - 0.751 - - nudix (nucleoside diphosphate linked moiety X)-type motif 4b [Source:ZFIN;Acc:ZDB-GENE-040912-79]
31. si:dkeyp-67e1.6 ENSDARG00000073947, ENSDARG00000113513, ENSDARG00000113783 20 1.57 0.819 - - - - - 0.751 - - si:dkeyp-67e1.6 [Source:ZFIN;Acc:ZDB-GENE-061207-87]
32. FHDC1_3 FHDC1_3 66 1.567 - 0.816 - - - - 0.751 - -
33. mrps2 ENSDARG00000103198 2410 1.561 - 0.716 - - - - - - 0.845 mitochondrial ribosomal protein S2 [Source:ZFIN;Acc:ZDB-GENE-070112-992]
34. slc4a1a ENSDARG00000012881 8972 1.556 - - - 0.831 - - 0.725 - - solute carrier family 4 (anion exchanger), member 1a (Diego blood group) [Source:ZFIN;Acc:ZDB-GENE-010525-1]
35. NIPAL4 ENSDARG00000059365 597 1.551 - - - 0.777 - - - 0.774 - NIPA like domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040718-412]
36. gata1a ENSDARG00000013477, ENSDARG00000117116 902 1.546 - - 0.748 0.798 - - - - - GATA binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-980526-268]
37. hbbe3 ENSDARG00000038147, ENSDARG00000109344 102871 1.544 - - 0.702 0.842 - - - - - hemoglobin beta embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-980526-287]
38. si:dkey-25o16.2 1990 1.533 - - - - - - 0.808 0.725 - si:dkey-25o16.2, transcript variant X1
39. CKMT2 CKMT2 10 1.529 0.819 0.710 - - - - - - -
40. si:busm1-118j2.5 si:busm1-118j2.5 10462 1.511 - - - 0.756 - - 0.755 - -
41. tmprss13b ENSDARG00000077573 47 1.503 0.752 - - - - - 0.751 - - transmembrane serine protease 13b [Source:ZFIN;Acc:ZDB-GENE-090309-2]
42. RASIP1 ENSDARG00000074829 113 1.489 - - - - - 0.715 0.774 - - Ras interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-120403-3]
43. cttnbp2nl cttnbp2nl 166 1.482 0.731 - - - - - 0.751 - -
44. tek ENSDARG00000028663 167 1.475 - 0.714 - - - - 0.761 - - TEK tyrosine kinase, endothelial [Source:ZFIN;Acc:ZDB-GENE-990415-56]
45. plac8l1 ENSDARG00000069031 161 1.469 - - - 0.718 - - 0.751 - - PLAC8-like 1 [Source:ZFIN;Acc:ZDB-GENE-091204-165]
46. LRRC2 LRRC2 23 1.469 0.718 - - - - - 0.751 - -
47. CT030712.1 ENSDARG00000044355 83 1.469 0.718 - - - - - 0.751 - - uncharacterized LOC100534830 [Source:NCBI gene;Acc:100534830]
48. nt5c2l1 ENSDARG00000034852 1014 1.461 - 0.730 - 0.731 - - - - - 5'-nucleotidase, cytosolic II, like 1 [Source:ZFIN;Acc:ZDB-GENE-031006-8]
49. PEG3_10 PEG3_10 45 1.461 - 0.710 - - - - 0.751 - -
50. MAP1B ENSDARG00000060434, ENSDARG00000113782 1983 1.458 - - - - - - - 0.726 0.732 microtubule-associated protein 1B [Source:ZFIN;Acc:ZDB-GENE-130530-690]
51. AL935210.1 ENSDARG00000088330 24618 1.456 - - - 0.719 - - 0.737 - - hemoglobin, alpha embryonic 1.3 [Source:NCBI gene;Acc:572729]
52. si:ch211-236p5.3 ENSDARG00000086418 138 1.453 - 0.725 - - - - 0.728 - - si:ch211-236p5.3 [Source:ZFIN;Acc:ZDB-GENE-081028-31]
53. SNORA57 SNORA57 148 1.434 - 0.728 - - - - 0.706 - -
54. hif1al2 ENSDARG00000044550 140 1 - - - - - - 1.000 - - hypoxia inducible factor 1 subunit alpha, like 2 [Source:ZFIN;Acc:ZDB-GENE-050211-2]
55. amn1 ENSDARG00000070478, ENSDARG00000111705 72 1 1.000 - - - - - - - - antagonist of mitotic exit network 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060825-13]
56. si:ch211-93g23.2 ENSDARG00000070558 105 0.979 0.979 - - - - - - - - si:ch211-93g23.2 [Source:ZFIN;Acc:ZDB-GENE-090312-164]
57. zfyve16 ENSDARG00000075747 62 0.97 0.970 - - - - - - - - zinc finger, FYVE domain containing 16 [Source:ZFIN;Acc:ZDB-GENE-091116-62]
58. vsig8b ENSDARG00000013685 246 0.97 0.970 - - - - - - - - V-set and immunoglobulin domain containing 8b [Source:ZFIN;Acc:ZDB-GENE-081104-51]
59. tbx6l 87 0.962 0.962 - - - - - - - - T-box 6, like, transcript variant X2
60. sat1b ENSDARG00000032272, ENSDARG00000112956 72 0.962 0.962 - - - - - - - - spermidine/spermine N1-acetyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-041001-39]
61. klhl4 ENSDARG00000016531 47 0.962 0.962 - - - - - - - - kelch-like family member 4 [Source:ZFIN;Acc:ZDB-GENE-070410-63]
62. CU104700.1 CU104700.1 114 0.962 0.962 - - - - - - - -
63. slc12a2 ENSDARG00000104573 59 0.962 0.962 - - - - - - - - solute carrier family 12 (sodium/potassium/chloride transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-040625-53]
64. pmelb ENSDARG00000033760 206 0.962 0.962 - - - - - - - - premelanosome protein b [Source:ZFIN;Acc:ZDB-GENE-050912-2]
65. rxrgb ENSDARG00000004697 332 0.961 - - - - - - - - 0.961 retinoid X receptor, gamma b [Source:ZFIN;Acc:ZDB-GENE-040718-34]
66. hprt1l ENSDARG00000014866 696 0.961 - - - - - - - - 0.961 hypoxanthine phosphoribosyltransferase 1, like [Source:ZFIN;Acc:ZDB-GENE-040625-17]
67. ZNFX1 ENSDARG00000100280 118 0.956 - - - - - - - - 0.956 zinc finger, NFX1-type containing 1 [Source:ZFIN;Acc:ZDB-GENE-110804-2]
68. cdh18 cdh18 64 0.956 0.956 - - - - - - - -
69. KLF8 ENSDARG00000060661 219 0.955 - - - - - - - - 0.955 Kruppel-like factor 8 [Source:ZFIN;Acc:ZDB-GENE-070424-152]
70. CABZ01054405.1 CABZ01054405.1 115 0.953 - - - - - - - - 0.953
71. qser1 ENSDARG00000074750 597 0.953 - - - - - - - - 0.953 glutamine and serine rich 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2978]
72. pif1 ENSDARG00000020289 216 0.953 - - - - - - - - 0.953 PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-4928]
73. flrt1a 107 0.952 - - - - - - - - 0.952 fibronectin leucine rich transmembrane protein 1a, transcript variant X2
74. nupl2 ENSDARG00000029043 105 0.952 - - - - - - - - 0.952 nucleoporin like 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2292]
75. AL929322.1 AL929322.1 300 0.951 - - - - - - - - 0.951
76. ncam2 ENSDARG00000017466 175 0.95 - - - - - - - - 0.950 neural cell adhesion molecule 2 [Source:ZFIN;Acc:ZDB-GENE-010822-1]
77. zgc:173480 171 0.95 - - - - - - - - 0.950 zgc:173480
78. si:dkey-153k10.9 ENSDARG00000004386, ENSDARG00000109564, ENSDARG00000111507 319 0.95 - - - - - - - - 0.950 si:dkey-153k10.9 [Source:ZFIN;Acc:ZDB-GENE-030131-3893]
79. nsun2 ENSDARG00000056665 740 0.949 - - - - - - - - 0.949 NOP2/Sun RNA methyltransferase family, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4017]
80. si:ch211-133l11.10 ENSDARG00000005626 381 0.948 - - - - - - - - 0.948 si:ch211-133l11.10 [Source:ZFIN;Acc:ZDB-GENE-141219-14]
81. si:dkey-156k2.6 si:dkey-156k2.6 848 0.948 - - - - - - - - 0.948
82. ube3d ENSDARG00000026178 244 0.948 - - - - - - - - 0.948 ubiquitin protein ligase E3D [Source:ZFIN;Acc:ZDB-GENE-091218-3]
83. slc25a43 ENSDARG00000102048 489 0.947 - - - - - - - - 0.947 solute carrier family 25, member 43 [Source:ZFIN;Acc:ZDB-GENE-030616-69]
84. ttc21b ENSDARG00000012368 229 0.947 - - - - - - - - 0.947 tetratricopeptide repeat domain 21B [Source:ZFIN;Acc:ZDB-GENE-031010-34]
85. abcg1 ENSDARG00000063475 97 0.947 - - - - - - - - 0.947 ATP-binding cassette, sub-family G (WHITE), member 1 [Source:ZFIN;Acc:ZDB-GENE-070424-84]
86. CTIF ENSDARG00000090617 270 0.946 - - - - - - - - 0.946 CBP80/20-dependent translation initiation factor [Source:ZFIN;Acc:ZDB-GENE-130530-1003]
87. rbm45 ENSDARG00000063731 504 0.946 - - - - - - - - 0.946 RNA binding motif protein 45 [Source:ZFIN;Acc:ZDB-GENE-070122-4]
88. ltc4s ENSDARG00000062598 138 0.946 - - - - - - - - 0.946 leukotriene C4 synthase [Source:ZFIN;Acc:ZDB-GENE-110411-32]
89. AKAP12 AKAP12 140 0.946 - - - - - - - - 0.946
90. cenpk ENSDARG00000039616 744 0.946 - - - - - - - - 0.946 centromere protein K [Source:ZFIN;Acc:ZDB-GENE-090313-204]
91. ptn ENSDARG00000102340 229 0.946 - - - - - - - - 0.946 pleiotrophin [Source:ZFIN;Acc:ZDB-GENE-030624-1]
92. rab11fip3 ENSDARG00000016490 661 0.946 - - - - - - - - 0.946 RAB11 family interacting protein 3 (class II) [Source:ZFIN;Acc:ZDB-GENE-040724-138]
93. hck ENSDARG00000058647 318 0.945 - - - - - - - - 0.945 HCK proto-oncogene, Src family tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-090313-72]
94. dkk3b ENSDARG00000070683 209 0.945 - - - - - - - - 0.945 dickkopf WNT signaling pathway inhibitor 3b [Source:ZFIN;Acc:ZDB-GENE-061207-74]
95. vcp ENSDARG00000020008, ENSDARG00000116074 2284 0.945 - - - - - - - - 0.945 valosin containing protein [Source:ZFIN;Acc:ZDB-GENE-030131-5408]
96. ncoa6 ENSDARG00000071272 759 0.945 - - - - - - - - 0.945 nuclear receptor coactivator 6 [Source:ZFIN;Acc:ZDB-GENE-080403-12]
97. gpr143 ENSDARG00000034572 559 0.945 - - - - - - - - 0.945 G protein-coupled receptor 143 [Source:ZFIN;Acc:ZDB-GENE-040426-1476]
98. wnt2bb ENSDARG00000032234, ENSDARG00000110703 273 0.945 - - - - - - - - 0.945 wingless-type MMTV integration site family, member 2Bb [Source:ZFIN;Acc:ZDB-GENE-060824-6]
99. ror1 ENSDARG00000015176 378 0.945 - - - - - - - - 0.945 receptor tyrosine kinase-like orphan receptor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6104]
100. ZNF518B 475 0.944 - - - - - - - - 0.944 zinc finger protein 518B

There are 1599 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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