Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for tuba1b

Gene Name Gene ID Reads Annotation
tuba1b ENSDARG00000045367 8485 tubulin, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030822-1]










Genes with expression patterns similar to tuba1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tuba1b ENSDARG00000045367 8485 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 tubulin, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-030822-1]
2. stag2b ENSDARG00000053668, ENSDARG00000109728 7193 3.209 - 0.715 - 0.713 - 0.981 0.800 - - stromal antigen 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2785]
3. Sep-06 Sep-06 5465 2.561 - 0.781 - - - 0.991 0.789 - -
4. eif4bb ENSDARG00000010194, ENSDARG00000112432 12555 2.483 - 0.765 - - - 0.990 0.728 - - eukaryotic translation initiation factor 4Bb [Source:ZFIN;Acc:ZDB-GENE-030131-8563]
5. pfn2l ENSDARG00000012682 21690 2.452 - - - - - 0.716 0.770 - 0.966 profilin 2 like [Source:ZFIN;Acc:ZDB-GENE-030131-34]
6. LENG8 ENSDARG00000076805, ENSDARG00000113326 4021 2.438 - 0.765 - - - - 0.706 - 0.967 leukocyte receptor cluster (LRC) member 8 [Source:ZFIN;Acc:ZDB-GENE-070410-6]
7. SSBP4 ENSDARG00000056483 5156 2.433 - 0.737 - - 0.702 - - - 0.994 single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
8. tmem106bb ENSDARG00000035949, ENSDARG00000113700 1415 2.407 - 0.712 - - - 0.994 0.701 - - transmembrane protein 106Bb [Source:ZFIN;Acc:ZDB-GENE-050913-37]
9. hells ENSDARG00000057738, ENSDARG00000112932, ENSDARG00000116012 1443 2.403 - - - 0.786 0.770 - 0.847 - - helicase, lymphoid specific [Source:ZFIN;Acc:ZDB-GENE-030131-9923]
10. srsf6b ENSDARG00000016783 9926 2.233 - - - 0.716 0.776 - 0.741 - - serine/arginine-rich splicing factor 6b [Source:ZFIN;Acc:ZDB-GENE-041219-1]
11. myef2 ENSDARG00000059398 6050 2.21 - 0.752 - - 0.720 - 0.738 - - myelin expression factor 2 [Source:ZFIN;Acc:ZDB-GENE-051120-114]
12. lypla2 ENSDARG00000053656 8971 2.193 - 0.733 - - 0.722 - 0.738 - - lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
13. smc4 ENSDARG00000038882 4373 2.166 - 0.733 0.728 0.705 - - - - - structural maintenance of chromosomes 4 [Source:ZFIN;Acc:ZDB-GENE-020419-21]
14. prkab1b ENSDARG00000046143 8640 1.968 - - - - - 0.984 - - 0.984 protein kinase, AMP-activated, beta 1 non-catalytic subunit, b [Source:ZFIN;Acc:ZDB-GENE-030131-7172]
15. ube2a ENSDARG00000098466 12765 1.853 - - - - - 0.871 - - 0.982 ubiquitin-conjugating enzyme E2A (RAD6 homolog) [Source:ZFIN;Acc:ZDB-GENE-030616-72]
16. acin1a ENSDARG00000054290 14023 1.82 - - - - - 0.972 0.848 - - apoptotic chromatin condensation inducer 1a [Source:ZFIN;Acc:ZDB-GENE-030616-583]
17. HOMER2 ENSDARG00000059349 2264 1.78 - 0.788 - - - 0.992 - - - homer scaffold protein 2 [Source:ZFIN;Acc:ZDB-GENE-050522-417]
18. slc25a12 ENSDARG00000102362 2773 1.756 - 0.765 - - - 0.991 - - - solute carrier family 25 (aspartate/glutamate carrier), member 12 [Source:ZFIN;Acc:ZDB-GENE-031006-11]
19. hnrnpm ENSDARG00000061735 19428 1.744 - - - 0.779 - 0.965 - - - heterogeneous nuclear ribonucleoprotein M [Source:ZFIN;Acc:ZDB-GENE-030131-6898]
20. Sep-02 Sep-02 10074 1.739 - - - - - - 0.769 - 0.970
21. stat5.1 stat5.1 3337 1.731 - 0.753 - - - - - - 0.978
22. hadhb ENSDARG00000102055 9700 1.723 - - - - - 0.961 0.762 - - hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta [Source:ZFIN;Acc:ZDB-GENE-030131-8550]
23. timm8b ENSDARG00000055708 7291 1.721 - 0.762 - - - 0.959 - - - translocase of inner mitochondrial membrane 8 homolog B (yeast) [Source:ZFIN;Acc:ZDB-GENE-031019-1]
24. glrx3 ENSDARG00000098785 4138 1.712 - - - - - - 0.725 - 0.987 glutaredoxin 3 [Source:ZFIN;Acc:ZDB-GENE-041010-22]
25. rorca ENSDARG00000057231, ENSDARG00000111082 894 1.707 - - - - - 0.992 0.715 - - RAR-related orphan receptor C a [Source:ZFIN;Acc:ZDB-GENE-990415-250]
26. GIGYF1 1830 1.705 - 0.712 - - - 0.993 - - - GRB10 interacting GYF protein 1, transcript variant X6
27. grip1 ENSDARG00000015053 1275 1.703 - 0.708 - - - 0.995 - - - glutamate receptor interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-041210-125]
28. emp2 ENSDARG00000044588 12560 1.702 - - - - - 0.962 0.740 - - epithelial membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-040822-24]
29. FAM210B ENSDARG00000052638 1755 1.699 - 0.716 - - - - - - 0.983 family with sequence similarity 210, member B [Source:ZFIN;Acc:ZDB-GENE-050913-122]
30. ENDOD1_5 ENDOD1_5 8723 1.693 - 0.707 - - - - - - 0.986
31. cx43.4 ENSDARG00000007099 16369 1.685 - 0.721 - - - - - - 0.964 connexin 43.4 [Source:ZFIN;Acc:ZDB-GENE-990415-38]
32. puf60a ENSDARG00000032175 5618 1.664 - 0.829 - - - - 0.835 - - poly-U binding splicing factor a [Source:ZFIN;Acc:ZDB-GENE-030131-2891]
33. hnrpdl 14288 1.66 - - - - 0.727 - - - 0.933 heterogeneous nuclear ribonucleoprotein D-like, transcript variant X2
34. h3f3d ENSDARG00000045248 43757 1.64 - - - 0.815 - - - - 0.825 H3 histone, family 3D [Source:ZFIN;Acc:ZDB-GENE-040426-1023]
35. pl10 pl10 10795 1.63 - 0.828 - - - - 0.802 - -
36. kpna3 ENSDARG00000052641 5347 1.627 - 0.878 - - - - 0.749 - - karyopherin alpha 3 (importin alpha 4) [Source:ZFIN;Acc:ZDB-GENE-030616-541]
37. lbr ENSDARG00000014013 4835 1.624 - - - - 0.804 - 0.820 - - lamin B receptor [Source:ZFIN;Acc:ZDB-GENE-030804-11]
38. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 1.622 - - - 0.846 - - 0.776 - - splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
39. prmt1 ENSDARG00000010246 11311 1.617 - 0.777 - - - - 0.840 - - protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
40. srgap2a srgap2a 7197 1.613 - 0.843 - - - - 0.770 - -
41. azin1b ENSDARG00000035869, ENSDARG00000115647 9761 1.611 - 0.747 - - - 0.864 - - - antizyme inhibitor 1b [Source:ZFIN;Acc:ZDB-GENE-030121-1]
42. smarcd1 ENSDARG00000019004 6028 1.61 - - - 0.775 0.835 - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1835]
43. papola ENSDARG00000009585 9567 1.608 - 0.790 - - - - 0.818 - - poly(A) polymerase alpha [Source:ZFIN;Acc:ZDB-GENE-030131-3507]
44. isoc2 ENSDARG00000013371 1378 1.606 - 0.732 - - - - 0.874 - - isochorismatase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070518-1]
45. ash2l ENSDARG00000060392 4916 1.603 - - - 0.761 - - 0.842 - - ash2 like, histone lysine methyltransferase complex subunit [Source:ZFIN;Acc:ZDB-GENE-030131-494]
46. PYURF ENSDARG00000045773 4576 1.59 - 0.792 - - - - 0.798 - - PIGY upstream reading frame [Source:HGNC Symbol;Acc:HGNC:44317]
47. syncrip ENSDARG00000040184 24690 1.586 - - - - - 0.863 - 0.723 - synaptotagmin binding, cytoplasmic RNA interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-4862]
48. carm1 ENSDARG00000018698 5599 1.582 - 0.838 - - 0.744 - - - - coactivator-associated arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040724-77]
49. grpel2 ENSDARG00000069421 5673 1.58 - 0.720 - - - 0.860 - - - GrpE-like 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-091204-188]
50. puf60b ENSDARG00000001241 13827 1.56 - 0.740 - 0.820 - - - - - poly-U binding splicing factor b [Source:ZFIN;Acc:ZDB-GENE-040625-116]
51. ppig ENSDARG00000044431 3427 1.559 - 0.770 - - - - 0.789 - - peptidylprolyl isomerase G (cyclophilin G) [Source:ZFIN;Acc:ZDB-GENE-040426-2822]
52. hoxd10a ENSDARG00000057859 1498 1.557 - 0.819 - - - - 0.738 - - homeobox D10a [Source:ZFIN;Acc:ZDB-GENE-990415-116]
53. pa2g4b ENSDARG00000070657 7999 1.555 - 0.795 - - - - 0.760 - - proliferation-associated 2G4, b [Source:ZFIN;Acc:ZDB-GENE-030131-2182]
54. ppp2r1a ppp2r1a 11291 1.554 - 0.777 - - - - 0.777 - -
55. HNRNPAB HNRNPAB 22267 1.554 - - 0.725 - - - 0.829 - -
56. prpf8 ENSDARG00000026180 7026 1.551 - 0.812 - - 0.739 - - - - pre-mRNA processing factor 8 [Source:ZFIN;Acc:ZDB-GENE-030131-577]
57. HYAL2 HYAL2 936 1.548 - 0.752 - - - - 0.796 - -
58. sdc4 ENSDARG00000059906 10105 1.538 - 0.761 - - - - 0.777 - - syndecan 4 [Source:ZFIN;Acc:ZDB-GENE-061111-1]
59. emc2 ENSDARG00000003308, ENSDARG00000114541 7141 1.538 - 0.838 - - - - 0.700 - - ER membrane protein complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040625-82]
60. med25 ENSDARG00000038005, ENSDARG00000115713 1305 1.536 - 0.718 - - - - 0.818 - - mediator complex subunit 25 [Source:ZFIN;Acc:ZDB-GENE-040426-2850]
61. GABARAP GABARAP 8341 1.532 - 0.722 - - - - 0.810 - -
62. srsf4 ENSDARG00000105293 9657 1.53 - 0.724 - - - - 0.806 - - serine/arginine-rich splicing factor 4 [Source:ZFIN;Acc:ZDB-GENE-030131-591]
63. akt1s1 ENSDARG00000074667 3795 1.53 - 0.823 - - - - 0.707 - - AKT1 substrate 1 (proline-rich) [Source:ZFIN;Acc:ZDB-GENE-030131-482]
64. asap1a ENSDARG00000029463 1566 1.524 - 0.705 - - - - 0.819 - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 1a [Source:ZFIN;Acc:ZDB-GENE-070912-129]
65. uba52 ENSDARG00000041435 50415 1.521 - - - - - - 0.702 - 0.819 ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:ZFIN;Acc:ZDB-GENE-051023-7]
66. timm9 ENSDARG00000043865 2456 1.511 - 0.791 - - - - 0.720 - - translocase of inner mitochondrial membrane 9 homolog [Source:ZFIN;Acc:ZDB-GENE-021206-14]
67. tia1l ENSDARG00000026476, ENSDARG00000109827 9378 1.509 - 0.732 - 0.777 - - - - - cytotoxic granule-associated RNA binding protein 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-2167]
68. nr2f2 ENSDARG00000040926 5213 1.509 - - - - 0.707 - 0.802 - - nuclear receptor subfamily 2, group F, member 2 [Source:ZFIN;Acc:ZDB-GENE-990415-252]
69. meaf6 ENSDARG00000101216 6865 1.509 - - - - 0.798 - 0.711 - - MYST/Esa1-associated factor 6 [Source:ZFIN;Acc:ZDB-GENE-040808-12]
70. nup188 ENSDARG00000030022 2398 1.504 - 0.725 - - - - 0.779 - - nucleoporin 188 [Source:ZFIN;Acc:ZDB-GENE-030131-7184]
71. tuba8l ENSDARG00000042708 48551 1.501 - - - - - 0.779 - 0.722 - tubulin, alpha 8 like [Source:ZFIN;Acc:ZDB-GENE-030131-9167]
72. celf2 ENSDARG00000002131, ENSDARG00000110267 15605 1.501 - 0.750 - - - - 0.751 - - cugbp, Elav-like family member 2 [Source:ZFIN;Acc:ZDB-GENE-030826-35]
73. ppm1g ENSDARG00000075559 6516 1.501 - 0.716 - 0.785 - - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1G [Source:ZFIN;Acc:ZDB-GENE-030425-4]
74. si:ch211-198a12.6 ENSDARG00000074624, ENSDARG00000114808 8911 1.491 - 0.791 - 0.700 - - - - - si:ch211-198a12.6 [Source:ZFIN;Acc:ZDB-GENE-030131-1683]
75. ube2g1a ENSDARG00000015292, ENSDARG00000112281 3207 1.491 - 0.737 - - - - 0.754 - - ubiquitin-conjugating enzyme E2G 1a (UBC7 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-6065]
76. ilk ENSDARG00000056964 6686 1.488 - 0.770 - - - - 0.718 - - integrin-linked kinase [Source:ZFIN;Acc:ZDB-GENE-040426-1435]
77. uba1 ENSDARG00000037559 11579 1.485 - - - - 0.770 - 0.715 - - ubiquitin-like modifier activating enzyme 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2009]
78. kpnb3 ENSDARG00000040245 7967 1.485 - 0.769 - - - - 0.716 - - karyopherin (importin) beta 3 [Source:ZFIN;Acc:ZDB-GENE-030424-2]
79. ptbp1a ENSDARG00000019362 6290 1.483 - 0.758 - - - - - 0.725 - polypyrimidine tract binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050522-492]
80. top1l ENSDARG00000070545 40529 1.482 - - - 0.726 - - 0.756 - - DNA topoisomerase I, like [Source:ZFIN;Acc:ZDB-GENE-060616-217]
81. hist2h2l ENSDARG00000068996, ENSDARG00000112150 10411 1.478 - 0.755 - - - - 0.723 - - histone 2, H2, like [Source:ZFIN;Acc:ZDB-GENE-031118-36]
82. arl14ep ENSDARG00000001210 3029 1.474 - - - 0.738 - - 0.736 - - ADP-ribosylation factor-like 14 effector protein [Source:ZFIN;Acc:ZDB-GENE-060825-216]
83. tpx2 ENSDARG00000078654 8120 1.469 - - - - 0.746 - 0.723 - - TPX2, microtubule-associated, homolog (Xenopus laevis) [Source:ZFIN;Acc:ZDB-GENE-030131-9652]
84. tgif1 ENSDARG00000059337 4020 1.468 - 0.748 - - - - 0.720 - - TGFB-induced factor homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030131-475]
85. gnaia ENSDARG00000044760, ENSDARG00000109225 2062 1.466 - 0.703 - - - - 0.763 - - guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide a [Source:ZFIN;Acc:ZDB-GENE-030131-2229]
86. wdr5 ENSDARG00000016903 4834 1.463 - - 0.708 - 0.755 - - - - WD repeat domain 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2082]
87. zc3h13 ENSDARG00000037177, ENSDARG00000113331 2662 1.459 - 0.719 - - - - 0.740 - - zinc finger CCCH-type containing 13 [Source:ZFIN;Acc:ZDB-GENE-040426-1619]
88. TAF15 ENSDARG00000070019 5102 1.456 - - - 0.735 0.721 - - - - TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-061215-102]
89. rpf2 ENSDARG00000043960 2719 1.452 - 0.733 - - - - 0.719 - - ribosome production factor 2 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2501]
90. SNRPG ENSDARG00000099667 18697 1.45 - 0.720 - - - - 0.730 - - small nuclear ribonucleoprotein polypeptide G [Source:ZFIN;Acc:ZDB-GENE-040912-105]
91. mn1b ENSDARG00000079248 882 1.449 - 0.710 - - - - 0.739 - - meningioma 1b [Source:ZFIN;Acc:ZDB-GENE-080917-23]
92. tada3l ENSDARG00000058220, ENSDARG00000113214, ENSDARG00000115305 2257 1.444 - 0.713 - - - - 0.731 - - transcriptional adaptor 3 (NGG1 homolog, yeast)-like [Source:ZFIN;Acc:ZDB-GENE-030131-6725]
93. sumo3a ENSDARG00000028119 13447 1.443 - - - 0.719 - - 0.724 - - small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
94. IWS1 2428 1.443 - - - - 0.709 - 0.734 - - IWS1, SUPT6H interacting protein, transcript variant X2
95. trrap ENSDARG00000100623 3429 1.44 - 0.704 - - - - 0.736 - - transformation/transcription domain-associated protein [Source:ZFIN;Acc:ZDB-GENE-050809-47]
96. itpkca ENSDARG00000002994 710 1.434 - 0.706 - - - - 0.728 - - inositol-trisphosphate 3-kinase Ca [Source:ZFIN;Acc:ZDB-GENE-030131-6009]
97. eif3ja ENSDARG00000012603 6324 1.417 - 0.710 - - - - - 0.707 - eukaryotic translation initiation factor 3, subunit Ja [Source:ZFIN;Acc:ZDB-GENE-040426-1266]
98. tmed10 ENSDARG00000041391, ENSDARG00000110672 23599 0.997 - - - - - 0.997 - - - transmembrane p24 trafficking protein 10 [Source:ZFIN;Acc:ZDB-GENE-030131-4915]
99. ddx6 ENSDARG00000061338 2514 0.996 - - - - - 0.996 - - - DEAD (Asp-Glu-Ala-Asp) box helicase 6 [Source:ZFIN;Acc:ZDB-GENE-070912-83]
100. CDS1 ENSDARG00000019549 1659 0.995 - - - - - 0.995 - - - CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 1 [Source:ZFIN;Acc:ZDB-GENE-070705-78]

There are 965 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA