Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for tspan4

Gene Name Gene ID Reads Annotation
tspan4 tspan4 692










Genes with expression patterns similar to tspan4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tspan4 tspan4 692 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. lmo2 ENSDARG00000095019 1098 2.267 0.742 0.722 - - - - 0.803 - - LIM domain only 2 (rhombotin-like 1) [Source:ZFIN;Acc:ZDB-GENE-980526-419]
3. pxk ENSDARG00000063195 851 1.648 - 0.838 - - - - 0.810 - - PX domain containing serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-050208-393]
4. she ENSDARG00000087956 941 1.615 - 0.831 - - - - 0.784 - - Src homology 2 domain containing E [Source:ZFIN;Acc:ZDB-GENE-090915-6]
5. uncx4.1 ENSDARG00000037760 472 1.607 0.783 - - - - - - 0.824 - Unc4.1 homeobox (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-050714-1]
6. fbxo8 ENSDARG00000007477 603 1.6 - 0.859 - - - - 0.741 - - F-box protein 8 [Source:ZFIN;Acc:ZDB-GENE-060421-7091]
7. vsg1 1870 1.586 - 0.765 - - - - 0.821 - - vessel-specific 1
8. CABZ01018247.1 CABZ01018247.1 609 1.577 - 0.752 - - - - 0.825 - -
9. CABZ01088365.1 CABZ01088365.1 66 1.572 - - 0.713 - - - - 0.859 -
10. si:ch73-61d6.3 ENSDARG00000057826 274 1.571 - - - - - - 0.709 0.862 - si:ch73-61d6.3 [Source:ZFIN;Acc:ZDB-GENE-091204-109]
11. stab1 ENSDARG00000076484 717 1.567 - 0.714 - - - - 0.853 - - stabilin 1 [Source:ZFIN;Acc:ZDB-GENE-050208-554]
12. fundc2 ENSDARG00000103740 3856 1.565 - 0.776 - - - - - 0.789 - fun14 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041010-26]
13. cyp1a ENSDARG00000098315 273 1.532 - 0.745 - - - - 0.787 - - cytochrome P450, family 1, subfamily A [Source:ZFIN;Acc:ZDB-GENE-011219-1]
14. sele ENSDARG00000009123 122 1.524 - 0.742 - - - - 0.782 - - selectin E [Source:ZFIN;Acc:ZDB-GENE-041014-221]
15. il13ra2 ENSDARG00000039436, ENSDARG00000111925 286 1.514 - 0.766 - - - - 0.748 - - interleukin 13 receptor, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030521-10]
16. fam174b ENSDARG00000068709 1171 1.512 0.778 - - - - - 0.734 - - family with sequence similarity 174, member B [Source:ZFIN;Acc:ZDB-GENE-050419-78]
17. igfbp7 ENSDARG00000104138 155 1.504 0.793 - - - - - 0.711 - - insulin-like growth factor binding protein 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2423]
18. ANKS1A ANKS1A 138 1.501 - 0.706 - - - 0.795 - - -
19. zgc:175214 ENSDARG00000022891 1013 1.5 0.716 - - - - - - 0.784 - zgc:175214 [Source:ZFIN;Acc:ZDB-GENE-080303-32]
20. rad17 ENSDARG00000018918 332 1.5 0.711 0.789 - - - - - - - RAD17 checkpoint clamp loader component [Source:ZFIN;Acc:ZDB-GENE-040718-409]
21. atp1a1a.4 ENSDARG00000001870 1864 1.488 - 0.771 - - - - 0.717 - - ATPase Na+/K+ transporting subunit alpha 1a, tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-001212-4]
22. ms4a17a.11 ENSDARG00000094809 1086 1.48 - 0.772 - - - 0.708 - - - membrane-spanning 4-domains, subfamily A, member 17A.11 [Source:ZFIN;Acc:ZDB-GENE-050417-157]
23. fmnl3 ENSDARG00000004372 821 1.465 0.705 - - - - - - 0.760 - formin-like 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1571]
24. nup153 ENSDARG00000099972 1462 1.463 - 0.760 - - - - - 0.703 - nucleoporin 153 [Source:ZFIN;Acc:ZDB-GENE-030131-4581]
25. si:ch73-334d15.2 ENSDARG00000087020 441 1.449 - 0.745 - - - - 0.704 - - si:ch73-334d15.2 [Source:ZFIN;Acc:ZDB-GENE-091204-158]
26. ppap2b ppap2b 2900 1.443 - 0.706 - - - - 0.737 - -
27. agxta ENSDARG00000052099 65 1.441 - 0.737 - - - 0.704 - - - alanine--glyoxylate and serine--pyruvate aminotransferase a [Source:ZFIN;Acc:ZDB-GENE-040718-16]
28. fbxo5 ENSDARG00000039020 1284 1.43 - 0.704 - - - - - 0.726 - F-box protein 5 [Source:ZFIN;Acc:ZDB-GENE-030131-4027]
29. clec14a ENSDARG00000103533 718 1.406 0.703 - - - - - 0.703 - - C-type lectin domain containing 14A [Source:ZFIN;Acc:ZDB-GENE-030131-5536]
30. fam160b2 ENSDARG00000060029, ENSDARG00000115630 221 0.926 - - - - - - - 0.926 - family with sequence similarity 160, member B2 [Source:ZFIN;Acc:ZDB-GENE-061110-76]
31. BX510922.1 ENSDARG00000101184 147 0.92 - - - - - - - 0.920 -
32. kirrelb 383 0.92 - - - - - - - 0.920 - kin of IRRE like b, transcript variant X3
33. si:ch211-281g2.4 si:ch211-281g2.4 121 0.917 - - - - - - - 0.917 -
34. kif19 ENSDARG00000053026 124 0.914 - - - - - - - 0.914 - kinesin family member 19 [Source:ZFIN;Acc:ZDB-GENE-080215-2]
35. METTL9 ENSDARG00000060001 262 0.913 - - - - - - - 0.913 - methyltransferase like 9 [Source:ZFIN;Acc:ZDB-GENE-061013-752]
36. zgc:161969 ENSDARG00000041359 898 0.9 - - - - - - - 0.900 - zgc:161969 [Source:ZFIN;Acc:ZDB-GENE-030131-2597]
37. fads2 ENSDARG00000019532 152 0.882 - - - - - - - 0.882 - fatty acid desaturase 2 [Source:ZFIN;Acc:ZDB-GENE-011212-1]
38. ZNF518B 475 0.874 - - - - - - - 0.874 - zinc finger protein 518B
39. bcs1l ENSDARG00000012295 664 0.874 - - - - - - - 0.874 - BC1 (ubiquinol-cytochrome c reductase) synthesis-like [Source:ZFIN;Acc:ZDB-GENE-040426-938]
40. FGD5 FGD5 250 0.872 - - - - - - - 0.872 -
41. wdr76 ENSDARG00000053554, ENSDARG00000115151 813 0.871 - - - - - - - 0.871 - WD repeat domain 76 [Source:ZFIN;Acc:ZDB-GENE-030131-4513]
42. nudt2 ENSDARG00000058728 371 0.87 - - - - - - - 0.870 - nudix (nucleoside diphosphate linked moiety X)-type motif 2 [Source:ZFIN;Acc:ZDB-GENE-040718-7]
43. eif2b3 ENSDARG00000018106 381 0.869 0.869 - - - - - - - - eukaryotic translation initiation factor 2B, subunit 3 gamma [Source:ZFIN;Acc:ZDB-GENE-040426-1039]
44. pak1ip1 ENSDARG00000044488 1995 0.869 - - - - - - - 0.869 - PAK1 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8414]
45. U2_6 U2_6 1155 0.868 - - - - - - - 0.868 -
46. rad9a ENSDARG00000056984, ENSDARG00000115514 152 0.867 - - - - - - - 0.867 - RAD9 checkpoint clamp component A [Source:ZFIN;Acc:ZDB-GENE-040426-935]
47. tbc1d10a tbc1d10a 462 0.865 - - - - - - - 0.865 -
48. lifrb ENSDARG00000039863 102 0.865 - - - - - 0.865 - - - leukemia inhibitory factor receptor alpha b [Source:ZFIN;Acc:ZDB-GENE-080107-2]
49. C9H2orf69 C9H2orf69 148 0.865 - - - - - - - 0.865 -
50. FP102801.1_1 FP102801.1_1 238 0.864 - - - - - - - 0.864 -
51. CT956064.4 CT956064.4 541 0.864 - - - - - - - 0.864 -
52. HECTD4 ENSDARG00000101079 952 0.863 - - - - - - - 0.863 - HECT domain E3 ubiquitin protein ligase 4 [Source:HGNC Symbol;Acc:HGNC:26611]
53. rxfp2b ENSDARG00000019660 464 0.862 - - - - - - - 0.862 - relaxin family peptide receptor 2b [Source:ZFIN;Acc:ZDB-GENE-110408-27]
54. CABZ01068246.1 ENSDARG00000114719 353 0.862 - - - - - - - 0.862 -
55. F8A3 F8A3 646 0.861 - - - - - - - 0.861 -
56. fancg ENSDARG00000024967, ENSDARG00000113462 82 0.861 - - - - - - - 0.861 - FA complementation group G [Source:ZFIN;Acc:ZDB-GENE-050417-103]
57. CU463857.1 CU463857.1 5541 0.861 0.861 - - - - - - - -
58. si:dkey-97a13.9 si:dkey-97a13.9 169 0.861 - - - - - - - 0.861 -
59. CR848025.1 ENSDARG00000100501 35 0.86 - - - - - - - 0.860 - si:dkey-202l22.4 [Source:NCBI gene;Acc:101882714]
60. mecr ENSDARG00000032326 314 0.86 - - - - - - - 0.860 - mitochondrial trans-2-enoyl-CoA reductase [Source:ZFIN;Acc:ZDB-GENE-050417-399]
61. si:dkey-9i5.1 si:dkey-9i5.1 36 0.86 - - - - - - - 0.860 -
62. zgc:153292 ENSDARG00000070458, ENSDARG00000112223 134 0.86 - - - - - - - 0.860 - zgc:153292 [Source:ZFIN;Acc:ZDB-GENE-060929-1098]
63. CABZ01032488.1 ENSDARG00000099154 262 0.859 - - - - - - - 0.859 - wu:fb14d09 [Source:NCBI gene;Acc:100536795]
64. snx5 ENSDARG00000020442 2463 0.859 - 0.859 - - - - - - - sorting nexin 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2857]
65. si:dkey-10c21.1 ENSDARG00000079133 32 0.859 - - - - - - - 0.859 - si:dkey-10c21.1 [Source:ZFIN;Acc:ZDB-GENE-081104-302]
66. si:ch211-193e13.5 ENSDARG00000052656 61 0.859 - - - - - - - 0.859 - si:ch211-193e13.5 [Source:ZFIN;Acc:ZDB-GENE-081104-158]
67. si:dkey-11f4.20 ENSDARG00000100887 38 0.859 - - - - - - - 0.859 - si:dkey-11f4.20 [Source:ZFIN;Acc:ZDB-GENE-070912-359]
68. si:dkeyp-27e10.6 si:dkeyp-27e10.6 36 0.859 - - - - - - - 0.859 -
69. nitr3a_1 ENSDARG00000110676 44 0.859 - - - - - - - 0.859 - novel immune-type receptor 3a [Source:NCBI gene;Acc:60649]
70. nr3c2 ENSDARG00000102082, ENSDARG00000115513 122 0.859 - - - - - - - 0.859 - nuclear receptor subfamily 3, group C, member 2 [Source:ZFIN;Acc:ZDB-GENE-060531-23]
71. gdap1l1 ENSDARG00000028628 233 0.859 - - - - - - - 0.859 - ganglioside induced differentiation associated protein 1-like 1 [Source:ZFIN;Acc:ZDB-GENE-080812-2]
72. meiob 75 0.859 - - - - - - - 0.859 - meiosis specific with OB domains
73. PIK3R6 PIK3R6 149 0.859 - - - - - - - 0.859 -
74. si:dkey-242e21.3 ENSDARG00000075723 77 0.859 - - - - - - - 0.859 - si:dkey-242e21.3 [Source:ZFIN;Acc:ZDB-GENE-100922-110]
75. si:ch211-233h19.2 ENSDARG00000042213 47 0.858 - - - - - - - 0.858 - si:ch211-233h19.2 [Source:ZFIN;Acc:ZDB-GENE-061009-14]
76. si:ch211-218m3.16 ENSDARG00000044336 33 0.858 - - - - - - - 0.858 - si:ch211-218m3.16 [Source:ZFIN;Acc:ZDB-GENE-091116-19]
77. CR847543.1 ENSDARG00000086708 155 0.858 - - - - - - - 0.858 -
78. GIPR ENSDARG00000025478 87 0.858 - - - - - - - 0.858 - gastric inhibitory polypeptide receptor [Source:ZFIN;Acc:ZDB-GENE-050516-4]
79. MSH4 ENSDARG00000075826 37 0.858 - - - - - - - 0.858 - mutS homolog 4 [Source:ZFIN;Acc:ZDB-GENE-131121-643]
80. pigm ENSDARG00000024277 86 0.858 - - - - - - - 0.858 - phosphatidylinositol glycan anchor biosynthesis, class M [Source:ZFIN;Acc:ZDB-GENE-040426-1393]
81. CABZ01041962.1 ENSDARG00000076082 690 0.858 - - - - - - - 0.858 - uncharacterized LOC798124 [Source:NCBI gene;Acc:798124]
82. si:dkeyp-87d1.1 ENSDARG00000104681 35 0.858 - - - - - - - 0.858 - si:dkeyp-87d1.1 [Source:ZFIN;Acc:ZDB-GENE-041014-75]
83. CR388228.1 ENSDARG00000117809 31 0.858 - - - - - - - 0.858 - uncharacterized LOC110437756 [Source:NCBI gene;Acc:110437756]
84. dnase1 ENSDARG00000012539 65 0.858 - - - - - - - 0.858 - deoxyribonuclease I [Source:ZFIN;Acc:ZDB-GENE-040718-423]
85. si:ch211-173p18.3_1 ENSDARG00000035821 36 0.858 - - - - - - - 0.858 - si:ch211-173p18.3 [Source:ZFIN;Acc:ZDB-GENE-060503-672]
86. pou4f1 ENSDARG00000005559 821 0.857 - - - - - - - 0.857 - POU class 4 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-000523-2]
87. rbm48 ENSDARG00000033754 193 0.857 - 0.857 - - - - - - - RNA binding motif protein 48 [Source:ZFIN;Acc:ZDB-GENE-060328-1]
88. zpcx ENSDARG00000059252, ENSDARG00000111002 33 0.857 - - - - - - - 0.857 - zona pellucida protein C [Source:ZFIN;Acc:ZDB-GENE-040824-1]
89. ccdc41 ccdc41 97 0.857 - - - - - - - 0.857 -
90. C22H19orf44 C22H19orf44 481 0.857 - - - - - - - 0.857 -
91. htr3b ENSDARG00000061749 49 0.857 - - - - - - - 0.857 - 5-hydroxytryptamine (serotonin) receptor 3B [Source:ZFIN;Acc:ZDB-GENE-071012-4]
92. CABZ01067945.1 CABZ01067945.1 469 0.856 - - - - - - - 0.856 -
93. igf2bp2b ENSDARG00000099758, ENSDARG00000111268, ENSDARG00000116761 588 0.856 - 0.856 - - - - - - - insulin-like growth factor 2 mRNA binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-060503-536]
94. tmub2 ENSDARG00000056467, ENSDARG00000109925 100 0.856 - - - - - - - 0.856 - transmembrane and ubiquitin-like domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030616-254]
95. rpp30 ENSDARG00000027428 286 0.856 - - - - - - - 0.856 - ribonuclease P/MRP 30 subunit [Source:ZFIN;Acc:ZDB-GENE-050320-45]
96. jdp2 jdp2 301 0.856 - 0.856 - - - - - - -
97. scpp8 ENSDARG00000093124 54 0.855 - - - - - - - 0.855 - secretory calcium-binding phosphoprotein 8 [Source:ZFIN;Acc:ZDB-GENE-090424-2]
98. prickle1a ENSDARG00000040649 700 0.855 - - - - - - - 0.855 - prickle homolog 1a [Source:ZFIN;Acc:ZDB-GENE-030724-5]
99. POLE4 ENSDARG00000013016 848 0.855 - 0.855 - - - - - - - polymerase (DNA-directed), epsilon 4, accessory subunit [Source:ZFIN;Acc:ZDB-GENE-050522-309]
100. asb16 ENSDARG00000056468, ENSDARG00000110292 126 0.855 - - - - - - - 0.855 - ankyrin repeat and SOCS box containing 16 [Source:ZFIN;Acc:ZDB-GENE-031031-3]

There are 779 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA