Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for tuba1c

Gene Name Gene ID Reads Annotation
tuba1c ENSDARG00000055216 8384 tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]










Genes with expression patterns similar to tuba1c

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tuba1c ENSDARG00000055216 8384 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
2. tox ENSDARG00000032317 9126 5.561 0.916 - 0.928 0.992 - 0.884 0.952 - 0.889 thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
3. gap43 ENSDARG00000099744 4114 5.434 0.912 - - 0.988 - 0.982 0.965 0.723 0.864 growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
4. her4.1 ENSDARG00000056732 1264 4.968 0.795 - - - 0.793 0.974 0.878 0.725 0.803 hairy-related 4, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-980526-521]
5. nova2 ENSDARG00000017673 7685 4.661 0.970 - 0.910 - - 0.952 0.962 - 0.867 neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
6. plp1a ENSDARG00000103732 3544 4.585 0.982 - 0.937 - - 0.909 0.959 - 0.798 proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
7. mllt11 ENSDARG00000071026 2518 4.488 0.950 - - - - 0.984 0.929 0.797 0.828 MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
8. AGO1 ENSDARG00000092644 4521 4.464 0.937 - - 0.989 - 0.881 0.946 - 0.711 argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
9. dpysl5a ENSDARG00000011141 1827 4.439 0.884 - - - 0.738 0.934 0.980 - 0.903 dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
10. nbeaa ENSDARG00000070080 862 4.374 0.895 - - - 0.779 0.878 0.974 - 0.848 neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
11. si:ch73-21g5.7 ENSDARG00000093156 9412 4.335 0.930 - - - - 0.882 0.980 0.739 0.804 si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
12. mbd3b ENSDARG00000042029, ENSDARG00000061810 4561 4.303 0.878 - - - 0.758 0.969 0.849 - 0.849 methyl-CpG binding domain protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9792]
13. hmgb3a ENSDARG00000056725 15668 4.274 0.883 - - - 0.734 0.922 0.843 - 0.892 high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
14. hmp19 2554 4.255 0.894 - - - 0.706 0.938 0.947 - 0.770 HMP19 protein
15. cspg5a ENSDARG00000069981 1699 4.187 0.856 - - - 0.723 0.816 0.967 - 0.825 chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
16. fez1 ENSDARG00000023174 701 4.157 0.846 - - - - 0.897 0.870 0.729 0.815 fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]
17. fzd3a ENSDARG00000021664 1958 4.148 0.880 - - - 0.742 0.823 0.873 - 0.830 frizzled class receptor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-225]
18. C8H1orf106 C8H1orf106 2690 4.077 0.901 - - - 0.726 0.806 0.882 - 0.762
19. hnrnpub ENSDARG00000004735 16496 4.043 0.789 - - - - 0.828 0.835 0.702 0.889 heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
20. fam60al 2846 4.027 0.786 - - - 0.764 0.863 0.829 - 0.785 family with sequence similarity 60, member A, like
21. zgc:109889 ENSDARG00000069600, ENSDARG00000113538 554 3.993 0.716 - - - - 0.878 0.850 0.726 0.823 zgc:109889 [Source:ZFIN;Acc:ZDB-GENE-050522-547]
22. cd99l2 ENSDARG00000056722 5036 3.953 0.716 - 0.881 - 0.719 0.873 0.764 - - CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
23. pou3f2a ENSDARG00000070220 817 3.945 - - - - 0.729 0.738 0.916 0.716 0.846 POU class 3 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-139]
24. her4.3 ENSDARG00000070770 613 3.924 0.703 - - - - 0.781 0.927 0.706 0.807 hairy-related 4, tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-081030-7]
25. dpysl3 ENSDARG00000002587 4381 3.783 0.926 - - - - 0.954 0.985 - 0.918 dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
26. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 3.666 0.925 - - - - 0.906 0.975 - 0.860 cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
27. stmn1b ENSDARG00000033655 9491 3.651 0.932 - - - - 0.894 0.972 - 0.853 stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
28. hmgb1b ENSDARG00000030479 10398 3.64 0.819 - - 0.991 - 0.899 0.931 - - high mobility group box 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8480]
29. myt1b ENSDARG00000102879 5411 3.635 0.849 - - - - 0.961 0.951 - 0.874 myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
30. gpm6aa ENSDARG00000055455, ENSDARG00000110942 9156 3.635 0.889 - - - 0.826 - 0.975 - 0.945 glycoprotein M6Aa [Source:ZFIN;Acc:ZDB-GENE-030710-7]
31. nrarpb ENSDARG00000018958 6225 3.63 0.899 - - - - 0.954 0.969 - 0.808 NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
32. dbx2 2971 3.62 0.866 - 0.941 - - 0.823 0.990 - - developing brain homeobox 2
33. nadl1.1 1200 3.6 0.915 - - - - 0.950 0.969 - 0.766 neural adhesion molecule L1.1, transcript variant X1
34. tmem35 ENSDARG00000052567 5685 3.599 0.905 - - - - 0.851 0.943 - 0.900 transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
35. nes ENSDARG00000088805 2710 3.597 0.956 - - - 0.792 0.897 0.952 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
36. s1pr1 ENSDARG00000042690, ENSDARG00000113842, ENSDARG00000116038 2510 3.583 0.899 - 0.927 - - 0.900 0.857 - - sphingosine-1-phosphate receptor 1 [Source:ZFIN;Acc:ZDB-GENE-001228-2]
37. lhx1a ENSDARG00000014018 958 3.574 0.896 - - - - 0.887 0.953 - 0.838 LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
38. Sep-03 Sep-03 1124 3.546 0.836 - - - - 0.967 0.891 - 0.852
39. lrrn1 ENSDARG00000060115, ENSDARG00000115960 5175 3.536 0.937 - - - - - 0.977 0.728 0.894 leucine rich repeat neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-071126-1]
40. CABZ01111990.1 CABZ01111990.1 4374 3.533 0.925 - - - - 0.831 0.976 - 0.801
41. cadm3 ENSDARG00000057013 1545 3.53 0.776 - - - - 0.991 0.949 - 0.814 cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
42. atp6v0cb ENSDARG00000036577 3472 3.528 0.861 - - - - 0.967 0.983 - 0.717 ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
43. SPOCK1 ENSDARG00000074644 794 3.52 0.901 - - - - 0.922 0.979 - 0.718 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
44. lfng ENSDARG00000037879 11783 3.503 0.921 - 0.770 - - 0.938 - - 0.874 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-980605-16]
45. arnt2 ENSDARG00000103697 5731 3.499 - 0.998 - - - 0.847 0.766 - 0.888 aryl-hydrocarbon receptor nuclear translocator 2 [Source:ZFIN;Acc:ZDB-GENE-001207-3]
46. nova1 ENSDARG00000020178 4129 3.497 - - 0.747 - 0.788 0.989 0.973 - - neuro-oncological ventral antigen 1 [Source:ZFIN;Acc:ZDB-GENE-060526-113]
47. dnajc5aa ENSDARG00000042948 2885 3.492 0.856 - - - - 0.924 0.961 - 0.751 DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
48. si:ch211-11c15.3 si:ch211-11c15.3 1279 3.485 - - - - - 0.971 0.940 0.777 0.797
49. negr1 ENSDARG00000021607 1051 3.473 0.891 - - - - 0.885 0.879 - 0.818 neuronal growth regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040822-27]
50. mapk12b ENSDARG00000006409 2246 3.467 0.901 - - - 0.703 0.885 0.978 - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
51. TUBA1A ENSDARG00000001889 25294 3.457 0.808 - - - - 0.973 0.971 0.705 - tubulin, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090507-4]
52. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 3.454 0.789 - - - - 0.963 0.857 - 0.845 dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
53. metrn ENSDARG00000030367, ENSDARG00000112407, ENSDARG00000115842 7032 3.452 0.747 - 0.943 - - 0.861 0.901 - - meteorin, glial cell differentiation regulator [Source:ZFIN;Acc:ZDB-GENE-050102-1]
54. msi1 ENSDARG00000010710 2634 3.444 0.751 - - - - 0.931 0.983 - 0.779 musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
55. lhx5 ENSDARG00000057936 785 3.444 0.784 - - - - 0.934 0.962 0.764 - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
56. dbx1a ENSDARG00000086393 3161 3.443 0.729 - 0.950 - - 0.836 0.928 - - developing brain homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-000128-8]
57. C7H4orf48 C7H4orf48 1455 3.439 0.836 - - - - 0.951 0.903 0.749 -
58. rtn1b ENSDARG00000021143 1682 3.413 0.819 - - - - 0.953 0.881 - 0.760 reticulon 1b [Source:ZFIN;Acc:ZDB-GENE-030710-3]
59. cntnap2b ENSDARG00000074558, ENSDARG00000109616, ENSDARG00000116850 559 3.388 - - - - - 0.928 0.909 0.752 0.799 contactin associated protein like 2b [Source:NCBI gene;Acc:563345]
60. rap2ip rap2ip 681 3.386 0.705 - - - - 0.931 0.938 - 0.812
61. tuba2 ENSDARG00000045014 1490 3.384 0.755 - - - - 0.878 0.915 - 0.836 tubulin, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1970]
62. st18 663 3.379 - - - - - 0.935 0.928 0.713 0.803 suppression of tumorigenicity 18, zinc finger
63. ADAM22 ENSDARG00000060532 2259 3.377 - - - - - 0.880 0.954 0.718 0.825 ADAM metallopeptidase domain 22 [Source:ZFIN;Acc:ZDB-GENE-070810-1]
64. slc17a6b ENSDARG00000041150 823 3.366 0.784 - - - - 0.899 0.946 - 0.737 solute carrier family 17 (vesicular glutamate transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030616-554]
65. adcyap1b ENSDARG00000027740 1539 3.355 0.857 - - - - 0.957 0.833 0.708 - adenylate cyclase activating polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-041010-89]
66. lgi1a ENSDARG00000020493 1218 3.35 0.747 - 0.897 - - 0.889 0.817 - - leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
67. elavl4 ENSDARG00000045639 998 3.347 0.740 - - - - 0.814 0.985 - 0.808 ELAV like neuron-specific RNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-990415-246]
68. appb ENSDARG00000055543, ENSDARG00000109552 4461 3.333 0.718 - 0.917 - - 0.862 0.836 - - amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
69. nhlh2 ENSDARG00000025495 1860 3.332 0.795 - - - - 0.807 0.952 - 0.778 nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
70. cnrip1a ENSDARG00000091683 1491 3.332 0.791 - - - - 0.818 0.979 0.744 - cannabinoid receptor interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-126]
71. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 3.331 0.713 - - - - 0.823 0.900 - 0.895 hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
72. pkib ENSDARG00000053110 527 3.328 0.782 - 0.875 - - 0.783 0.888 - - protein kinase (cAMP-dependent, catalytic) inhibitor beta [Source:ZFIN;Acc:ZDB-GENE-041014-312]
73. celf3a ENSDARG00000034668 2432 3.316 - - - - - 0.963 0.705 0.732 0.916 cugbp, Elav-like family member 3a [Source:ZFIN;Acc:ZDB-GENE-000501-2]
74. tmpob ENSDARG00000022978 8121 3.313 0.740 - - - - 0.799 0.869 - 0.905 thymopoietin b [Source:ZFIN;Acc:ZDB-GENE-050522-8]
75. mdkb ENSDARG00000020708 5393 3.311 0.835 - - - - 0.912 0.845 - 0.719 midkine b [Source:ZFIN;Acc:ZDB-GENE-010131-6]
76. sox2 ENSDARG00000070913 2763 3.31 0.948 - - - 0.722 0.716 0.924 - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
77. ctnnd2b ENSDARG00000003779 964 3.307 0.877 - - - - 0.754 0.950 - 0.726 catenin (cadherin-associated protein), delta 2b [Source:ZFIN;Acc:ZDB-GENE-070912-532]
78. vezf1a ENSDARG00000008247 1449 3.3 - - - - 0.765 0.900 0.828 - 0.807 vascular endothelial zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-040108-4]
79. vdac1 ENSDARG00000045132 8051 3.299 0.847 - 0.918 - - 0.812 - - 0.722 voltage-dependent anion channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6514]
80. CLIP3 ENSDARG00000054456 734 3.288 0.866 - - - - 0.745 0.946 - 0.731 CAP-GLY domain containing linker protein 3 [Source:ZFIN;Acc:ZDB-GENE-131127-193]
81. adarb1a ENSDARG00000041609 476 3.285 0.817 - - - - 0.777 0.970 - 0.721 adenosine deaminase, RNA-specific, B1a [Source:ZFIN;Acc:ZDB-GENE-000627-2]
82. csdc2a ENSDARG00000041323, ENSDARG00000115932 490 3.282 - - - - - 0.877 0.886 0.700 0.819 cold shock domain containing C2, RNA binding a [Source:ZFIN;Acc:ZDB-GENE-040718-442]
83. slc35g2b ENSDARG00000045447 378 3.282 0.836 - - - - 0.781 0.956 - 0.709 solute carrier family 35, member G2b [Source:ZFIN;Acc:ZDB-GENE-050320-142]
84. dpysl4 ENSDARG00000103490 534 3.256 0.774 - - - 0.714 - 0.967 - 0.801 dihydropyrimidinase-like 4 [Source:ZFIN;Acc:ZDB-GENE-050720-3]
85. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 3.256 0.747 - - - 0.745 0.847 0.917 - - POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
86. dync1i1 ENSDARG00000060948 554 3.256 0.766 - - - - 0.801 0.888 - 0.801 dynein, cytoplasmic 1, intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-061215-62]
87. tmsb ENSDARG00000054911 6411 3.249 0.703 - - - - 0.868 0.818 - 0.860 thymosin, beta [Source:ZFIN;Acc:ZDB-GENE-050307-5]
88. CABZ01072954.1 CABZ01072954.1 2330 3.242 0.789 - 0.922 - - 0.820 0.711 - -
89. nrxn2a ENSDARG00000061454 291 3.219 0.806 - - - - 0.749 0.893 - 0.771 neurexin 2a [Source:ZFIN;Acc:ZDB-GENE-070206-5]
90. APBB3 ENSDARG00000053771 654 3.208 0.774 - - - - 0.751 0.980 - 0.703 amyloid beta (A4) precursor protein-binding, family B, member 3 [Source:ZFIN;Acc:ZDB-GENE-140106-53]
91. PPP2R5B ENSDARG00000054931 213 3.202 0.871 - - - - 0.714 0.878 - 0.739 protein phosphatase 2, regulatory subunit B', beta [Source:ZFIN;Acc:ZDB-GENE-101208-1]
92. si:ch211-152f6.6 si:ch211-152f6.6 278 3.19 0.894 - - - - 0.731 0.848 - 0.717
93. slc6a1b ENSDARG00000039647 1301 3.18 0.805 - - - - 0.780 0.853 - 0.742 solute carrier family 6 (neurotransmitter transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-041114-57]
94. npm1b ENSDARG00000037675 5448 3.179 0.764 - 0.874 - - 0.836 - - 0.705 nucleophosmin 1b [Source:ZFIN;Acc:ZDB-GENE-080723-7]
95. rcor2 ENSDARG00000008278 1678 3.176 - - - - 0.780 0.904 0.741 0.751 - REST corepressor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1812]
96. hnrnpa0b ENSDARG00000036162, ENSDARG00000112653 27740 3.174 - - 0.808 - - 0.755 - 0.720 0.891 heterogeneous nuclear ribonucleoprotein A0b [Source:ZFIN;Acc:ZDB-GENE-030131-6154]
97. ptbp2b ENSDARG00000015901 2458 3.172 0.727 - - - - 0.817 0.820 - 0.808 polypyrimidine tract binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-060810-49]
98. camsap2 camsap2 1448 3.164 - - - 0.989 - 0.704 0.765 - 0.706
99. fabp7a ENSDARG00000007697 5211 3.158 0.750 - - - 0.805 - 0.794 - 0.809 fatty acid binding protein 7, brain, a [Source:ZFIN;Acc:ZDB-GENE-000627-1]
100. wu:fb17g07 wu:fb17g07 10567 3.155 0.752 - 0.929 - - 0.720 - - 0.754

There are 2497 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA