Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for tshz1

Gene Name Gene ID Reads Annotation
tshz1 ENSDARG00000005026 1948 teashirt zinc finger homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030820-3]










Genes with expression patterns similar to tshz1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tshz1 ENSDARG00000005026 1948 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 teashirt zinc finger homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030820-3]
2. epha4b ENSDARG00000011600 3110 2.531 - - 0.945 - - 0.841 0.745 - - eph receptor A4b [Source:ZFIN;Acc:ZDB-GENE-030826-6]
3. zeb2a ENSDARG00000062338, ENSDARG00000111349, ENSDARG00000115964 6087 2.473 - - 0.911 - - 0.780 0.782 - - zinc finger E-box binding homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-070912-553]
4. lgi1a ENSDARG00000020493 1218 2.389 - - 0.725 - - 0.912 0.752 - - leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
5. ZFHX3 ENSDARG00000103057 7759 2.377 0.731 - - - - 0.866 0.780 - - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
6. tmpob ENSDARG00000022978 8121 2.346 0.762 - - - - 0.764 0.820 - - thymopoietin b [Source:ZFIN;Acc:ZDB-GENE-050522-8]
7. mcm7 ENSDARG00000101180 12417 2.337 - 0.762 0.757 - - - 0.818 - - minichromosome maintenance complex component 7 [Source:ZFIN;Acc:ZDB-GENE-020419-27]
8. onecutl ENSDARG00000040253 2143 2.317 - - 0.701 - - 0.791 0.825 - - one cut domain, family member, like [Source:ZFIN;Acc:ZDB-GENE-020531-1]
9. npm1b ENSDARG00000037675 5448 2.301 0.768 - - - - 0.804 0.729 - - nucleophosmin 1b [Source:ZFIN;Acc:ZDB-GENE-080723-7]
10. hnrnpub ENSDARG00000004735 16496 2.288 0.706 - - - - 0.780 0.802 - - heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
11. polb ENSDARG00000003749 2049 2.285 - - 0.710 - - 0.700 0.875 - - polymerase (DNA directed), beta [Source:ZFIN;Acc:ZDB-GENE-040830-1]
12. hoxc1a ENSDARG00000070337 1460 2.261 0.751 - - - - 0.804 0.706 - - homeobox C1a [Source:ZFIN;Acc:ZDB-GENE-000822-2]
13. msl2a ENSDARG00000038909 1357 2.261 0.702 - - - - 0.704 0.855 - - male-specific lethal 2 homolog a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-070912-449]
14. TMEM55B_1 TMEM55B_1 495 2.248 0.775 - - - - 0.741 0.732 - -
15. slc35g2b ENSDARG00000045447 378 2.243 0.703 - - - - 0.772 0.768 - - solute carrier family 35, member G2b [Source:ZFIN;Acc:ZDB-GENE-050320-142]
16. s1pr1 ENSDARG00000042690, ENSDARG00000113842, ENSDARG00000116038 2510 2.232 - - 0.715 - - 0.807 0.710 - - sphingosine-1-phosphate receptor 1 [Source:ZFIN;Acc:ZDB-GENE-001228-2]
17. hmgb2b ENSDARG00000053990 11519 2.203 0.717 0.718 - - - - 0.768 - - high mobility group box 2b [Source:ZFIN;Acc:ZDB-GENE-040912-122]
18. CABZ01072954.1 CABZ01072954.1 2330 2.159 0.702 - - - - 0.749 0.708 - -
19. ANKRD11 ENSDARG00000051886 10024 2.143 0.705 - - - - 0.737 0.701 - - ankyrin repeat domain 11 [Source:ZFIN;Acc:ZDB-GENE-030131-3932]
20. foxk2 ENSDARG00000030583 2982 1.794 - - 0.975 - - 0.819 - - - forkhead box K2 [Source:ZFIN;Acc:ZDB-GENE-030131-2861]
21. wasf3 wasf3 3287 1.791 - - 0.969 - - 0.822 - - -
22. si:dkey-7f3.9 ENSDARG00000079008 318 1.774 - - - - - 0.865 0.909 - - si:dkey-7f3.9 [Source:ZFIN;Acc:ZDB-GENE-100922-197]
23. DTX4 ENSDARG00000076302 2642 1.768 - - 0.971 - - - 0.797 - - deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
24. hoxa9b ENSDARG00000056819 3081 1.717 - - - - - 0.902 0.815 - - homeobox A9b [Source:ZFIN;Acc:ZDB-GENE-000823-2]
25. cnot1 ENSDARG00000004174, ENSDARG00000109411 4625 1.716 - 0.741 0.975 - - - - - - CCR4-NOT transcription complex, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040915-1]
26. nova2 ENSDARG00000017673 7685 1.696 - - - - - 0.907 0.789 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
27. ckbb ENSDARG00000043257 3503 1.694 - - - - - 0.902 0.792 - - creatine kinase, brain b [Source:ZFIN;Acc:ZDB-GENE-020103-2]
28. cul4b ENSDARG00000060510 6053 1.693 - - 0.959 - - - 0.734 - - cullin 4B [Source:ZFIN;Acc:ZDB-GENE-041008-208]
29. TUBA1A ENSDARG00000001889 25294 1.682 - - - - - 0.911 0.771 - - tubulin, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090507-4]
30. CABZ01115322.1 CABZ01115322.1 1283 1.682 - - - - - 0.804 0.878 - -
31. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 1.681 - - - - - 0.875 0.806 - - dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
32. hoxb8b ENSDARG00000054025, ENSDARG00000111056 2106 1.676 - - - - - 0.871 0.805 - - homeobox B8b [Source:ZFIN;Acc:ZDB-GENE-980526-291]
33. midn ENSDARG00000018524 7559 1.674 - - 0.904 - - - 0.770 - - midnolin [Source:ZFIN;Acc:ZDB-GENE-030131-2433]
34. tmem59l ENSDARG00000003655 1536 1.663 - - - - - 0.763 0.900 - - transmembrane protein 59-like [Source:ZFIN;Acc:ZDB-GENE-040426-2651]
35. itm2ca ENSDARG00000043448 1265 1.663 - - - - - 0.904 0.759 - - integral membrane protein 2Ca [Source:ZFIN;Acc:ZDB-GENE-040718-284]
36. dnajc5aa ENSDARG00000042948 2885 1.663 - - - - - 0.840 0.823 - - DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
37. STMN3 ENSDARG00000038465 1009 1.66 - - - - - 0.922 0.738 - - stathmin-like 3 [Source:ZFIN;Acc:ZDB-GENE-081124-2]
38. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 1.659 - - - - - 0.895 0.764 - - C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
39. tuba8l3 ENSDARG00000070155 7525 1.657 - - 0.911 - - 0.746 - - - tubulin, alpha 8 like 3 [Source:ZFIN;Acc:ZDB-GENE-040801-77]
40. aldocb ENSDARG00000019702 2111 1.656 - - - - - 0.880 0.776 - - aldolase C, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-030821-1]
41. dpysl3 ENSDARG00000002587 4381 1.655 - - - - - 0.872 0.783 - - dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
42. slc18a3a ENSDARG00000006356 1285 1.654 - - - - - 0.886 0.768 - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
43. mbd3b ENSDARG00000042029, ENSDARG00000061810 4561 1.653 - - - - - 0.836 0.817 - - methyl-CpG binding domain protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9792]
44. nes ENSDARG00000088805 2710 1.653 - - - - - 0.890 0.763 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
45. sept5a ENSDARG00000013843 1206 1.652 - - - - - 0.943 0.709 - - septin 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7868]
46. C7H4orf48 C7H4orf48 1455 1.648 - - - - - 0.849 0.799 - -
47. myt1b ENSDARG00000102879 5411 1.648 - - - - - 0.907 0.741 - - myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
48. FP016176.1 FP016176.1 7030 1.648 - - - - - 0.837 0.811 - -
49. fam219ab ENSDARG00000013813 591 1.645 - - - - - 0.840 0.805 - - family with sequence similarity 219, member Ab [Source:ZFIN;Acc:ZDB-GENE-050522-213]
50. PACS1_1 PACS1_1 1264 1.642 - - - - - 0.861 0.781 - -
51. irx1b ENSDARG00000056594 2224 1.642 - - - - - 0.901 0.741 - - iroquois homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-010716-1]
52. pcdh1gc5 ENSDARG00000104826 10052 1.641 - - - - - 0.856 0.785 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
53. napg napg 645 1.641 - - - - - 0.909 0.732 - -
54. gfap ENSDARG00000025301 5584 1.64 - - - - - 0.892 0.748 - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
55. tuba1c ENSDARG00000055216 8384 1.639 - - - - - 0.877 0.762 - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
56. stx1b ENSDARG00000000503 2724 1.638 - - - - - 0.904 0.734 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
57. AKT3 AKT3 1729 1.638 - - - - - 0.872 0.766 - -
58. msi1 ENSDARG00000010710 2634 1.638 - - - - - 0.901 0.737 - - musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
59. grin1a ENSDARG00000027828 1327 1.637 - - - - - 0.881 0.756 - - glutamate receptor, ionotropic, N-methyl D-aspartate 1a [Source:ZFIN;Acc:ZDB-GENE-051202-1]
60. ptprna ENSDARG00000058646 1327 1.637 - - - - - 0.899 0.738 - - protein tyrosine phosphatase, receptor type, Na [Source:ZFIN;Acc:ZDB-GENE-030131-3511]
61. hmgb1b ENSDARG00000030479 10398 1.636 - - - - - 0.854 0.782 - - high mobility group box 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8480]
62. sox19a ENSDARG00000010770, ENSDARG00000110497 4683 1.635 - - - - - 0.889 0.746 - - SRY (sex determining region Y)-box 19a [Source:ZFIN;Acc:ZDB-GENE-980526-102]
63. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 1.633 - - - - - 0.903 0.730 - - one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
64. rab3ab ENSDARG00000043835 1267 1.63 - - - - - 0.884 0.746 - - RAB3A, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-041210-268]
65. rab6ba ENSDARG00000034522 495 1.628 - - - - - 0.846 0.782 - - RAB6B, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-050809-136]
66. slc1a3a ENSDARG00000104431 9888 1.626 - - - - - 0.849 0.777 - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
67. atp6v0cb ENSDARG00000036577 3472 1.622 - - - - - 0.837 0.785 - - ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
68. CYTH2 ENSDARG00000028800 2349 1.621 - - - - - 0.775 0.846 - - cytohesin 2 [Source:HGNC Symbol;Acc:HGNC:9502]
69. nrarpb ENSDARG00000018958 6225 1.621 - - - - - 0.852 0.769 - - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
70. cntnap2b ENSDARG00000074558, ENSDARG00000109616, ENSDARG00000116850 559 1.619 - - - - - 0.874 0.745 - - contactin associated protein like 2b [Source:NCBI gene;Acc:563345]
71. hmgb3a ENSDARG00000056725 15668 1.618 - - - - - 0.873 0.745 - - high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
72. pacsin1b ENSDARG00000042128 1051 1.615 - - - - - 0.896 0.719 - - protein kinase C and casein kinase substrate in neurons 1b [Source:ZFIN;Acc:ZDB-GENE-050913-35]
73. metrn ENSDARG00000030367, ENSDARG00000112407, ENSDARG00000115842 7032 1.614 - - - - - 0.887 0.727 - - meteorin, glial cell differentiation regulator [Source:ZFIN;Acc:ZDB-GENE-050102-1]
74. sall3b ENSDARG00000057586 982 1.614 - - - - - 0.867 0.747 - - spalt-like transcription factor 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9140]
75. vsnl1b ENSDARG00000044053 1120 1.613 - - - - - 0.883 0.730 - - visinin-like 1b [Source:ZFIN;Acc:ZDB-GENE-080225-39]
76. TNRC6C_2 TNRC6C_2 2444 1.613 - - - - - 0.899 0.714 - -
77. st8sia2 ENSDARG00000018788 2183 1.612 - - - - - 0.807 0.805 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-020919-4]
78. scocb ENSDARG00000002217 1844 1.612 - - - - - 0.743 0.869 - - short coiled-coil protein b [Source:ZFIN;Acc:ZDB-GENE-041010-41]
79. sall1a ENSDARG00000074319, ENSDARG00000111696 1486 1.612 - - - - - 0.788 0.824 - - spalt-like transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-020228-2]
80. TUBB8P7_1 TUBB8P7_1 2722 1.611 - - - - - 0.852 0.759 - -
81. syt11a ENSDARG00000057913 1145 1.61 - - - - - 0.809 0.801 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
82. SPOCK1 ENSDARG00000074644 794 1.609 - - - - - 0.824 0.785 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
83. sypa ENSDARG00000042974, ENSDARG00000110528 3217 1.604 - - - - - 0.867 0.737 - - synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]
84. slc1a2b ENSDARG00000102453 3136 1.604 - - - - - 0.838 0.766 - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
85. kcnc3a ENSDARG00000055855 1821 1.604 - - - - - 0.856 0.748 - - potassium voltage-gated channel, Shaw-related subfamily, member 3a [Source:ZFIN;Acc:ZDB-GENE-100901-1]
86. vezf1a ENSDARG00000008247 1449 1.603 - - - - - 0.849 0.754 - - vascular endothelial zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-040108-4]
87. eno2 ENSDARG00000014287 2162 1.603 - - - - - 0.850 0.753 - - enolase 2 [Source:ZFIN;Acc:ZDB-GENE-040704-27]
88. st18 663 1.602 - - - - - 0.838 0.764 - - suppression of tumorigenicity 18, zinc finger
89. ptprsb 1085 1.602 - - - - - 0.782 0.820 - - protein tyrosine phosphatase, receptor type, s, b
90. her15.1 ENSDARG00000054560, ENSDARG00000054562 1500 1.601 - - - - - 0.846 0.755 - - hairy and enhancer of split-related 15, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030707-2]
91. SEMA7A ENSDARG00000078707 465 1.599 - - - - - 0.883 0.716 - - semaphorin 7A [Source:ZFIN;Acc:ZDB-GENE-030131-3633]
92. rimkla ENSDARG00000016830, ENSDARG00000112193 4111 1.598 - - - - - 0.848 0.750 - - ribosomal modification protein rimK-like family member A [Source:ZFIN;Acc:ZDB-GENE-040912-20]
93. si:dkey-28b4.8 ENSDARG00000002840 1277 1.598 - - - - - 0.855 0.743 - - si:dkey-28b4.8 [Source:ZFIN;Acc:ZDB-GENE-090501-2]
94. adam23a ENSDARG00000062323 580 1.595 - - - - - 0.811 0.784 - - ADAM metallopeptidase domain 23a [Source:ZFIN;Acc:ZDB-GENE-070810-2]
95. nadl1.1 1200 1.593 - - - - - 0.833 0.760 - - neural adhesion molecule L1.1, transcript variant X1
96. CR548630.1 CR548630.1 3301 1.593 - - 0.705 - - 0.888 - - -
97. cdk5r1b ENSDARG00000045087 2075 1.591 - - - - - 0.890 0.701 - - cyclin-dependent kinase 5, regulatory subunit 1b (p35) [Source:ZFIN;Acc:ZDB-GENE-040718-220]
98. arnt2 ENSDARG00000103697 5731 1.59 - - - - - 0.806 0.784 - - aryl-hydrocarbon receptor nuclear translocator 2 [Source:ZFIN;Acc:ZDB-GENE-001207-3]
99. apc ENSDARG00000058868 2605 1.589 - - - - - 0.771 0.818 - - adenomatous polyposis coli [Source:ZFIN;Acc:ZDB-GENE-031112-7]
100. mnx2a ENSDARG00000042106 939 1.588 - - - - - 0.814 0.774 - - motor neuron and pancreas homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-040415-1]

There are 1328 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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