Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for ttc4

Gene Name Gene ID Reads Annotation
ttc4 ENSDARG00000044405, ENSDARG00000117012 453 tetratricopeptide repeat domain 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1021]










Genes with expression patterns similar to ttc4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ttc4 ENSDARG00000044405, ENSDARG00000117012 453 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 tetratricopeptide repeat domain 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1021]
2. pnpo ENSDARG00000017612, ENSDARG00000109509 570 1.657 - - - - - 0.857 - 0.800 - pyridoxamine 5'-phosphate oxidase [Source:ZFIN;Acc:ZDB-GENE-060602-2]
3. fbxw2 ENSDARG00000009745 618 1.644 - - - - - - 0.804 0.840 - F-box and WD repeat domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-050522-303]
4. mrps22 ENSDARG00000018073, ENSDARG00000115927 177 1.611 - - - - - 0.816 0.795 - - mitochondrial ribosomal protein S22 [Source:ZFIN;Acc:ZDB-GENE-070615-31]
5. NGFR NGFR 186 1.609 - - - - - - 0.766 0.843 -
6. TRAFD1 ENSDARG00000075123, ENSDARG00000109953 358 1.606 - - - - - - 0.734 0.872 - TRAF-type zinc finger domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-070410-43]
7. pfkfb4 pfkfb4 194 1.552 - 0.762 - - - - 0.790 - -
8. hbp1 ENSDARG00000028517 571 1.552 0.738 - - - - - 0.814 - - HMG-box transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-050522-414]
9. si:dkey-70e17.2 si:dkey-70e17.2 371 1.552 - 0.762 - - - - - 0.790 -
10. PKN2 ENSDARG00000101293 358 1.547 - - - - - - 0.738 0.809 - protein kinase N2 [Source:HGNC Symbol;Acc:HGNC:9406]
11. ccdc85b ENSDARG00000061543 1309 1.538 - 0.806 - - - - 0.732 - - coiled-coil domain containing 85B [Source:ZFIN;Acc:ZDB-GENE-060130-56]
12. wdr36 ENSDARG00000004774 887 1.529 - 0.782 - - - 0.747 - - - WD repeat domain 36 [Source:ZFIN;Acc:ZDB-GENE-030131-464]
13. fbxo18 ENSDARG00000062983, ENSDARG00000113423 1458 1.528 - 0.780 - - - - - 0.748 - F-box protein helicase 1 [Source:ZFIN;Acc:ZDB-GENE-041210-99]
14. gnptg ENSDARG00000038566 259 1.52 - - - - - - 0.790 0.730 - N-acetylglucosamine-1-phosphate transferase subunit gamma [Source:ZFIN;Acc:ZDB-GENE-040625-18]
15. SATB1 SATB1 928 1.509 - 0.745 - - - - 0.764 - -
16. klf7a ENSDARG00000073857 1226 1.478 - 0.753 - - - - - 0.725 - Kruppel-like factor 7a [Source:ZFIN;Acc:ZDB-GENE-050522-276]
17. dnajc4 ENSDARG00000024090, ENSDARG00000114838 403 1.477 - 0.728 - - - - - 0.749 - DnaJ (Hsp40) homolog, subfamily C, member 4 [Source:ZFIN;Acc:ZDB-GENE-030131-3093]
18. slc25a16 ENSDARG00000057287, ENSDARG00000109352 988 1.463 - 0.748 - - - 0.715 - - - solute carrier family 25 (mitochondrial carrier; Graves disease autoantigen), member 16 [Source:ZFIN;Acc:ZDB-GENE-030131-3299]
19. atg16l1 ENSDARG00000099430 924 1.442 - - - - - - 0.735 0.707 - ATG16 autophagy related 16-like 1 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050417-401]
20. mtx1b ENSDARG00000036109 445 1.419 - - - - - - 0.706 0.713 - metaxin 1b [Source:ZFIN;Acc:ZDB-GENE-021210-1]
21. gpr56 gpr56 523 0.911 - - - - - - - 0.911 -
22. blf ENSDARG00000043126 433 0.906 - - - - - 0.906 - - - bloody fingers [Source:ZFIN;Acc:ZDB-GENE-050721-1]
23. EEF1E1 ENSDARG00000071774 3806 0.902 - 0.902 - - - - - - - eukaryotic translation elongation factor 1 epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4949]
24. ASPH ENSDARG00000055945 214 0.888 - - - - - - 0.888 - - aspartate beta-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-031112-5]
25. PHF13 ENSDARG00000102023 1102 0.887 - - - - - - 0.887 - - PHD finger protein 13 [Source:ZFIN;Acc:ZDB-GENE-121113-2]
26. BICD2 ENSDARG00000075571 401 0.886 - - - - - - 0.886 - - bicaudal D homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-120717-1]
27. igfbp1a ENSDARG00000099351 1717 0.886 - 0.886 - - - - - - - insulin-like growth factor binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-021231-1]
28. rrp15 ENSDARG00000013478 1126 0.884 - - - - - - - 0.884 - ribosomal RNA processing 15 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-5261]
29. TTC37 ENSDARG00000074314 356 0.883 - - - - - - - 0.883 - tetratricopeptide repeat domain 37 [Source:ZFIN;Acc:ZDB-GENE-110125-2]
30. MAP6 MAP6 643 0.879 - - - - - - - 0.879 -
31. si:dkey-243i1.1 ENSDARG00000034227 257 0.877 - - - - - - 0.877 - - si:dkey-243i1.1 [Source:ZFIN;Acc:ZDB-GENE-030131-6399]
32. sestd1 ENSDARG00000040614 1014 0.876 - 0.876 - - - - - - - SEC14 and spectrin domains 1 [Source:ZFIN;Acc:ZDB-GENE-030801-1]
33. thtpa ENSDARG00000063049 286 0.876 - - - - - - 0.876 - - thiamine triphosphatase [Source:ZFIN;Acc:ZDB-GENE-070502-2]
34. znf511 ENSDARG00000000760 446 0.875 - - - - - - - 0.875 - zinc finger protein 511 [Source:ZFIN;Acc:ZDB-GENE-030616-621]
35. zgc:174862 ENSDARG00000077571 201 0.872 - - - - - - - 0.872 - zgc:174862 [Source:ZFIN;Acc:ZDB-GENE-080303-29]
36. acvr1l ENSDARG00000014986 1239 0.871 - - - - - - 0.871 - - activin A receptor, type 1 like [Source:ZFIN;Acc:ZDB-GENE-990415-9]
37. zgc:174268 ENSDARG00000076807 250 0.868 - - - - - - - 0.868 - zgc:174268 [Source:ZFIN;Acc:ZDB-GENE-080219-18]
38. mir199-3 mir199-3 826 0.867 - - - - - - 0.867 - -
39. N4BP2L1 N4BP2L1 573 0.867 - - - - - - - 0.867 -
40. si:dkey-40c11.2 ENSDARG00000032482 228 0.867 - - - - - - - 0.867 - si:dkey-40c11.2 [Source:ZFIN;Acc:ZDB-GENE-060526-300]
41. sox9a ENSDARG00000003293 812 0.867 - 0.867 - - - - - - - SRY (sex determining region Y)-box 9a [Source:ZFIN;Acc:ZDB-GENE-001103-1]
42. lrwd1 ENSDARG00000035147 464 0.866 - - - - - - - 0.866 - leucine-rich repeats and WD repeat domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5335]
43. zgc:173726 ENSDARG00000077078 250 0.866 - - - - - - - 0.866 - zgc:173726 [Source:ZFIN;Acc:ZDB-GENE-071004-108]
44. eif4e3 ENSDARG00000005078 1624 0.863 - 0.863 - - - - - - - eukaryotic translation initiation factor 4E family member 3 [Source:ZFIN;Acc:ZDB-GENE-040912-156]
45. mpp5a ENSDARG00000006272 1181 0.863 - 0.863 - - - - - - - membrane protein, palmitoylated 5a (MAGUK p55 subfamily member 5) [Source:ZFIN;Acc:ZDB-GENE-020712-1]
46. nrg1 ENSDARG00000104314 1081 0.861 - - - - - - 0.861 - - neuregulin 1 [Source:ZFIN;Acc:ZDB-GENE-050302-113]
47. BX511263.1 BX511263.1 64 0.86 - - - - - - - 0.860 -
48. tmem55a 1331 0.859 - 0.859 - - - - - - - transmembrane protein 55A
49. GPRIN3 GPRIN3 169 0.859 - - - - - - - 0.859 -
50. elp4 ENSDARG00000008852 253 0.856 - - - - - - - 0.856 - elongator acetyltransferase complex subunit 4 [Source:ZFIN;Acc:ZDB-GENE-050417-114]
51. CABZ01043311.1 CABZ01043311.1 475 0.855 - 0.855 - - - - - - -
52. cep72 ENSDARG00000105258 344 0.853 - - - - - - 0.853 - - centrosomal protein 72 [Source:ZFIN;Acc:ZDB-GENE-101115-1]
53. cyp2k8 ENSDARG00000101190 69 0.852 - - - - - - - 0.852 - cytochrome P450, family 2, subfamily K, polypeptide 8 [Source:ZFIN;Acc:ZDB-GENE-080721-19]
54. FAM188B FAM188B 145 0.852 - - - - - - 0.852 - -
55. CLMN ENSDARG00000096867 73 0.852 - - - - - - - 0.852 - calmin [Source:ZFIN;Acc:ZDB-GENE-131127-546]
56. CR383676.3_1 CR383676.3_1 177 0.851 - - - - - - - 0.851 -
57. CT955984.1 ENSDARG00000113577 1482 0.851 - - - - - - - 0.851 -
58. si:ch211-39k3.2 ENSDARG00000075881 531 0.85 - - - - - - - 0.850 - si:ch211-39k3.2 [Source:ZFIN;Acc:ZDB-GENE-070705-180]
59. MFSD3 MFSD3 407 0.848 - - - - - - 0.848 - -
60. pfkfb2a ENSDARG00000023840 184 0.848 - - - - - - - 0.848 - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2a [Source:ZFIN;Acc:ZDB-GENE-040426-966]
61. otud3 ENSDARG00000022648 263 0.848 - - - - - - 0.848 - - OTU deubiquitinase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2509]
62. si:ch211-66k16.20 si:ch211-66k16.20 162 0.847 - - - - - - 0.847 - -
63. si:ch211-59h6.1 ENSDARG00000013022 193 0.847 - - - - - - - 0.847 - si:ch211-59h6.1 [Source:ZFIN;Acc:ZDB-GENE-091204-418]
64. zgc:113208 ENSDARG00000035610, ENSDARG00000109302 1095 0.847 - - - - - - - 0.847 - zgc:113208 [Source:ZFIN;Acc:ZDB-GENE-050417-450]
65. ppp2r4 1005 0.847 - 0.847 - - - - - - - protein phosphatase 2A activator, regulatory subunit 4
66. crfb5 crfb5 342 0.846 - - - - - - 0.846 - -
67. cd40 ENSDARG00000054968 90 0.845 - - - - - - - 0.845 - CD40 molecule, TNF receptor superfamily member 5 [Source:ZFIN;Acc:ZDB-GENE-090313-95]
68. kirrelb 383 0.845 - - - - - - 0.845 - - kin of IRRE like b, transcript variant X3
69. d2hgdh ENSDARG00000060210 362 0.845 - - - - - - - 0.845 - D-2-hydroxyglutarate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-070112-482]
70. frmd4bb ENSDARG00000076496 18 0.844 - - - - - - - 0.844 - FERM domain containing 4Bb [Source:ZFIN;Acc:ZDB-GENE-100921-74]
71. acss1 ENSDARG00000044142, ENSDARG00000109700 516 0.844 - - - - - - 0.844 - - acyl-CoA synthetase short chain family member 1 [Source:ZFIN;Acc:ZDB-GENE-050320-139]
72. si:dkeyp-19e1.3 ENSDARG00000051836 531 0.843 - - - - - - 0.843 - - si:dkeyp-19e1.3 [Source:ZFIN;Acc:ZDB-GENE-081104-56]
73. zgc:113294 ENSDARG00000032285 132 0.842 - - - - - - - 0.842 - zgc:113294 [Source:ZFIN;Acc:ZDB-GENE-050320-124]
74. C1H7orf26 C1H7orf26 232 0.842 - - - - - 0.842 - - -
75. si:ch211-237l4.6 ENSDARG00000056915 49 0.842 - - - - - - - 0.842 - si:ch211-237l4.6 [Source:ZFIN;Acc:ZDB-GENE-040724-42]
76. crfb17 511 0.84 - - - - - - - 0.840 - cytokine receptor family member B17
77. gprc5c ENSDARG00000100862 457 0.84 - - - - - 0.840 - - - G protein-coupled receptor, class C, group 5, member C [Source:ZFIN;Acc:ZDB-GENE-070928-27]
78. si:ch211-117c9.5 ENSDARG00000071235 154 0.84 - - - - - - - 0.840 - si:ch211-117c9.5 [Source:ZFIN;Acc:ZDB-GENE-110408-2]
79. POLRMT ENSDARG00000101220 215 0.839 - - - - - - - 0.839 - polymerase (RNA) mitochondrial (DNA directed) [Source:ZFIN;Acc:ZDB-GENE-030131-1528]
80. CABZ01086801.1 CABZ01086801.1 41 0.839 - - - - - - - 0.839 -
81. si:dkey-102g19.3 ENSDARG00000086337 26 0.839 - - - - - - 0.839 - - si:dkey-102g19.3 [Source:ZFIN;Acc:ZDB-GENE-091204-230]
82. macrod1 ENSDARG00000029609 66 0.839 - - - - - - 0.839 - - MACRO domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040912-100]
83. ap2m1b ENSDARG00000033899 317 0.839 - - - - - - 0.839 - - adaptor related protein complex 2 subunit mu 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1103]
84. utp15 ENSDARG00000002720 679 0.837 - - - - - - 0.837 - - utp15, U3 small nucleolar ribonucleoprotein, homolog [Source:ZFIN;Acc:ZDB-GENE-030131-3831]
85. nudcd1 ENSDARG00000036158 608 0.837 - - - - - - 0.837 - - NudC domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050522-483]
86. znrf3 ENSDARG00000062573 205 0.837 - - - - - - - 0.837 - zinc and ring finger 3 [Source:ZFIN;Acc:ZDB-GENE-070705-263]
87. nkx2.9 ENSDARG00000020332 357 0.836 - - - - - - - 0.836 - NK2 transcription factor related, locus 9 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-4340]
88. zgc:92907 ENSDARG00000011026 986 0.836 - - - - - - - 0.836 - zgc:92907 [Source:ZFIN;Acc:ZDB-GENE-040718-161]
89. PRKD3 ENSDARG00000079967 192 0.835 - - - - - 0.835 - - - protein kinase D3 [Source:ZFIN;Acc:ZDB-GENE-130530-880]
90. ASTL ASTL 24 0.835 - - - - - - - 0.835 -
91. rsrc1 ENSDARG00000033987 552 0.835 - - - - - - - 0.835 - arginine/serine-rich coiled-coil 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2374]
92. smyd3 ENSDARG00000058050 69 0.834 - - - - - - - 0.834 - SET and MYND domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-051120-138]
93. ube2j1 ENSDARG00000033489 497 0.834 - - - - - - 0.834 - - ubiquitin-conjugating enzyme E2, J1 [Source:ZFIN;Acc:ZDB-GENE-040426-2853]
94. traf1 ENSDARG00000069482 50 0.834 - - - - - - - 0.834 - TNF receptor-associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-071120-4]
95. slc2a1b ENSDARG00000007412 1028 0.834 - - - - - - 0.834 - - solute carrier family 2 (facilitated glucose transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-090915-1]
96. senp5 ENSDARG00000060646 303 0.833 - - - - - - 0.833 - - SUMO specific peptidase 5 [Source:ZFIN;Acc:ZDB-GENE-050208-772]
97. zgc:63972 ENSDARG00000054288, ENSDARG00000112978 78 0.833 - - - - - - - 0.833 - zgc:63972 [Source:ZFIN;Acc:ZDB-GENE-040426-1320]
98. FP102801.1 FP102801.1 294 0.832 - - - - - - - 0.832 -
99. MAN1A2 ENSDARG00000041728 359 0.831 - - - - - - - 0.831 - mannosidase, alpha, class 1A, member 2 [Source:ZFIN;Acc:ZDB-GENE-070912-390]
100. ptrh2 ENSDARG00000077339, ENSDARG00000111027 211 0.831 - - - - - - - 0.831 - peptidyl-tRNA hydrolase 2 [Source:ZFIN;Acc:ZDB-GENE-050522-163]

There are 768 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA