Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ttc5

Gene Name Gene ID Reads Annotation
ttc5 ENSDARG00000013329, ENSDARG00000113967 219 tetratricopeptide repeat domain 5 [Source:ZFIN;Acc:ZDB-GENE-050417-137]










Genes with expression patterns similar to ttc5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ttc5 ENSDARG00000013329, ENSDARG00000113967 219 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 tetratricopeptide repeat domain 5 [Source:ZFIN;Acc:ZDB-GENE-050417-137]
2. BX511263.1 BX511263.1 64 1.795 - 0.937 - - - - - 0.858 -
3. slc6a6a ENSDARG00000012534 183 1.793 - 0.950 - - - 0.843 - - - solute carrier family 6 (neurotransmitter transporter), member 6a [Source:ZFIN;Acc:ZDB-GENE-081104-1]
4. SHF SHF 92 1.766 - 0.943 - - - 0.823 - - -
5. prpf3_1 ENSDARG00000086425, ENSDARG00000116776 84 1.76 0.924 - - - - 0.836 - - - PRP3 pre-mRNA processing factor 3 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040823-3]
6. btd ENSDARG00000099596 88 1.755 - 0.956 - - - - 0.799 - - biotinidase [Source:ZFIN;Acc:ZDB-GENE-060825-186]
7. SHISA8 SHISA8 58 1.715 - 0.925 - - - 0.790 - - -
8. zgc:162344 ENSDARG00000070040 126 1.689 - - - - - 0.886 0.803 - - zgc:162344 [Source:ZFIN;Acc:ZDB-GENE-030131-6058]
9. cd40 ENSDARG00000054968 90 1.683 - 0.872 - - - - - 0.811 - CD40 molecule, TNF receptor superfamily member 5 [Source:ZFIN;Acc:ZDB-GENE-090313-95]
10. PKN2 ENSDARG00000101293 358 1.676 - - - - - 0.881 - 0.795 - protein kinase N2 [Source:HGNC Symbol;Acc:HGNC:9406]
11. slc25a35 ENSDARG00000102783 129 1.663 - 0.912 - - - 0.751 - - - solute carrier family 25, member 35 [Source:ZFIN;Acc:ZDB-GENE-060526-142]
12. si:dkey-1b17.5 ENSDARG00000101425 130 1.657 - 0.937 - - - 0.720 - - - si:dkey-1b17.5 [Source:ZFIN;Acc:ZDB-GENE-050208-704]
13. KDM5A ENSDARG00000104567 450 1.65 - - - - - 0.824 - 0.826 - lysine (K)-specific demethylase 5A [Source:ZFIN;Acc:ZDB-GENE-150114-1]
14. PDXP ENSDARG00000109823 195 1.646 0.836 - - - - 0.810 - - - pyridoxal (pyridoxine, vitamin B6) phosphatase [Source:ZFIN;Acc:ZDB-GENE-080723-69]
15. CR388013.3 CR388013.3 45 1.643 - 0.937 0.706 - - - - - -
16. scarb1 ENSDARG00000101557 503 1.641 - 0.828 - - - - - 0.813 - scavenger receptor class B, member 1 [Source:ZFIN;Acc:ZDB-GENE-031126-1]
17. znhit2 ENSDARG00000030805 197 1.636 - 0.842 - - - 0.794 - - - zinc finger, HIT-type containing 2 [Source:ZFIN;Acc:ZDB-GENE-061103-46]
18. msrb2 ENSDARG00000018459 349 1.632 - 0.931 0.701 - - - - - - methionine sulfoxide reductase B2 [Source:ZFIN;Acc:ZDB-GENE-040426-2304]
19. clu ENSDARG00000010434 498 1.63 0.927 - - - - - - 0.703 - clusterin [Source:ZFIN;Acc:ZDB-GENE-040426-1774]
20. nkx2.9 ENSDARG00000020332 357 1.614 0.793 - - - - - - 0.821 - NK2 transcription factor related, locus 9 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-4340]
21. kdm5bb ENSDARG00000003098 531 1.614 - 0.814 - - - 0.800 - - - lysine (K)-specific demethylase 5Bb [Source:ZFIN;Acc:ZDB-GENE-030424-1]
22. si:dkeyp-30e7.2 ENSDARG00000094387 87 1.613 - 0.768 - - - 0.845 - - - si:dkeyp-30e7.2 [Source:ZFIN;Acc:ZDB-GENE-081104-498]
23. ptrh2 ENSDARG00000077339, ENSDARG00000111027 211 1.613 - 0.744 - - - - - 0.869 - peptidyl-tRNA hydrolase 2 [Source:ZFIN;Acc:ZDB-GENE-050522-163]
24. znf511 ENSDARG00000000760 446 1.612 - - - - - 0.708 - 0.904 - zinc finger protein 511 [Source:ZFIN;Acc:ZDB-GENE-030616-621]
25. CU638740.3 CU638740.3 164 1.601 - - 0.742 - - 0.859 - - -
26. ism2 ism2 153 1.6 - - - - - 0.788 - 0.812 -
27. si:dkey-51d8.9 ENSDARG00000096217 47 1.597 - 0.885 - - - 0.712 - - - si:dkey-51d8.9 [Source:ZFIN;Acc:ZDB-GENE-110914-66]
28. FP016199.1 FP016199.1 43 1.57 - 0.852 0.718 - - - - - -
29. lrwd1 ENSDARG00000035147 464 1.569 - - - - - 0.785 - 0.784 - leucine-rich repeats and WD repeat domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5335]
30. si:dkey-242h9.3 ENSDARG00000069189 83 1.558 - 0.828 - - - - 0.730 - - si:dkey-242h9.3 [Source:ZFIN;Acc:ZDB-GENE-060503-347]
31. kdm2bb ENSDARG00000046010 747 1.55 - 0.813 - - - 0.737 - - - lysine (K)-specific demethylase 2Bb [Source:ZFIN;Acc:ZDB-GENE-080225-13]
32. pdxka ENSDARG00000088959 217 1.54 - 0.818 - - - 0.722 - - - pyridoxal (pyridoxine, vitamin B6) kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-8376]
33. FEZ2_1 FEZ2_1 153 1.534 - - - - - 0.760 - 0.774 -
34. si:ch211-102c2.4 ENSDARG00000079387 101 1.525 - - - - - 0.778 - 0.747 - si:ch211-102c2.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8862]
35. osbpl11 ENSDARG00000076328 195 1.494 - 0.785 - - - - - 0.709 - oxysterol binding protein-like 11 [Source:ZFIN;Acc:ZDB-GENE-081105-135]
36. si:ch211-199m9.3 50 1.491 - 0.728 - - - 0.763 - - - si:ch211-199m9.3, transcript variant X3
37. TMEM17 ENSDARG00000116334 218 1.483 - - - - 0.734 - - 0.749 - transmembrane protein 17 [Source:ZFIN;Acc:ZDB-GENE-070615-15]
38. si:ch73-387e10.3 si:ch73-387e10.3 517 1.482 - 0.735 - - - 0.747 - - -
39. zgc:113531 ENSDARG00000038794 2063 1.481 0.705 0.776 - - - - - - - zgc:113531 [Source:ZFIN;Acc:ZDB-GENE-050320-52]
40. BX323050.1 BX323050.1 116 1.477 - - - - - 0.762 0.715 - -
41. si:dkey-40c11.2 ENSDARG00000032482 228 1.476 - - - - - - 0.743 0.733 - si:dkey-40c11.2 [Source:ZFIN;Acc:ZDB-GENE-060526-300]
42. si:ch73-112l6.1 ENSDARG00000093126 87 1.472 - - 0.750 - - 0.722 - - - si:ch73-112l6.1 [Source:ZFIN;Acc:ZDB-GENE-091204-14]
43. si:ch211-161h7.8 ENSDARG00000089919 60 1.462 - - - - - 0.740 0.722 - - si:ch211-161h7.8 [Source:ZFIN;Acc:ZDB-GENE-091204-302]
44. si:ch211-255g12.7 si:ch211-255g12.7 44 1.447 - - - - - 0.708 0.739 - -
45. SERTAD4 ENSDARG00000089795 791 1.438 - - - - - 0.720 0.718 - - SERTA domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-090313-199]
46. si:ch211-197n1.2 58 0.987 - 0.987 - - - - - - - si:ch211-197n1.2, transcript variant X1
47. gabrg2 ENSDARG00000053665 434 0.981 - 0.981 - - - - - - - gamma-aminobutyric acid (GABA) A receptor, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-091118-65]
48. ccni2 ENSDARG00000033046 418 0.975 - 0.975 - - - - - - - cyclin I family, member 2 [Source:ZFIN;Acc:ZDB-GENE-081106-2]
49. nefma ENSDARG00000021351 790 0.974 - 0.974 - - - - - - - neurofilament, medium polypeptide a [Source:ZFIN;Acc:ZDB-GENE-050522-205]
50. rusc1 ENSDARG00000078125 617 0.974 - 0.974 - - - - - - - RUN and SH3 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100922-274]
51. CR847998.1 ENSDARG00000104784 518 0.974 - 0.974 - - - - - - -
52. TGIF2 TGIF2 22 0.973 - 0.973 - - - - - - -
53. htra1a ENSDARG00000032831, ENSDARG00000111829 1008 0.971 - 0.971 - - - - - - - HtrA serine peptidase 1a [Source:ZFIN;Acc:ZDB-GENE-040704-64]
54. RPH3A RPH3A 309 0.97 - 0.970 - - - - - - -
55. zgc:153738 ENSDARG00000069230 84 0.968 - - - - - 0.968 - - - zgc:153738 [Source:ZFIN;Acc:ZDB-GENE-061013-622]
56. gnai2b ENSDARG00000017294 686 0.966 - 0.966 - - - - - - - guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5861]
57. snap25b ENSDARG00000058117 469 0.965 - 0.965 - - - - - - - synaptosomal-associated protein, 25b [Source:ZFIN;Acc:ZDB-GENE-980526-392]
58. si:rp71-1g18.1 ENSDARG00000053792, ENSDARG00000111192 437 0.963 - 0.963 - - - - - - - si:rp71-1g18.1 [Source:ZFIN;Acc:ZDB-GENE-030131-5470]
59. zgc:110821 ENSDARG00000077085 210 0.961 - 0.961 - - - - - - - zgc:110821 [Source:ZFIN;Acc:ZDB-GENE-050227-8]
60. tmie ENSDARG00000069423 305 0.958 - 0.958 - - - - - - - transmembrane inner ear [Source:ZFIN;Acc:ZDB-GENE-061207-9]
61. gcgrb ENSDARG00000036272 54 0.958 - 0.958 - - - - - - - glucagon receptor b [Source:ZFIN;Acc:ZDB-GENE-050516-2]
62. pcsk1 ENSDARG00000002600 404 0.956 - 0.956 - - - - - - - proprotein convertase subtilisin/kexin type 1 [Source:ZFIN;Acc:ZDB-GENE-071009-1]
63. ppm1db ENSDARG00000021380, ENSDARG00000112471, ENSDARG00000113667, ENSDARG00000116463 372 0.955 - 0.955 - - - - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1Db [Source:ZFIN;Acc:ZDB-GENE-041114-27]
64. mcm3 ENSDARG00000024204 20 0.954 - 0.954 - - - - - - - minichromosome maintenance complex component 3 [Source:ZFIN;Acc:ZDB-GENE-020419-4]
65. agtr1b ENSDARG00000045443 232 0.954 - 0.954 - - - - - - - angiotensin II receptor, type 1b [Source:ZFIN;Acc:ZDB-GENE-110411-117]
66. mir10b-2 116 0.95 - 0.950 - - - - - - - microRNA 10b-2
67. top3a ENSDARG00000052827 148 0.95 - 0.950 - - - - - - - DNA topoisomerase III alpha [Source:ZFIN;Acc:ZDB-GENE-071212-2]
68. zgc:162509 ENSDARG00000070604, ENSDARG00000095688 25 0.95 - 0.950 - - - - - - - zgc:162509 [Source:ZFIN;Acc:ZDB-GENE-050809-100]
69. tnfsf12 ENSDARG00000069376, ENSDARG00000109341 49 0.949 - 0.949 - - - - - - - TNF superfamily member 12 [Source:ZFIN;Acc:ZDB-GENE-060929-376]
70. zgc:173710 zgc:173710 28 0.949 - 0.949 - - - - - - -
71. si:ch211-89o5.3 si:ch211-89o5.3 5 0.949 - 0.949 - - - - - - -
72. iqsec2 iqsec2 304 0.949 - 0.949 - - - - - - -
73. zgc:114046 ENSDARG00000091728 68 0.949 - 0.949 - - - - - - - zgc:114046 [Source:ZFIN;Acc:ZDB-GENE-050320-24]
74. si:ch211-76l23.5 si:ch211-76l23.5 26 0.948 - 0.948 - - - - - - -
75. NPBWR2 NPBWR2 132 0.948 - 0.948 - - - - - - -
76. xdh ENSDARG00000055240 250 0.948 - 0.948 - - - - - - - xanthine dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-070719-9]
77. wfikkn2a ENSDARG00000013460 859 0.946 - 0.946 - - - - - - - info WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-120914-1]
78. rnf181 ENSDARG00000023958 270 0.946 - 0.946 - - - - - - - ring finger protein 181 [Source:ZFIN;Acc:ZDB-GENE-040426-1024]
79. zgc:136254 ENSDARG00000068465 27 0.946 - 0.946 - - - - - - - zgc:136254 [Source:ZFIN;Acc:ZDB-GENE-060421-3062]
80. otof otof 127 0.946 - 0.946 - - - - - - -
81. sypb ENSDARG00000002230 262 0.945 - 0.945 - - - - - - - synaptophysin b [Source:ZFIN;Acc:ZDB-GENE-040718-205]
82. KIF3A ENSDARG00000087538, ENSDARG00000109880, ENSDARG00000117005 95 0.944 - 0.944 - - - - - - - kinesin family member 3A [Source:ZFIN;Acc:ZDB-GENE-050417-71]
83. zgc:158856 zgc:158856 23 0.944 - 0.944 - - - - - - -
84. sorbs2a ENSDARG00000003046 242 0.943 - 0.943 - - - - - - - sorbin and SH3 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-070308-2]
85. TATDN1 ENSDARG00000036924 246 0.943 - - - - - 0.943 - - - TatD DNase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040704-56]
86. TOB2 TOB2 254 0.942 - 0.942 - - - - - - -
87. adamts9 ENSDARG00000077778 419 0.941 - 0.941 - - - - - - - ADAM metallopeptidase with thrombospondin type 1 motif, 9 [Source:ZFIN;Acc:ZDB-GENE-070814-6]
88. slc41a1 ENSDARG00000070214, ENSDARG00000114707 20 0.939 - 0.939 - - - - - - - solute carrier family 41 (magnesium transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4700]
89. idua ENSDARG00000062904 105 0.939 - 0.939 - - - - - - - iduronidase, alpha-L- [Source:ZFIN;Acc:ZDB-GENE-060526-29]
90. zmynd19 ENSDARG00000100773 224 0.938 - 0.938 - - - - - - - zinc finger, MYND-type containing 19 [Source:ZFIN;Acc:ZDB-GENE-030131-4460]
91. CR847511.1 CR847511.1 80 0.937 - 0.937 - - - - - - -
92. FKBP15 FKBP15 15 0.937 - 0.937 - - - - - - -
93. itln2_1 ENSDARG00000036084, ENSDARG00000093796, ENSDARG00000115958 3 0.937 - 0.937 - - - - - - - intelectin 2 [Source:NCBI gene;Acc:100007792]
94. olfml3a ENSDARG00000061852 139 0.937 - 0.937 - - - - - - - olfactomedin-like 3a [Source:ZFIN;Acc:ZDB-GENE-060825-31]
95. si:ch211-126g16.8 3 0.937 - 0.937 - - - - - - - si:ch211-126g16.8, transcript variant X1
96. RBM44 RBM44 25 0.937 - 0.937 - - - - - - -
97. cers4a ENSDARG00000031387 19 0.937 - 0.937 - - - - - - - ceramide synthase 4a [Source:ZFIN;Acc:ZDB-GENE-020808-1]
98. SSTR2 SSTR2 12 0.937 - 0.937 - - - - - - -
99. SOX8 SOX8 22 0.937 - 0.937 - - - - - - -
100. ndufs8b ENSDARG00000057055 10 0.937 - 0.937 - - - - - - - NADH:ubiquinone oxidoreductase core subunit S8b [Source:ZFIN;Acc:ZDB-GENE-050522-131]

There are 1048 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA