Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for tsr3

Gene Name Gene ID Reads Annotation
tsr3 ENSDARG00000038567 436 TSR3, 20S rRNA accumulation, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040718-63]










Genes with expression patterns similar to tsr3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tsr3 ENSDARG00000038567 436 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 TSR3, 20S rRNA accumulation, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040718-63]
2. ngdn ENSDARG00000045372 782 1.5 - 0.737 - - - - 0.763 - - neuroguidin, EIF4E binding protein [Source:ZFIN;Acc:ZDB-GENE-031030-13]
3. mkxa ENSDARG00000075450, ENSDARG00000114299 233 1.495 - - 0.780 - - 0.715 - - - mohawk homeobox a [Source:ZFIN;Acc:ZDB-GENE-080513-1]
4. CU462878.1 ENSDARG00000090072 352 1.493 - - - 0.725 - 0.768 - - - keratinocyte associated protein 3 [Source:NCBI gene;Acc:100538219]
5. fut8 fut8 652 1.46 0.722 - - - - - 0.738 - -
6. yrk ENSDARG00000004378 618 1.422 - 0.709 - 0.713 - - - - - Yes-related kinase [Source:ZFIN;Acc:ZDB-GENE-030131-9517]
7. foxp2 ENSDARG00000005453 1504 1.403 - - - - - 0.702 0.701 - - forkhead box P2 [Source:ZFIN;Acc:ZDB-GENE-041203-2]
8. mir148 75 0.892 - - - - - 0.892 - - - microRNA 148
9. ARHGAP32 ARHGAP32 670 0.863 - - - - - - 0.863 - -
10. fgf17 ENSDARG00000102778 136 0.863 - - - 0.863 - - - - - fibroblast growth factor 17 [Source:ZFIN;Acc:ZDB-GENE-040621-1]
11. REXO4 ENSDARG00000088619 655 0.855 - - - - - - 0.855 - - REX4 homolog, 3'-5' exonuclease [Source:ZFIN;Acc:ZDB-GENE-050411-124]
12. rnd2 ENSDARG00000070735, ENSDARG00000114884 291 0.848 - - - - - - 0.848 - - Rho family GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-030616-177]
13. p2rx5 ENSDARG00000004455, ENSDARG00000112664 309 0.843 - - - - - 0.843 - - - purinergic receptor P2X, ligand-gated ion channel, 5 [Source:ZFIN;Acc:ZDB-GENE-030319-5]
14. rdh12 ENSDARG00000018069 396 0.837 - - - 0.837 - - - - - retinol dehydrogenase 12 [Source:ZFIN;Acc:ZDB-GENE-040718-9]
15. hsh2d ENSDARG00000042908, ENSDARG00000110717 91 0.833 - - - - - - 0.833 - - hematopoietic SH2 domain containing [Source:ZFIN;Acc:ZDB-GENE-050410-3]
16. CLDN23 CLDN23 2002 0.83 - - - 0.830 - - - - -
17. ctsk ENSDARG00000040251 1111 0.83 - 0.830 - - - - - - - cathepsin K [Source:ZFIN;Acc:ZDB-GENE-001205-4]
18. ARHGEF25 ARHGEF25 1159 0.827 - - - - - - 0.827 - -
19. taf7 ENSDARG00000019572 1305 0.827 - 0.827 - - - - - - - TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-020419-18]
20. dip2a ENSDARG00000078058 1625 0.826 - - - - - - 0.826 - - disco-interacting protein 2 homolog A [Source:ZFIN;Acc:ZDB-GENE-091204-2]
21. musk ENSDARG00000098764 438 0.825 - - - - - 0.825 - - - muscle, skeletal, receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-030131-6458]
22. fhl3b ENSDARG00000104315 359 0.824 - - - 0.824 - - - - - four and a half LIM domains 3b [Source:ZFIN;Acc:ZDB-GENE-030131-8356]
23. zfr2 ENSDARG00000071683 780 0.823 - - - - - - 0.823 - - zinc finger RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-070705-184]
24. TMEM138 ENSDARG00000090543 105 0.82 0.820 - - - - - - - - transmembrane protein 138 [Source:ZFIN;Acc:ZDB-GENE-120912-1]
25. ptrfa ptrfa 4363 0.82 - - - - - 0.820 - - -
26. tuft1b ENSDARG00000071010 909 0.812 - 0.812 - - - - - - - tuftelin 1b [Source:ZFIN;Acc:ZDB-GENE-060503-150]
27. arih1l ENSDARG00000036870, ENSDARG00000112965 82 0.806 - - - - - 0.806 - - - ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 like [Source:ZFIN;Acc:ZDB-GENE-040426-2395]
28. klhl38 klhl38 44 0.802 - - - - - 0.802 - - -
29. C8H5orf51 C8H5orf51 1199 0.802 - 0.802 - - - - - - -
30. gtf3aa ENSDARG00000030267 217 0.801 - - - 0.801 - - - - - general transcription factor IIIAa [Source:ZFIN;Acc:ZDB-GENE-041006-1]
31. kif5bb 1645 0.8 - 0.800 - - - - - - - kinesin family member 5B, b
32. hsp90aa1.2 ENSDARG00000024746 5210 0.796 - - - - - - 0.796 - - heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-031001-3]
33. znf438 ENSDARG00000061311 524 0.796 - - - - - - 0.796 - - zinc finger protein 438 [Source:ZFIN;Acc:ZDB-GENE-060929-868]
34. im:7149628 im:7149628 10 0.795 - - - - - 0.795 - - -
35. gopc ENSDARG00000023117 1206 0.793 - - - - - - 0.793 - - golgi-associated PDZ and coiled-coil motif containing [Source:ZFIN;Acc:ZDB-GENE-030131-5086]
36. prox1a ENSDARG00000055158 1411 0.793 - 0.793 - - - - - - - prospero homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-397]
37. NTAN1 ENSDARG00000105182 844 0.793 - - - 0.793 - - - - - N-terminal asparagine amidase [Source:ZFIN;Acc:ZDB-GENE-040426-1896]
38. RNASEH2C ENSDARG00000089637 1673 0.792 - 0.792 - - - - - - - ribonuclease H2, subunit C [Source:ZFIN;Acc:ZDB-GENE-030131-2469]
39. rnf24 ENSDARG00000036965 226 0.792 - - - - - - 0.792 - - ring finger protein 24 [Source:ZFIN;Acc:ZDB-GENE-041114-40]
40. zswim5 ENSDARG00000055900 4243 0.791 - - - - - - 0.791 - - zinc finger, SWIM-type containing 5 [Source:ZFIN;Acc:ZDB-GENE-030925-30]
41. eif4a2 ENSDARG00000016477 665 0.791 - - - - - - 0.791 - - eukaryotic translation initiation factor 4A, isoform 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2802]
42. CREBZF ENSDARG00000089787 4261 0.789 - 0.789 - - - - - - - CREB/ATF bZIP transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-8015]
43. prkag3b ENSDARG00000000369 1945 0.788 - - - - - 0.788 - - - protein kinase, AMP-activated, gamma 3b non-catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-060421-6938]
44. PTGES3L PTGES3L 4801 0.788 - - - - - 0.788 - - -
45. meox1 ENSDARG00000007891, ENSDARG00000115382 1584 0.788 - - - - - 0.788 - - - mesenchyme homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040718-149]
46. NHSL2 ENSDARG00000089066 374 0.787 - - - - - 0.787 - - - NHS-like 2 [Source:ZFIN;Acc:ZDB-GENE-130530-951]
47. rfx2 ENSDARG00000013575 1275 0.787 - - - 0.787 - - - - - regulatory factor X, 2 (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-050227-4]
48. grem2 grem2 743 0.786 - - - - - 0.786 - - -
49. si:ch73-46j18.5 ENSDARG00000092467 6002 0.784 - 0.784 - - - - - - - si:ch73-46j18.5 [Source:ZFIN;Acc:ZDB-GENE-030131-7892]
50. rxrbb ENSDARG00000002006, ENSDARG00000117079 1975 0.783 - - - 0.783 - - - - - retinoid x receptor, beta b [Source:ZFIN;Acc:ZDB-GENE-990415-242]
51. slc30a9 ENSDARG00000057272 766 0.783 - - - - - 0.783 - - - solute carrier family 30 (zinc transporter), member 9 [Source:ZFIN;Acc:ZDB-GENE-040724-254]
52. ticrr ENSDARG00000045605 739 0.781 - - - - - - 0.781 - - TopBP1-interacting, checkpoint, and replication regulator [Source:ZFIN;Acc:ZDB-GENE-040728-1]
53. eed ENSDARG00000099640 143 0.78 - - - - - - 0.780 - - embryonic ectoderm development [Source:ZFIN;Acc:ZDB-GENE-050417-287]
54. snrkb ENSDARG00000017665 221 0.779 - - - - - 0.779 - - - SNF related kinase b [Source:ZFIN;Acc:ZDB-GENE-040426-1724]
55. BX322601.2 BX322601.2 297 0.779 - - - 0.779 - - - - -
56. dnajc5ga ENSDARG00000041896 1478 0.778 - - - - - - 0.778 - - DnaJ (Hsp40) homolog, subfamily C, member 5 gamma a [Source:ZFIN;Acc:ZDB-GENE-030131-1583]
57. CABZ01003826.1 CABZ01003826.1 486 0.777 - - - 0.777 - - - - -
58. CR383676.3_1 CR383676.3_1 177 0.776 - - - - - - 0.776 - -
59. casc4 ENSDARG00000074490 2019 0.775 - - - 0.775 - - - - - cancer susceptibility candidate 4 [Source:ZFIN;Acc:ZDB-GENE-091130-1]
60. prkcsh ENSDARG00000004470 1424 0.774 - - - - - - 0.774 - - protein kinase C substrate 80K-H [Source:ZFIN;Acc:ZDB-GENE-040426-770]
61. rpf2 ENSDARG00000043960 2719 0.774 - - - - - - 0.774 - - ribosome production factor 2 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2501]
62. NFRKB ENSDARG00000091512 646 0.774 - - - 0.774 - - - - - nuclear factor related to kappaB binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-6419]
63. arpp21 ENSDARG00000061081 892 0.774 - - - - - - 0.774 - - cAMP-regulated phosphoprotein, 21 [Source:ZFIN;Acc:ZDB-GENE-081104-296]
64. foxp4 ENSDARG00000076120 9458 0.773 - 0.773 - - - - - - - forkhead box P4 [Source:ZFIN;Acc:ZDB-GENE-101207-1]
65. uggt2 ENSDARG00000062089 661 0.773 - - - - - - 0.773 - - UDP-glucose glycoprotein glucosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050517-21]
66. mafba ENSDARG00000017121 1215 0.773 - 0.773 - - - - - - - v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog Ba [Source:ZFIN;Acc:ZDB-GENE-980526-515]
67. ttc7b ENSDARG00000061207 710 0.772 - - - - - - 0.772 - - tetratricopeptide repeat domain 7B [Source:ZFIN;Acc:ZDB-GENE-070105-3]
68. KDM4A KDM4A 372 0.772 - - - - - - 0.772 - -
69. STXBP6 ENSDARG00000088862 988 0.77 - - - 0.770 - - - - - syntaxin binding protein 6 (amisyn) [Source:ZFIN;Acc:ZDB-GENE-040625-31]
70. zgc:112998 ENSDARG00000079760 380 0.769 - - - - - - 0.769 - - zgc:112998 [Source:ZFIN;Acc:ZDB-GENE-050320-134]
71. plk2b ENSDARG00000019130, ENSDARG00000111402 328 0.769 - - 0.769 - - - - - - polo-like kinase 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070720-17]
72. nap1l1 ENSDARG00000101813 819 0.768 - - - - - 0.768 - - - nucleosome assembly protein 1-like 1 [Source:ZFIN;Acc:ZDB-GENE-030516-2]
73. MRPS12_1 MRPS12_1 2714 0.768 - - - - - 0.768 - - -
74. TMEM131 ENSDARG00000056259, ENSDARG00000114857 1073 0.767 - 0.767 - - - - - - - transmembrane protein 131 [Source:ZFIN;Acc:ZDB-GENE-130530-662]
75. bcmo1a bcmo1a 402 0.767 - - - 0.767 - - - - -
76. kcnk18 ENSDARG00000057049, ENSDARG00000110571, ENSDARG00000112385 118 0.767 - - - - - - 0.767 - - potassium channel, subfamily K, member 18 [Source:ZFIN;Acc:ZDB-GENE-100405-2]
77. crnkl1 ENSDARG00000007901 1952 0.767 - - - - - - 0.767 - - crooked neck pre-mRNA splicing factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-694]
78. si:ch211-127i16.2 ENSDARG00000092976, ENSDARG00000116049 152 0.766 - - - - - - 0.766 - - si:ch211-127i16.2 [Source:ZFIN;Acc:ZDB-GENE-091204-54]
79. mbd6 ENSDARG00000086980 655 0.766 - - - 0.766 - - - - - methyl-CpG binding domain protein 6 [Source:ZFIN;Acc:ZDB-GENE-041027-3]
80. ppifa ENSDARG00000007409 185 0.765 - - - - - - 0.765 - - peptidylprolyl isomerase Fa [Source:ZFIN;Acc:ZDB-GENE-040912-52]
81. ctu1 ENSDARG00000020986 135 0.764 - - - - - 0.764 - - - cytosolic thiouridylase subunit 1 homolog (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-040426-704]
82. mettl11b ENSDARG00000042033 176 0.764 - - - - - - 0.764 - - methyltransferase like 11B [Source:ZFIN;Acc:ZDB-GENE-081104-175]
83. wu:fc32g12 wu:fc32g12 198 0.764 - - - - - - 0.764 - -
84. fxr2 ENSDARG00000016260, ENSDARG00000116730 10030 0.763 - - - - - 0.763 - - - fragile X mental retardation, autosomal homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-943]
85. tex10 ENSDARG00000055885 1229 0.762 - 0.762 - - - - - - - testis expressed 10 [Source:ZFIN;Acc:ZDB-GENE-040426-2827]
86. pnisr ENSDARG00000069855, ENSDARG00000116449 3465 0.762 - 0.762 - - - - - - - PNN-interacting serine/arginine-rich protein [Source:ZFIN;Acc:ZDB-GENE-030131-362]
87. pgm2l1 ENSDARG00000014704 140 0.761 - - - - - - 0.761 - - phosphoglucomutase 2-like 1 [Source:ZFIN;Acc:ZDB-GENE-041008-205]
88. hs6st1b ENSDARG00000071501, ENSDARG00000116688 843 0.761 - - - - - - 0.761 - - heparan sulfate 6-O-sulfotransferase 1b [Source:ZFIN;Acc:ZDB-GENE-070103-2]
89. dnajc1 ENSDARG00000001940 2848 0.761 - - - - - 0.761 - - - DnaJ (Hsp40) homolog, subfamily C, member 1 [Source:ZFIN;Acc:ZDB-GENE-061103-529]
90. jph1a ENSDARG00000058603 2852 0.759 - - - - - 0.759 - - - junctophilin 1a [Source:ZFIN;Acc:ZDB-GENE-040724-233]
91. SNORD18 SNORD18 175 0.759 - - - - - 0.759 - - -
92. trim101 ENSDARG00000018264 827 0.759 - - - - - 0.759 - - - tripartite motif containing 101 [Source:ZFIN;Acc:ZDB-GENE-040801-100]
93. yme1l1a ENSDARG00000075192 2634 0.758 - - - - - - 0.758 - - YME1-like 1a [Source:ZFIN;Acc:ZDB-GENE-091113-41]
94. SNX20 ENSDARG00000045554 77 0.758 - - - - - 0.758 - - - sorting nexin 20 [Source:ZFIN;Acc:ZDB-GENE-100806-1]
95. med13a ENSDARG00000053884, ENSDARG00000112778 931 0.758 - - - - - - 0.758 - - mediator complex subunit 13a [Source:ZFIN;Acc:ZDB-GENE-070627-13]
96. slc16a9b ENSDARG00000104687 826 0.758 - 0.758 - - - - - - - solute carrier family 16, member 9b [Source:ZFIN;Acc:ZDB-GENE-040801-69]
97. rbm25 rbm25 3629 0.758 - 0.758 - - - - - - -
98. CPEB4 CPEB4 3249 0.757 - - - - - - 0.757 - -
99. NRD1 NRD1 3486 0.757 - - - - - 0.757 - - -
100. chd4b ENSDARG00000025789 14299 0.757 - 0.757 - - - - - - - chromodomain helicase DNA binding protein 4b [Source:ZFIN;Acc:ZDB-GENE-030131-4532]

There are 290 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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