Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ttll4

Gene Name Gene ID Reads Annotation
ttll4 ENSDARG00000078935 1663 tubulin tyrosine ligase-like family, member 4 [Source:ZFIN;Acc:ZDB-GENE-070912-313]










Genes with expression patterns similar to ttll4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ttll4 ENSDARG00000078935 1663 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 tubulin tyrosine ligase-like family, member 4 [Source:ZFIN;Acc:ZDB-GENE-070912-313]
2. arglu1b ENSDARG00000018319 1110 2.333 0.887 0.704 - 0.742 - - - - - arginine and glutamate rich 1b [Source:ZFIN;Acc:ZDB-GENE-040426-736]
3. dct ENSDARG00000006008 2466 1.95 - - - - 0.951 - 0.999 - - dopachrome tautomerase [Source:ZFIN;Acc:ZDB-GENE-000508-1]
4. rtf1 ENSDARG00000008947 6596 1.932 - - - - 0.933 - 0.999 - - RTF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-030131-6778]
5. TSG101 TSG101 1686 1.909 - - - - 0.909 - 1.000 - -
6. SNORD72 SNORD72 4018 1.854 - - - - 0.862 - 0.992 - -
7. usp49 ENSDARG00000000229 706 1.835 0.913 - - - 0.922 - - - - ubiquitin specific peptidase 49 [Source:ZFIN;Acc:ZDB-GENE-050208-484]
8. si:dkey-28b4.8 ENSDARG00000002840 1277 1.83 0.898 - - - 0.932 - - - - si:dkey-28b4.8 [Source:ZFIN;Acc:ZDB-GENE-090501-2]
9. si:ch211-120j21.1 si:ch211-120j21.1 638 1.815 0.901 - - - 0.914 - - - -
10. cpsf5 cpsf5 1841 1.801 0.888 - - - 0.913 - - - -
11. psma4 ENSDARG00000045928 5112 1.791 0.865 - - - 0.926 - - - - proteasome subunit alpha 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1932]
12. sh3yl1 ENSDARG00000074393 815 1.785 0.862 - - - 0.923 - - - - SH3 and SYLF domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040128-16]
13. fam213aa 1986 1.768 - 0.840 - - 0.928 - - - - family with sequence similarity 213, member Aa
14. pinx1 ENSDARG00000023532 4452 1.766 - - - - 0.766 - 1.000 - - PIN2 (TERF1) interacting telomerase inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-030515-2]
15. rif1 ENSDARG00000062650, ENSDARG00000110568 1751 1.765 - 0.765 - - - - 1.000 - - replication timing regulatory factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3406]
16. tmco1 ENSDARG00000069099, ENSDARG00000113013 4698 1.755 - - - - 0.755 - 1.000 - - transmembrane and coiled-coil domains 1 [Source:ZFIN;Acc:ZDB-GENE-050417-344]
17. eva1ba ENSDARG00000102701 1480 1.746 0.827 - - - 0.919 - - - - eva-1 homolog Ba (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-030131-8941]
18. get4 ENSDARG00000024398 1818 1.745 - - - - 0.925 0.820 - - - golgi to ER traffic protein 4 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5399]
19. CABZ01087568.1 CABZ01087568.1 1487 1.734 0.845 - - - 0.889 - - - -
20. pi4k2b ENSDARG00000013881 1337 1.729 0.792 - - - 0.937 - - - - phosphatidylinositol 4-kinase type 2 beta [Source:ZFIN;Acc:ZDB-GENE-070112-990]
21. vcl vcl 6667 1.711 - 0.715 - - - - 0.996 - -
22. sugp1 ENSDARG00000075936 826 1.711 - 0.754 - - 0.957 - - - - SURP and G patch domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-070615-33]
23. tpi1a ENSDARG00000025012 562 1.706 - - - - 0.961 - - 0.745 - triosephosphate isomerase 1a [Source:ZFIN;Acc:ZDB-GENE-020416-3]
24. rprd1b ENSDARG00000038113 1105 1.706 - 0.767 - - 0.939 - - - - regulation of nuclear pre-mRNA domain containing 1B [Source:ZFIN;Acc:ZDB-GENE-030131-355]
25. kdm5c ENSDARG00000006124 4389 1.705 - 0.757 - - 0.948 - - - - lysine (K)-specific demethylase 5C [Source:ZFIN;Acc:ZDB-GENE-060810-94]
26. ube2f ENSDARG00000025754 1946 1.691 0.820 - - - 0.871 - - - - ubiquitin-conjugating enzyme E2F (putative) [Source:ZFIN;Acc:ZDB-GENE-040426-2557]
27. leo1 ENSDARG00000055357 1644 1.682 0.825 - - - 0.857 - - - - LEO1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-040426-2435]
28. map2k2a ENSDARG00000006609 856 1.661 0.801 - - - - 0.860 - - - mitogen-activated protein kinase kinase 2a [Source:ZFIN;Acc:ZDB-GENE-041027-1]
29. paf1 ENSDARG00000098432 1806 1.66 - - - - 0.944 0.716 - - - PAF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-050506-101]
30. TIMM22 ENSDARG00000091413 957 1.657 0.866 0.791 - - - - - - - translocase of inner mitochondrial membrane 22 [Source:HGNC Symbol;Acc:HGNC:17317]
31. hspbp1 ENSDARG00000102937 260 1.655 0.860 0.795 - - - - - - - HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 [Source:ZFIN;Acc:ZDB-GENE-030219-55]
32. mycbp ENSDARG00000091001 1511 1.647 0.850 - - - 0.797 - - - - c-myc binding protein [Source:ZFIN;Acc:ZDB-GENE-060331-97]
33. ccni ENSDARG00000068214 17558 1.645 - - - - 0.700 - 0.945 - - cyclin I [Source:ZFIN;Acc:ZDB-GENE-040426-2898]
34. rwdd ENSDARG00000068256 964 1.644 0.859 0.785 - - - - - - - RWD domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-041010-61]
35. hoxd10a ENSDARG00000057859 1498 1.639 0.865 - - - 0.774 - - - - homeobox D10a [Source:ZFIN;Acc:ZDB-GENE-990415-116]
36. mrpl37 ENSDARG00000062916 1600 1.636 0.767 - - - - 0.869 - - - mitochondrial ribosomal protein L37 [Source:ZFIN;Acc:ZDB-GENE-050309-20]
37. sf3b5 ENSDARG00000016855 4015 1.627 0.837 0.790 - - - - - - - splicing factor 3b, subunit 5 [Source:ZFIN;Acc:ZDB-GENE-040718-181]
38. PPP1R16B ENSDARG00000079860 390 1.617 - 0.865 - - - - - 0.752 - protein phosphatase 1, regulatory subunit 16B [Source:ZFIN;Acc:ZDB-GENE-131127-294]
39. orc1 ENSDARG00000039217, ENSDARG00000115400 795 1.613 0.869 - - - - - - 0.744 - origin recognition complex, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6960]
40. ptpn21 ENSDARG00000062248 2010 1.609 0.896 0.713 - - - - - - - protein tyrosine phosphatase, non-receptor type 21 [Source:ZFIN;Acc:ZDB-GENE-080102-4]
41. ing4 ENSDARG00000030716 5908 1.599 0.865 - - - 0.734 - - - - inhibitor of growth family, member 4 [Source:ZFIN;Acc:ZDB-GENE-050522-47]
42. aup1 ENSDARG00000092609 2431 1.596 0.868 - - - - 0.728 - - - ancient ubiquitous protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3375]
43. her15.2 her15.2 1701 1.588 0.807 - - - 0.781 - - - -
44. si:ch211-51a6.2 ENSDARG00000030967 593 1.574 - 0.831 - - - 0.743 - - - si:ch211-51a6.2 [Source:ZFIN;Acc:ZDB-GENE-090313-118]
45. etfa ENSDARG00000101631 2946 1.57 0.843 - - - - 0.727 - - - electron transfer flavoprotein subunit alpha [Source:ZFIN;Acc:ZDB-GENE-030131-4449]
46. ccnk ENSDARG00000034146 1255 1.566 0.860 0.706 - - - - - - - cyclin K [Source:ZFIN;Acc:ZDB-GENE-030131-5126]
47. cetn3 ENSDARG00000011825 1087 1.564 - 0.753 - - - 0.811 - - - centrin 3 [Source:ZFIN;Acc:ZDB-GENE-050522-152]
48. paip2b ENSDARG00000008706 4255 1.564 0.859 - - - - 0.705 - - - poly(A) binding protein interacting protein 2B [Source:ZFIN;Acc:ZDB-GENE-040426-1736]
49. PAPD5 2090 1.562 - 0.776 - - - 0.786 - - - PAP associated domain containing 5, transcript variant X1
50. dhx57 ENSDARG00000057660 390 1.558 - 0.821 - - - 0.737 - - - DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 [Source:ZFIN;Acc:ZDB-GENE-030131-4078]
51. trib3 ENSDARG00000016200 1231 1.549 0.804 - - - - 0.745 - - - tribbles pseudokinase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2609]
52. utp18 ENSDARG00000102618 1983 1.535 - - - - 0.831 0.704 - - - UTP18 small subunit (SSU) processome component [Source:ZFIN;Acc:ZDB-GENE-060929-668]
53. nup133 ENSDARG00000010078 2373 1.525 - - - - 0.771 - - - 0.754 nucleoporin 133 [Source:ZFIN;Acc:ZDB-GENE-040426-2941]
54. mpdu1b ENSDARG00000040265 1968 1.522 0.729 - - - 0.793 - - - - mannose-P-dolichol utilization defect 1b [Source:ZFIN;Acc:ZDB-GENE-040625-135]
55. mrpl16 ENSDARG00000075325 592 1.521 0.805 0.716 - - - - - - - mitochondrial ribosomal protein L16 [Source:ZFIN;Acc:ZDB-GENE-041122-1]
56. cops8 ENSDARG00000024846, ENSDARG00000115974 3053 1.517 - 0.707 - - - 0.810 - - - COP9 signalosome subunit 8 [Source:ZFIN;Acc:ZDB-GENE-040426-982]
57. chtf8 ENSDARG00000069045, ENSDARG00000115254 1525 1.493 - - - - 0.790 - - 0.703 - CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050419-148]
58. wnk1b ENSDARG00000039392 3587 1.492 0.789 0.703 - - - - - - - WNK lysine deficient protein kinase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2656]
59. EML4_1 EML4_1 8736 1.491 0.749 0.742 - - - - - - -
60. sub1a ENSDARG00000053446 13383 1.49 - - - - 0.706 0.784 - - - SUB1 homolog, transcriptional regulator a [Source:ZFIN;Acc:ZDB-GENE-050522-151]
61. sucla2 ENSDARG00000005359 5992 1.48 - 0.748 - - 0.732 - - - - succinate-CoA ligase, ADP-forming, beta subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1963]
62. parn ENSDARG00000102634 2049 1.479 - 0.773 - - - - - - 0.706 poly(A)-specific ribonuclease (deadenylation nuclease) [Source:ZFIN;Acc:ZDB-GENE-040426-880]
63. cebpz ENSDARG00000045857 270 1.477 - 0.760 - - - - - 0.717 - CCAAT enhancer binding protein zeta [Source:ZFIN;Acc:ZDB-GENE-050417-261]
64. her9 ENSDARG00000056438, ENSDARG00000115775 3099 1.454 - 0.724 - - 0.730 - - - - hairy-related 9 [Source:ZFIN;Acc:ZDB-GENE-011213-1]
65. C4H12orf5 C4H12orf5 158 1.436 - 0.724 - - - 0.712 - - -
66. camk2a ENSDARG00000053617 950 1.436 - 0.703 - - - 0.733 - - - calcium/calmodulin-dependent protein kinase II alpha [Source:ZFIN;Acc:ZDB-GENE-051113-72]
67. bag6 ENSDARG00000075892 3782 1.427 0.727 - - - 0.700 - - - - BCL2 associated athanogene 6 [Source:ZFIN;Acc:ZDB-GENE-010501-5]
68. zcchc9 ENSDARG00000007531 1748 1.412 - 0.701 - - - 0.711 - - - zinc finger, CCHC domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-031030-9]
69. thumpd3 ENSDARG00000059634, ENSDARG00000113066 7065 1 - - - - - - 1.000 - - THUMP domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9745]
70. si:dkey-184p9.7 ENSDARG00000092726 2679 1 - - - - - - 1.000 - - si:dkey-184p9.7 [Source:ZFIN;Acc:ZDB-GENE-091204-97]
71. CCNA2 ENSDARG00000011094 3996 1 - - - - - - 1.000 - - cyclin A2 [Source:ZFIN;Acc:ZDB-GENE-020418-1]
72. cenpf ENSDARG00000055133 5267 1 - - - - - - 1.000 - - centromere protein F [Source:ZFIN;Acc:ZDB-GENE-041111-205]
73. lhfpl2b_1 ENSDARG00000098153 1596 1 - - - - - - 1.000 - - LHFPL tetraspan subfamily member 2b [Source:ZFIN;Acc:ZDB-GENE-050417-10]
74. slc7a4 ENSDARG00000068286 1693 1 - - - - - - 1.000 - - solute carrier family 7, member 4 [Source:ZFIN;Acc:ZDB-GENE-030919-2]
75. PREX2 ENSDARG00000071692 827 1 - - - - - - 1.000 - - phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2 [Source:ZFIN;Acc:ZDB-GENE-091113-37]
76. cx44.1 cx44.1 799 1 - - - - - - 1.000 - -
77. oafa ENSDARG00000075851 2015 1 - - - - - - 1.000 - - OAF homolog a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-090917-1]
78. hoxc10a ENSDARG00000070348 2323 1 - - - - - - 1.000 - - homeobox C10a [Source:ZFIN;Acc:ZDB-GENE-990415-110]
79. rnd3a ENSDARG00000076799 4705 1 - - - - - - 1.000 - - Rho family GTPase 3a [Source:ZFIN;Acc:ZDB-GENE-010319-40]
80. LMLN ENSDARG00000061265 1618 1 - - - - - - 1.000 - - leishmanolysin-like (metallopeptidase M8 family) [Source:ZFIN;Acc:ZDB-GENE-081104-298]
81. pcif1 ENSDARG00000099084 2851 1 - - - - - - 1.000 - - PDX1 C-terminal inhibiting factor 1 [Source:ZFIN;Acc:ZDB-GENE-120920-2]
82. NDUFB2 ENSDARG00000045490 9141 1 - - - - - - 1.000 - - NADH:ubiquinone oxidoreductase subunit B2 [Source:ZFIN;Acc:ZDB-GENE-040426-1762]
83. CR847934.1 CR847934.1 2658 1 - - - - - - 1.000 - -
84. zgc:55558 ENSDARG00000013161, ENSDARG00000111354 1687 1 - - - - - - 1.000 - - zgc:55558 [Source:ZFIN;Acc:ZDB-GENE-040426-740]
85. fam160a1 fam160a1 1445 1 - - - - - - 1.000 - -
86. pdlim5b ENSDARG00000027600 4252 1 - - - - - - 1.000 - - PDZ and LIM domain 5b [Source:ZFIN;Acc:ZDB-GENE-040426-908]
87. slc4a2b ENSDARG00000052330 1900 1 - - - - - - 1.000 - - solute carrier family 4 (anion exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-030429-14]
88. rfxap ENSDARG00000076891 1299 1 - - - - - - 1.000 - - regulatory factor X-associated protein [Source:ZFIN;Acc:ZDB-GENE-091204-321]
89. plagl2 ENSDARG00000076657 2057 1 - - - - - - 1.000 - - pleiomorphic adenoma gene-like 2 [Source:ZFIN;Acc:ZDB-GENE-020806-1]
90. gcn1l1 gcn1l1 6031 1 - - - - - - 1.000 - -
91. CR388095.3 CR388095.3 2548 1 - - - - - - 1.000 - -
92. FAT1 FAT1 689 1 - - - - - - 1.000 - -
93. lepre1 lepre1 5346 0.999 - - - - - - 0.999 - -
94. atp6ap1b ENSDARG00000037153 3970 0.999 - - - - - - 0.999 - - ATPase H+ transporting accessory protein 1b [Source:ZFIN;Acc:ZDB-GENE-020423-2]
95. hbbe2 ENSDARG00000045143, ENSDARG00000109554 5244 0.999 - - - - - - 0.999 - - hemoglobin beta embryonic-2 [Source:ZFIN;Acc:ZDB-GENE-040702-1]
96. ryr1a ENSDARG00000011422 2377 0.999 - - - - - - 0.999 - - ryanodine receptor 1a (skeletal) [Source:ZFIN;Acc:ZDB-GENE-020108-2]
97. SNORD33 SNORD33 3284 0.999 - - - - - - 0.999 - -
98. wwp2 ENSDARG00000061345 3459 0.999 - - - - - - 0.999 - - WW domain containing E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-000607-82]
99. alcamb ENSDARG00000058538 5672 0.999 - - - - - - 0.999 - - activated leukocyte cell adhesion molecule b [Source:ZFIN;Acc:ZDB-GENE-030131-1768]
100. aldh7a1 ENSDARG00000018426 4637 0.998 - - - - - - 0.998 - - aldehyde dehydrogenase 7 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-030131-6129]

There are 1357 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA