Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for tspan9b

Gene Name Gene ID Reads Annotation
tspan9b ENSDARG00000045706, ENSDARG00000110620, ENSDARG00000111048 2161 tetraspanin 9b [Source:ZFIN;Acc:ZDB-GENE-040704-25]










Genes with expression patterns similar to tspan9b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tspan9b ENSDARG00000045706, ENSDARG00000110620, ENSDARG00000111048 2161 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 tetraspanin 9b [Source:ZFIN;Acc:ZDB-GENE-040704-25]
2. mrps23 ENSDARG00000033973 2265 2.547 - - - - 0.810 0.982 0.755 - - mitochondrial ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-040801-134]
3. TTYH3 TTYH3 1841 1.841 - - - - 0.850 0.991 - - -
4. MON1B_1 MON1B_1 697 1.841 - - - - 0.848 0.993 - - -
5. peli2 ENSDARG00000029045 844 1.835 - - - - 0.842 0.993 - - - pellino E3 ubiquitin protein ligase family member 2 [Source:ZFIN;Acc:ZDB-GENE-040718-360]
6. mtmr2 ENSDARG00000004616 1052 1.832 - - - - 0.840 0.992 - - - myotubularin related protein 2 [Source:ZFIN;Acc:ZDB-GENE-990715-14]
7. tmed7 ENSDARG00000046022 2435 1.827 - 0.838 - - - 0.989 - - - transmembrane p24 trafficking protein 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2570]
8. ppp1r14aa ENSDARG00000011239 980 1.817 - - - - 0.836 0.981 - - - protein phosphatase 1, regulatory (inhibitor) subunit 14Aa [Source:ZFIN;Acc:ZDB-GENE-050417-413]
9. gpx1a ENSDARG00000018146, ENSDARG00000114736 4652 1.803 - - - - 0.819 0.984 - - - glutathione peroxidase 1a [Source:ZFIN;Acc:ZDB-GENE-030410-1]
10. foxq1b ENSDARG00000055395 549 1.794 - - - - - 0.981 - 0.813 - forkhead box Q1b [Source:ZFIN;Acc:ZDB-GENE-040426-2090]
11. SLC25A22 2190 1.756 - - - - 0.774 0.982 - - - solute carrier family 25 (mitochondrial carrier: glutamate), member 22, transcript variant X2
12. smarcb1a ENSDARG00000033647, ENSDARG00000111561 3528 1.752 - - - - 0.759 0.993 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1a [Source:ZFIN;Acc:ZDB-GENE-041114-5]
13. cacybp ENSDARG00000014731 2650 1.746 - - - - 0.765 0.981 - - - calcyclin binding protein [Source:ZFIN;Acc:ZDB-GENE-040426-2579]
14. gspt1l ENSDARG00000098627 8381 1.745 - 0.777 - - - 0.968 - - - G1 to S phase transition 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-4009]
15. ptplad1 ptplad1 1084 1.717 - - - - - 0.986 - 0.731 -
16. wu:fq41a10 wu:fq41a10 7009 1.71 - - - - 0.796 0.914 - - -
17. gsk3b ENSDARG00000017803 3438 1.697 0.913 - - - 0.784 - - - - glycogen synthase kinase 3 beta [Source:ZFIN;Acc:ZDB-GENE-990714-4]
18. SNORA21 SNORA21 547 1.693 - - - - - 0.990 - 0.703 -
19. arpc3 ENSDARG00000057882 10113 1.687 - - - - 0.814 0.873 - - - actin related protein 2/3 complex, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040625-107]
20. mob4 ENSDARG00000056085 17978 1.686 - 0.728 - - - 0.958 - - - MOB family member 4, phocein [Source:ZFIN;Acc:ZDB-GENE-040801-174]
21. SERP1_1 ENSDARG00000076223 6668 1.677 - 0.741 - - - 0.936 - - - stress associated endoplasmic reticulum protein 1 [Source:HGNC Symbol;Acc:HGNC:10759]
22. cnot6l ENSDARG00000054597, ENSDARG00000112672 1586 1.674 - - - - - 0.969 0.705 - - CCR4-NOT transcription complex, subunit 6-like [Source:ZFIN;Acc:ZDB-GENE-050522-302]
23. robo3 ENSDARG00000005645 2818 1.671 - 0.731 - - - 0.940 - - - roundabout, axon guidance receptor, homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-000209-4]
24. zgc:92107 ENSDARG00000044874, ENSDARG00000115497 5938 1.67 - - - - - 0.965 - - 0.705 zgc:92107 [Source:ZFIN;Acc:ZDB-GENE-041114-4]
25. tp63 ENSDARG00000044356, ENSDARG00000113627 5686 1.644 - - - - 0.724 0.920 - - - tumor protein p63 [Source:ZFIN;Acc:ZDB-GENE-030819-1]
26. txndc9 ENSDARG00000069853, ENSDARG00000110688 1519 1.644 - - - - 0.898 - 0.746 - - thioredoxin domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-030131-8569]
27. C1QBP ENSDARG00000039887 11186 1.642 - - - - - 0.909 0.733 - - complement component 1, q subcomponent binding protein [Source:ZFIN;Acc:ZDB-GENE-050417-408]
28. gfpt2 ENSDARG00000044094 2503 1.623 - - - - 0.727 0.896 - - - glutamine-fructose-6-phosphate transaminase 2 [Source:ZFIN;Acc:ZDB-GENE-071113-1]
29. hsd17b12a ENSDARG00000015709 2499 1.62 - 0.715 - - - 0.905 - - - hydroxysteroid (17-beta) dehydrogenase 12a [Source:ZFIN;Acc:ZDB-GENE-030131-5628]
30. AGAP1 ENSDARG00000062123, ENSDARG00000113863 2842 1.593 0.780 - - - 0.813 - - - - ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 [Source:ZFIN;Acc:ZDB-GENE-130405-1]
31. ftr67 ENSDARG00000098820 611 1.582 - - - - 0.827 - 0.755 - - finTRIM family, member 67 [Source:ZFIN;Acc:ZDB-GENE-060312-27]
32. usp25 ENSDARG00000012314 734 1.581 - - - - 0.831 - - 0.750 - ubiquitin specific peptidase 25 [Source:ZFIN;Acc:ZDB-GENE-040426-2847]
33. mybbp1a ENSDARG00000078214 2458 1.575 - - - - 0.812 - 0.763 - - MYB binding protein (P160) 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9864]
34. fermt1 ENSDARG00000052652 2394 1.574 - 0.734 - - 0.840 - - - - fermitin family member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3264]
35. WDR53 ENSDARG00000079659 485 1.541 0.780 - - - - - - 0.761 - WD repeat domain 53 [Source:ZFIN;Acc:ZDB-GENE-131121-294]
36. thy1 ENSDARG00000035018, ENSDARG00000112392, ENSDARG00000112677 9697 1.536 - 0.713 - - - 0.823 - - - Thy-1 cell surface antigen [Source:ZFIN;Acc:ZDB-GENE-030131-8561]
37. prkar1aa ENSDARG00000076128 6565 1.528 - - - - 0.718 - - - 0.810 protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1) a [Source:ZFIN;Acc:ZDB-GENE-050116-2]
38. fam13a ENSDARG00000075564 1905 1.525 - - - - 0.823 - 0.702 - - family with sequence similarity 13, member A [Source:ZFIN;Acc:ZDB-GENE-050208-102]
39. grwd1 ENSDARG00000004806, ENSDARG00000109608 1567 1.524 - - - - - - - 0.784 0.740 glutamate-rich WD repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9844]
40. tmco1 ENSDARG00000069099, ENSDARG00000113013 4698 1.523 - 0.821 - - 0.702 - - - - transmembrane and coiled-coil domains 1 [Source:ZFIN;Acc:ZDB-GENE-050417-344]
41. mycbp ENSDARG00000091001 1511 1.518 - - - - 0.782 - 0.736 - - c-myc binding protein [Source:ZFIN;Acc:ZDB-GENE-060331-97]
42. mrpl23 ENSDARG00000045696, ENSDARG00000111947 4333 1.516 0.733 - - - - - 0.783 - - mitochondrial ribosomal protein L23 [Source:ZFIN;Acc:ZDB-GENE-040625-12]
43. immp2l ENSDARG00000004925 215 1.512 0.738 - - - - - - 0.774 - inner mitochondrial membrane peptidase subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040808-9]
44. myo1b ENSDARG00000024694 1761 1.508 0.770 - - - - - 0.738 - - myosin IB [Source:ZFIN;Acc:ZDB-GENE-030131-695]
45. ccnf ENSDARG00000105046 1790 1.497 - - - - 0.758 - - - 0.739 cyclin F [Source:ZFIN;Acc:ZDB-GENE-021030-2]
46. snx27a ENSDARG00000033804 2249 1.48 - - - - 0.768 - 0.712 - - sorting nexin family member 27a [Source:ZFIN;Acc:ZDB-GENE-060503-371]
47. psmb7 ENSDARG00000037962 11542 1.477 - 0.772 - - - - 0.705 - - proteasome subunit beta 7 [Source:ZFIN;Acc:ZDB-GENE-001208-4]
48. pcca ENSDARG00000028982, ENSDARG00000110281 3212 1.472 - - - - 0.746 - 0.726 - - propionyl-CoA carboxylase subunit alpha [Source:ZFIN;Acc:ZDB-GENE-040718-246]
49. bmpr2a ENSDARG00000011941 2972 1.438 - - - - 0.716 - 0.722 - - bone morphogenetic protein receptor, type II a (serine/threonine kinase) [Source:ZFIN;Acc:ZDB-GENE-070618-1]
50. scoca ENSDARG00000087333 1739 1.418 0.709 - - - - - 0.709 - - short coiled-coil protein a [Source:ZFIN;Acc:ZDB-GENE-061013-114]
51. MRPL21 ENSDARG00000003846 3244 1.418 - - - - 0.704 - 0.714 - - mitochondrial ribosomal protein L21 [Source:ZFIN;Acc:ZDB-GENE-061027-183]
52. pigs ENSDARG00000017813 718 0.994 - - - - - 0.994 - - - phosphatidylinositol glycan anchor biosynthesis, class S [Source:ZFIN;Acc:ZDB-GENE-060929-436]
53. rbm15 ENSDARG00000073847, ENSDARG00000110499 1307 0.994 - - - - - 0.994 - - - RNA binding motif protein 15 [Source:ZFIN;Acc:ZDB-GENE-041008-192]
54. trim33 ENSDARG00000016181 1718 0.993 - - - - - 0.993 - - - tripartite motif containing 33 [Source:ZFIN;Acc:ZDB-GENE-030131-2773]
55. mier1a ENSDARG00000041072 1690 0.993 - - - - - 0.993 - - - mesoderm induction early response 1a, transcriptional regulator [Source:ZFIN;Acc:ZDB-GENE-030131-409]
56. eif6 ENSDARG00000020232 2744 0.993 - - - - - 0.993 - - - eukaryotic translation initiation factor 6 [Source:ZFIN;Acc:ZDB-GENE-031118-110]
57. si:dkey-9i23.16 ENSDARG00000093954 929 0.992 - - - - - 0.992 - - - si:dkey-9i23.16 [Source:ZFIN;Acc:ZDB-GENE-090313-362]
58. ssu72 ENSDARG00000031216 2350 0.992 - - - - - 0.992 - - - SSU72 homolog, RNA polymerase II CTD phosphatase [Source:ZFIN;Acc:ZDB-GENE-040426-1689]
59. txnl4a ENSDARG00000036190 2048 0.992 - - - - - 0.992 - - - thioredoxin-like 4A [Source:ZFIN;Acc:ZDB-GENE-041010-25]
60. fam21c 1768 0.992 - - - - - 0.992 - - - family with sequence similarity 21, member C, transcript variant X6
61. PHYHIP ENSDARG00000116497 456 0.992 - - - - - 0.992 - - - phytanoyl-CoA 2-hydroxylase interacting protein [Source:NCBI gene;Acc:100002455]
62. cyp20a1 ENSDARG00000006040 2570 0.992 - - - - - 0.992 - - - cytochrome P450, family 20, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2646]
63. smim7 ENSDARG00000074848 1260 0.992 - - - - - 0.992 - - - small integral membrane protein 7 [Source:ZFIN;Acc:ZDB-GENE-060810-180]
64. ints2 ENSDARG00000069085, ENSDARG00000101876 1249 0.992 - - - - - 0.992 - - - integrator complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050522-148]
65. rnf13 ENSDARG00000019438 1560 0.992 - - - - - 0.992 - - - ring finger protein 13 [Source:ZFIN;Acc:ZDB-GENE-040426-772]
66. RAB11FIP5 RAB11FIP5 626 0.992 - - - - - 0.992 - - -
67. ssh2a ENSDARG00000088440 1149 0.991 - - - - - 0.991 - - - slingshot protein phosphatase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-3810]
68. phb2 phb2 3209 0.991 - - - - - 0.991 - - -
69. zgc:77391 zgc:77391 1445 0.991 - - - - - 0.991 - - -
70. sec62 ENSDARG00000019951 3724 0.991 - - - - - 0.991 - - - SEC62 homolog, preprotein translocation factor [Source:ZFIN;Acc:ZDB-GENE-050913-83]
71. fam3a ENSDARG00000070675, ENSDARG00000115910 1377 0.991 - - - - - 0.991 - - - family with sequence similarity 3, member A [Source:ZFIN;Acc:ZDB-GENE-040426-1772]
72. dmrt2a ENSDARG00000015072, ENSDARG00000113160 895 0.991 - - - - - 0.991 - - - doublesex and mab-3 related transcription factor 2a [Source:ZFIN;Acc:ZDB-GENE-990621-7]
73. orc4 ENSDARG00000101161 1081 0.991 - - - - - 0.991 - - - origin recognition complex, subunit 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2224]
74. ins ENSDARG00000035350, ENSDARG00000116735 317 0.991 - - - - - 0.991 - - - preproinsulin [Source:ZFIN;Acc:ZDB-GENE-980526-110]
75. igbp1 ENSDARG00000002184, ENSDARG00000117141 879 0.991 - - - - - 0.991 - - - immunoglobulin (CD79A) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2928]
76. irs2 irs2 392 0.991 - - - - - 0.991 - - -
77. rpa2 ENSDARG00000037188 4284 0.991 - - - - - 0.991 - - - replication protein A2 [Source:ZFIN;Acc:ZDB-GENE-010131-3]
78. C13H9orf72 C13H9orf72 2310 0.991 - - - - - 0.991 - - -
79. CU571255.1 CU571255.1 902 0.991 - - - - - 0.991 - - -
80. FAM117A_1 FAM117A_1 360 0.991 - - - - - 0.991 - - -
81. BX322787.1 ENSDARG00000105779 381 0.99 - - - - - 0.990 - - -
82. nom1 ENSDARG00000060027, ENSDARG00000112720 831 0.99 - - - - - 0.990 - - - nucleolar protein with MIF4G domain 1 [Source:ZFIN;Acc:ZDB-GENE-060503-321]
83. eif2ak1 ENSDARG00000093182, ENSDARG00000112267 695 0.99 - - - - - 0.990 - - - eukaryotic translation initiation factor 2-alpha kinase 1 [Source:ZFIN;Acc:ZDB-GENE-061013-268]
84. CABZ01035189.1 CABZ01035189.1 1070 0.99 - - - - - 0.990 - - -
85. stk38a ENSDARG00000019973 1343 0.99 - - - - - 0.990 - - - serine/threonine kinase 38a [Source:ZFIN;Acc:ZDB-GENE-040426-2811]
86. cradd ENSDARG00000028192 153 0.99 - - - - - 0.990 - - - CASP2 and RIPK1 domain containing adaptor with death domain [Source:ZFIN;Acc:ZDB-GENE-041010-168]
87. dot1l ENSDARG00000061992 602 0.99 - - - - - 0.990 - - - DOT1-like histone H3K79 methyltransferase [Source:ZFIN;Acc:ZDB-GENE-060503-341]
88. dusp8a ENSDARG00000009299 1302 0.99 - - - - - 0.990 - - - dual specificity phosphatase 8a [Source:ZFIN;Acc:ZDB-GENE-040426-1842]
89. pawr ENSDARG00000045486 1580 0.99 - - - - - 0.990 - - - PRKC, apoptosis, WT1, regulator [Source:ZFIN;Acc:ZDB-GENE-041010-108]
90. pnisr ENSDARG00000069855, ENSDARG00000116449 3465 0.99 - - - - - 0.990 - - - PNN-interacting serine/arginine-rich protein [Source:ZFIN;Acc:ZDB-GENE-030131-362]
91. DUSP13_1 DUSP13_1 425 0.99 - - - - - 0.990 - - -
92. chid1 ENSDARG00000069673 675 0.99 - - - - - 0.990 - - - chitinase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9169]
93. sox7 ENSDARG00000030125 806 0.99 - - - - - 0.990 - - - SRY (sex determining region Y)-box 7 [Source:ZFIN;Acc:ZDB-GENE-040109-4]
94. CABZ01041962.1 ENSDARG00000076082 690 0.99 - - - - - 0.990 - - - uncharacterized LOC798124 [Source:NCBI gene;Acc:798124]
95. dus3l ENSDARG00000099528 1192 0.99 - - - - - 0.990 - - - dihydrouridine synthase 3-like (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1260]
96. crfb17 511 0.99 - - - - - 0.990 - - - cytokine receptor family member B17
97. fbxl22 ENSDARG00000096995 1290 0.99 - - - - - 0.990 - - - F-box and leucine-rich repeat protein 22 [Source:ZFIN;Acc:ZDB-GENE-050227-1]
98. si:dkey-221j11.3 ENSDARG00000093304 1001 0.99 - - - - - 0.990 - - - si:dkey-221j11.3 [Source:ZFIN;Acc:ZDB-GENE-090313-247]
99. kcna1 kcna1 174 0.99 - - - - - 0.990 - - -
100. chmp4c ENSDARG00000007418, ENSDARG00000110750 729 0.99 - - - - - 0.990 - - - charged multivesicular body protein 4C [Source:ZFIN;Acc:ZDB-GENE-050417-389]

There are 1237 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA