Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for ttc1

Gene Name Gene ID Reads Annotation
ttc1 ENSDARG00000044567 1141 tetratricopeptide repeat domain 1 [Source:ZFIN;Acc:ZDB-GENE-041114-80]










Genes with expression patterns similar to ttc1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. ttc1 ENSDARG00000044567 1141 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 tetratricopeptide repeat domain 1 [Source:ZFIN;Acc:ZDB-GENE-041114-80]
2. mmp16a 1128 2.686 - - - 0.858 - - 0.944 - 0.884 matrix metallopeptidase 16a (membrane-inserted)
3. srrm2 ENSDARG00000037965 1967 2.536 - - - 0.794 - - 0.982 0.760 - serine/arginine repetitive matrix 2 [Source:ZFIN;Acc:ZDB-GENE-050522-399]
4. aftpha ENSDARG00000069249 867 2.458 - 0.750 - 0.773 - - - - 0.935 aftiphilin a [Source:ZFIN;Acc:ZDB-GENE-030131-1437]
5. nfkbiab ENSDARG00000007693 1345 2.405 - - - 0.770 - 0.760 - - 0.875 nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b [Source:ZFIN;Acc:ZDB-GENE-030131-1819]
6. dhdds ENSDARG00000039851 1135 1.938 - - - - - - 0.992 - 0.946 dehydrodolichyl diphosphate synthase [Source:ZFIN;Acc:ZDB-GENE-040426-2236]
7. rad51 ENSDARG00000041411, ENSDARG00000111948 1056 1.92 - - - - - - 0.981 - 0.939 RAD51 recombinase [Source:ZFIN;Acc:ZDB-GENE-040426-2286]
8. TAF2 ENSDARG00000102307 1401 1.899 - - - - - - 0.950 - 0.949 TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-3207]
9. ifrd1 ENSDARG00000068708 2858 1.881 - - - - - - 0.935 - 0.946 interferon-related developmental regulator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6132]
10. smurf1 ENSDARG00000016086 878 1.881 - - - - - - 0.990 - 0.891 SMAD specific E3 ubiquitin protein ligase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2744]
11. ik ENSDARG00000004161 3132 1.871 - - - - - - 0.967 - 0.904 IK cytokine [Source:ZFIN;Acc:ZDB-GENE-030131-960]
12. gde1 ENSDARG00000055108, ENSDARG00000110855 1261 1.852 - - - - - - 0.948 - 0.904 glycerophosphodiester phosphodiesterase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-881]
13. pes ENSDARG00000018902 3286 1.837 - - - - - - 0.985 - 0.852 pescadillo [Source:ZFIN;Acc:ZDB-GENE-990415-206]
14. cpsf1 ENSDARG00000034178 2036 1.836 - - - - - - 0.975 - 0.861 cleavage and polyadenylation specific factor 1 [Source:ZFIN;Acc:ZDB-GENE-040709-2]
15. gstal gstal 1865 1.798 - - - - - - 0.932 - 0.866
16. timm23 timm23 2712 1.796 - - - 0.815 - - 0.981 - -
17. si:ch73-108h4.3 si:ch73-108h4.3 193 1.781 - - - - - - 0.991 0.790 -
18. cadm1a ENSDARG00000031075 2484 1.761 - - - 0.817 - - 0.944 - - cell adhesion molecule 1a [Source:ZFIN;Acc:ZDB-GENE-080505-2]
19. cdan1 ENSDARG00000042261 658 1.754 - - - 0.797 - - - - 0.957 codanin 1 [Source:ZFIN;Acc:ZDB-GENE-110411-280]
20. acbd3 ENSDARG00000042623 2643 1.739 - - - - - - 0.913 0.826 - acyl-Coenzyme A binding domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1930]
21. ncapg2 ENSDARG00000060023 993 1.737 - - - 0.764 - - 0.973 - - non-SMC condensin II complex, subunit G2 [Source:ZFIN;Acc:ZDB-GENE-070410-100]
22. igbp1 ENSDARG00000002184, ENSDARG00000117141 879 1.737 - - - 0.751 - - 0.986 - - immunoglobulin (CD79A) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2928]
23. SPEN ENSDARG00000074245, ENSDARG00000116696 1412 1.737 - - - 0.742 - - 0.995 - - spen family transcriptional repressor [Source:ZFIN;Acc:ZDB-GENE-050309-70]
24. rac3b ENSDARG00000020795 1523 1.736 - - - 0.750 - - 0.986 - - Rac family small GTPase 3b [Source:ZFIN;Acc:ZDB-GENE-080220-21]
25. C10H12orf44 C10H12orf44 787 1.733 - - - - - 0.755 0.978 - -
26. cndp2 ENSDARG00000003931 1177 1.731 - - - - - - 0.988 0.743 - carnosine dipeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5499]
27. ndufa6 ENSDARG00000038028 2653 1.73 - - - - - - 0.907 - 0.823 NADH:ubiquinone oxidoreductase subunit A6 [Source:ZFIN;Acc:ZDB-GENE-040426-1124]
28. CABZ01078889.1 CABZ01078889.1 911 1.73 - - - - - 0.746 0.984 - -
29. dnajc9 ENSDARG00000031293, ENSDARG00000111989 4082 1.72 - 0.747 - - - - 0.973 - - DnaJ (Hsp40) homolog, subfamily C, member 9 [Source:ZFIN;Acc:ZDB-GENE-040718-130]
30. si:ch211-196l7.4 ENSDARG00000095451 3766 1.717 - 0.774 - - - - 0.943 - - si:ch211-196l7.4 [Source:ZFIN;Acc:ZDB-GENE-050419-122]
31. WDR44 ENSDARG00000060249, ENSDARG00000114185, ENSDARG00000114247, ENSDARG00000117103 2545 1.715 - 0.880 - - - - - - 0.835 WD repeat domain 44 [Source:NCBI gene;Acc:569045]
32. phf10 ENSDARG00000070084 1210 1.712 - - - 0.806 - - - - 0.906 PHD finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1573]
33. dmbx1b ENSDARG00000002510 351 1.71 - - - 0.785 - - - - 0.925 diencephalon/mesencephalon homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-050417-97]
34. usp49 ENSDARG00000000229 706 1.708 - - - 0.782 - - - - 0.926 ubiquitin specific peptidase 49 [Source:ZFIN;Acc:ZDB-GENE-050208-484]
35. ZNF518B 475 1.706 - - - - - - - 0.752 0.954 zinc finger protein 518B
36. rybpb ENSDARG00000053459 1464 1.704 - - - - - - 0.975 0.729 - RING1 and YY1 binding protein b [Source:ZFIN;Acc:ZDB-GENE-061103-96]
37. nploc4 ENSDARG00000100487 1262 1.695 - - - - - - - 0.805 0.890 NPL4 homolog, ubiquitin recognition factor [Source:ZFIN;Acc:ZDB-GENE-030131-5658]
38. etnk1 ENSDARG00000019420 2166 1.686 - 0.755 - - - - 0.931 - - ethanolamine kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030328-21]
39. arfip1 ENSDARG00000070055, ENSDARG00000116473 3113 1.682 - 0.805 - - - - - - 0.877 ADP-ribosylation factor interacting protein 1 (arfaptin 1) [Source:ZFIN;Acc:ZDB-GENE-040426-2690]
40. abca1a ENSDARG00000074635 1085 1.682 - - - 0.775 - - - - 0.907 ATP-binding cassette, sub-family A (ABC1), member 1A [Source:ZFIN;Acc:ZDB-GENE-031006-12]
41. ptgesl ENSDARG00000068415, ENSDARG00000110236 1718 1.679 - 0.717 - - - - 0.962 - - prostaglandin E synthase 2-like [Source:ZFIN;Acc:ZDB-GENE-040426-1063]
42. ubl3b ENSDARG00000021556 1210 1.678 - - - 0.760 - - - - 0.918 ubiquitin-like 3b [Source:ZFIN;Acc:ZDB-GENE-040630-4]
43. psmd7 ENSDARG00000102417 4732 1.677 - 0.769 - - - - 0.908 - - proteasome 26S subunit, non-ATPase 7 [Source:ZFIN;Acc:ZDB-GENE-030131-5541]
44. mycbp2 ENSDARG00000001220, ENSDARG00000113355 3417 1.674 - 0.770 - - - - 0.904 - - MYC binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030616-132]
45. als2b ENSDARG00000076924 738 1.672 - - - 0.748 - - - - 0.924 amyotrophic lateral sclerosis 2b (juvenile) [Source:ZFIN;Acc:ZDB-GENE-080929-1]
46. prr12a ENSDARG00000074229 1668 1.672 - - - 0.846 - - - - 0.826 proline rich 12a [Source:ZFIN;Acc:ZDB-GENE-041111-223]
47. FBXL3 FBXL3 1769 1.671 - - - 0.798 - - - - 0.873
48. sdad1 ENSDARG00000105117 2819 1.67 - - - 0.759 - - - - 0.911 SDA1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-021213-1]
49. ints8 ENSDARG00000057986 1063 1.665 - - - - - 0.733 - - 0.932 integrator complex subunit 8 [Source:ZFIN;Acc:ZDB-GENE-050522-556]
50. scaf11 ENSDARG00000045885 3531 1.664 - 0.717 - - - - 0.947 - - SR-related CTD-associated factor 11 [Source:ZFIN;Acc:ZDB-GENE-041210-22]
51. zdhhc17 ENSDARG00000070441 1073 1.661 - - - 0.775 - - - - 0.886 zinc finger, DHHC-type containing 17 [Source:ZFIN;Acc:ZDB-GENE-070424-194]
52. ttc14 ENSDARG00000013845 1192 1.659 - - - 0.782 - - - - 0.877 tetratricopeptide repeat domain 14 [Source:ZFIN;Acc:ZDB-GENE-050327-26]
53. eef2a.1 ENSDARG00000042094 1781 1.658 - 0.704 - - - - - - 0.954 eukaryotic translation elongation factor 2a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050522-500]
54. cwc25 ENSDARG00000003382 2134 1.652 - - - 0.777 - - - - 0.875 CWC25 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2817]
55. mst4 mst4 1672 1.631 - 0.825 - 0.806 - - - - -
56. emc6 ENSDARG00000035282 4981 1.628 - 0.744 - - - - 0.884 - - ER membrane protein complex subunit 6 [Source:ZFIN;Acc:ZDB-GENE-030131-9164]
57. bahcc1 bahcc1 1934 1.619 - - - 0.703 - - - - 0.916
58. stard8 ENSDARG00000014003, ENSDARG00000114410 1237 1.615 - 0.713 - - - - - - 0.902 StAR-related lipid transfer (START) domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-030131-9447]
59. spryd7a ENSDARG00000052624 1059 1.614 - 0.731 - - - - - - 0.883 SPRY domain containing 7a [Source:ZFIN;Acc:ZDB-GENE-040426-2713]
60. ppig ENSDARG00000044431 3427 1.607 - 0.792 - 0.815 - - - - - peptidylprolyl isomerase G (cyclophilin G) [Source:ZFIN;Acc:ZDB-GENE-040426-2822]
61. gatad2ab ENSDARG00000006192 2461 1.6 - - - 0.841 - - - - 0.759 GATA zinc finger domain containing 2Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2372]
62. trub2 ENSDARG00000028379 783 1.597 - - - 0.861 - - - 0.736 - TruB pseudouridine (psi) synthase family member 2 [Source:ZFIN;Acc:ZDB-GENE-040704-41]
63. sptlc2b ENSDARG00000074287 1853 1.596 - - - 0.746 - - - - 0.850 serine palmitoyltransferase, long chain base subunit 2b [Source:ZFIN;Acc:ZDB-GENE-080305-8]
64. DLC1 ENSDARG00000079317 2149 1.595 - - - 0.743 - - - - 0.852 DLC1 Rho GTPase activating protein [Source:ZFIN;Acc:ZDB-GENE-130206-12]
65. cdc42 ENSDARG00000044573 11795 1.57 - 0.717 - - - - 0.853 - - cell division cycle 42 [Source:ZFIN;Acc:ZDB-GENE-030131-8783]
66. igf2bp3 ENSDARG00000010266 5789 1.566 - - - 0.702 - - 0.864 - - insulin-like growth factor 2 mRNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-000308-1]
67. KRT18 ENSDARG00000018404, ENSDARG00000109528 6022 1.553 - 0.717 - - - - - - 0.836 keratin 18 [Source:ZFIN;Acc:ZDB-GENE-030411-6]
68. ptpn23a ENSDARG00000070124 1206 1.552 - 0.761 - 0.791 - - - - - protein tyrosine phosphatase, non-receptor type 23, a [Source:ZFIN;Acc:ZDB-GENE-100921-24]
69. dpf2 ENSDARG00000012219 666 1.526 - - - 0.798 - - - 0.728 - D4, zinc and double PHD fingers family 2 [Source:ZFIN;Acc:ZDB-GENE-041024-2]
70. RNASEH2C ENSDARG00000089637 1673 1.515 - - - 0.703 - - - - 0.812 ribonuclease H2, subunit C [Source:ZFIN;Acc:ZDB-GENE-030131-2469]
71. TCEB3 2429 1.503 - 0.724 - - - - - - 0.779 transcription elongation factor B (SIII), polypeptide 3
72. slc37a4b ENSDARG00000077180, ENSDARG00000093531 565 1.501 - - - 0.745 - - - 0.756 - solute carrier family 37 (glucose-6-phosphate transporter), member 4b [Source:ZFIN;Acc:ZDB-GENE-040426-827]
73. znf207a ENSDARG00000015538 2630 1.498 - - - - - 0.758 - - 0.740 zinc finger protein 207, a [Source:ZFIN;Acc:ZDB-GENE-040426-2273]
74. hnrnpd ENSDARG00000059246, ENSDARG00000109297, ENSDARG00000113453 3440 1.498 - 0.740 - - - - - - 0.758 heterogeneous nuclear ribonucleoprotein D [Source:ZFIN;Acc:ZDB-GENE-070424-97]
75. tfdp1a ENSDARG00000019293, ENSDARG00000111589 1118 1.481 - - - - - 0.733 - 0.748 - transcription factor Dp-1, a [Source:ZFIN;Acc:ZDB-GENE-040426-2883]
76. plagx ENSDARG00000036855 3768 1.473 - - - 0.760 - - - - 0.713 pleiomorphic adenoma gene X [Source:ZFIN;Acc:ZDB-GENE-030131-839]
77. rc3h1 rc3h1 1087 1.471 - 0.741 - - - - - 0.730 -
78. rgs20 ENSDARG00000038859 331 1.47 - - - 0.729 - - - 0.741 - regulator of G protein signaling 20 [Source:ZFIN;Acc:ZDB-GENE-040718-128]
79. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 1.464 - - - 0.751 - - - - 0.713 POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
80. vrk1 ENSDARG00000018006 1759 1.446 - 0.715 - 0.731 - - - - - vaccinia related kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2709]
81. sf3a1 ENSDARG00000041887 6702 1.429 0.708 - - - - 0.721 - - - splicing factor 3a, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030616-156]
82. PRKD3 ENSDARG00000079967 192 0.994 - - - - - - 0.994 - - protein kinase D3 [Source:ZFIN;Acc:ZDB-GENE-130530-880]
83. TMEM184B TMEM184B 1280 0.993 - - - - - - 0.993 - -
84. si:ch211-51o18.2 si:ch211-51o18.2 111 0.993 - - - - - - 0.993 - -
85. zdhhc5a ENSDARG00000016263 625 0.993 - - - - - - 0.993 - - zinc finger, DHHC-type containing 5a [Source:ZFIN;Acc:ZDB-GENE-090312-92]
86. usp43a ENSDARG00000103494, ENSDARG00000111546, ENSDARG00000112146 211 0.993 - - - - - - 0.993 - - ubiquitin specific peptidase 43a [Source:ZFIN;Acc:ZDB-GENE-100211-1]
87. kdm5ba ENSDARG00000057093, ENSDARG00000111539 3302 0.993 - - - - - - 0.993 - - lysine (K)-specific demethylase 5Ba [Source:ZFIN;Acc:ZDB-GENE-030131-5379]
88. dhodh ENSDARG00000051889 401 0.992 - - - - - - 0.992 - - dihydroorotate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030131-3157]
89. znf687a ENSDARG00000102774 393 0.992 - - - - - - 0.992 - - zinc finger protein 687a [Source:ZFIN;Acc:ZDB-GENE-100922-32]
90. pan3 ENSDARG00000031637, ENSDARG00000111004 613 0.992 - - - - - - 0.992 - - poly(A) specific ribonuclease subunit PAN3 [Source:ZFIN;Acc:ZDB-GENE-070928-13]
91. OCRL ENSDARG00000078106, ENSDARG00000115715, ENSDARG00000117019 317 0.992 - - - - - - 0.992 - - oculocerebrorenal syndrome of Lowe [Source:ZFIN;Acc:ZDB-GENE-061110-61]
92. esyt3 ENSDARG00000006422 335 0.992 - - - - - - 0.992 - - extended synaptotagmin-like protein 3 [Source:ZFIN;Acc:ZDB-GENE-050809-35]
93. PSD PSD 367 0.992 - - - - - - 0.992 - -
94. timm10b ENSDARG00000043898 1233 0.992 - - - - - - 0.992 - - translocase of inner mitochondrial membrane 10 homolog B (yeast) [Source:ZFIN;Acc:ZDB-GENE-050417-370]
95. PDZD8 ENSDARG00000088699 844 0.992 - - - - - - 0.992 - - PDZ domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-110310-2]
96. EXO5 ENSDARG00000042727, ENSDARG00000111772 282 0.992 - - - - - - 0.992 - - exonuclease 5 [Source:ZFIN;Acc:ZDB-GENE-051113-108]
97. kbtbd7 ENSDARG00000078001 367 0.992 - - - - - - 0.992 - - kelch repeat and BTB (POZ) domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-070912-204]
98. SLITRK6 ENSDARG00000098769 217 0.992 - - - - - - 0.992 - - SLIT and NTRK-like family, member 6 [Source:ZFIN;Acc:ZDB-GENE-030131-2816]
99. plekhh1 ENSDARG00000053835 2123 0.992 - - - - - - 0.992 - - pleckstrin homology domain containing, family H (with MyTH4 domain) member 1 [Source:ZFIN;Acc:ZDB-GENE-061219-1]
100. tmco3 ENSDARG00000075108 368 0.991 - - - - - - 0.991 - - transmembrane and coiled-coil domains 3 [Source:ZFIN;Acc:ZDB-GENE-071030-1]

There are 1590 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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