Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for tsfm

Gene Name Gene ID Reads Annotation
tsfm ENSDARG00000060748, ENSDARG00000110047 1003 Ts translation elongation factor, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-061215-17]










Genes with expression patterns similar to tsfm

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tsfm ENSDARG00000060748, ENSDARG00000110047 1003 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Ts translation elongation factor, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-061215-17]
2. zgc:92113 1738 1.539 - 0.833 - - - 0.706 - - - zgc:92113
3. mrps25 ENSDARG00000041306 3654 1.519 - - - 0.778 - - 0.741 - - mitochondrial ribosomal protein S25 [Source:ZFIN;Acc:ZDB-GENE-050417-52]
4. clec14a ENSDARG00000103533 718 1.517 - 0.746 - - - - 0.771 - - C-type lectin domain containing 14A [Source:ZFIN;Acc:ZDB-GENE-030131-5536]
5. mrpl28 ENSDARG00000057805, ENSDARG00000109307, ENSDARG00000115867 1325 1.516 - 0.803 - - - - 0.713 - - mitochondrial ribosomal protein L28 [Source:ZFIN;Acc:ZDB-GENE-050522-113]
6. trim45 ENSDARG00000076781 578 1.516 - 0.752 - - - - 0.764 - - tripartite motif containing 45 [Source:ZFIN;Acc:ZDB-GENE-070912-389]
7. smim12 ENSDARG00000070358 895 1.511 - - - 0.781 - 0.730 - - - small integral membrane protein 12 [Source:ZFIN;Acc:ZDB-GENE-050320-101]
8. ahcyl2 ENSDARG00000039343 1210 1.51 - 0.764 - - - - 0.746 - - adenosylhomocysteinase-like 2 [Source:ZFIN;Acc:ZDB-GENE-040115-5]
9. CABZ01006828.1 CABZ01006828.1 410 1.498 - 0.731 - - - - 0.767 - -
10. fam174b ENSDARG00000068709 1171 1.497 - 0.757 - - - - 0.740 - - family with sequence similarity 174, member B [Source:ZFIN;Acc:ZDB-GENE-050419-78]
11. psmd4a ENSDARG00000101295 1410 1.484 - 0.712 - - - 0.772 - - - proteasome 26S subunit, non-ATPase 4a [Source:ZFIN;Acc:ZDB-GENE-040625-104]
12. rpf2 ENSDARG00000043960 2719 1.462 - 0.720 - - - - 0.742 - - ribosome production factor 2 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2501]
13. col4a2 ENSDARG00000104110 947 1.445 0.718 - - - - 0.727 - - - collagen, type IV, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-070725-3]
14. rprd1b ENSDARG00000038113 1105 1.442 - 0.733 - - - 0.709 - - - regulation of nuclear pre-mRNA domain containing 1B [Source:ZFIN;Acc:ZDB-GENE-030131-355]
15. pane1 ENSDARG00000024681 866 1.435 0.716 0.719 - - - - - - - proliferation associated nuclear element [Source:ZFIN;Acc:ZDB-GENE-040611-4]
16. pmpca ENSDARG00000102607 1024 0.899 - 0.899 - - - - - - - peptidase (mitochondrial processing) alpha [Source:ZFIN;Acc:ZDB-GENE-030131-5809]
17. PARL 2511 0.882 - 0.882 - - - - - - - presenilin associated rhomboid like
18. EML4_1 EML4_1 8736 0.881 - 0.881 - - - - - - -
19. PCDH12 ENSDARG00000076594 381 0.879 - 0.879 - - - - - - - protocadherin 12 [Source:ZFIN;Acc:ZDB-GENE-140106-126]
20. HID1 HID1 282 0.877 - 0.877 - - - - - - -
21. exosc10 ENSDARG00000037708, ENSDARG00000115953 1121 0.866 - - - - - - 0.866 - - exosome component 10 [Source:ZFIN;Acc:ZDB-GENE-040426-781]
22. hells ENSDARG00000057738, ENSDARG00000112932, ENSDARG00000116012 1443 0.865 - 0.865 - - - - - - - helicase, lymphoid specific [Source:ZFIN;Acc:ZDB-GENE-030131-9923]
23. suz12b ENSDARG00000098924, ENSDARG00000114239, ENSDARG00000114524 1947 0.862 - 0.862 - - - - - - - SUZ12, polycomb repressive complex 2 subunit b [Source:ZFIN;Acc:ZDB-GENE-030131-3255]
24. kpna1 ENSDARG00000016360 1275 0.861 - 0.861 - - - - - - - karyopherin alpha 1 (importin alpha 5) [Source:ZFIN;Acc:ZDB-GENE-091116-39]
25. diablob ENSDARG00000014956 745 0.86 - 0.860 - - - - - - - diablo, IAP-binding mitochondrial protein b [Source:ZFIN;Acc:ZDB-GENE-070112-202]
26. bxdc2 ENSDARG00000098935 1348 0.86 - 0.860 - - - - - - - brix domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060518-1]
27. polr2gl ENSDARG00000056127 1771 0.854 - 0.854 - - - - - - - polymerase (RNA) II (DNA directed) polypeptide G-like [Source:ZFIN;Acc:ZDB-GENE-030131-2808]
28. rbm42 ENSDARG00000039910 1111 0.853 - 0.853 - - - - - - - RNA binding motif protein 42 [Source:ZFIN;Acc:ZDB-GENE-040809-2]
29. RNF5 ENSDARG00000075606 1730 0.852 - 0.852 - - - - - - - ring finger protein 5 [Source:HGNC Symbol;Acc:HGNC:10068]
30. prdx6 ENSDARG00000043511, ENSDARG00000116085 3456 0.852 - 0.852 - - - - - - - peroxiredoxin 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1778]
31. zgc:66433 ENSDARG00000071697 688 0.845 - 0.845 - - - - - - - zgc:66433 [Source:ZFIN;Acc:ZDB-GENE-030131-9832]
32. GANAB_1 GANAB_1 685 0.842 - 0.842 - - - - - - -
33. arhgap5 ENSDARG00000061294 2228 0.842 - 0.842 - - - - - - - Rho GTPase activating protein 5 [Source:ZFIN;Acc:ZDB-GENE-081014-1]
34. CABZ01115322.1 CABZ01115322.1 1283 0.842 - 0.842 - - - - - - -
35. fam222a ENSDARG00000090797 566 0.84 - 0.840 - - - - - - - family with sequence similarity 222, member A [Source:ZFIN;Acc:ZDB-GENE-050309-42]
36. ipo9 ENSDARG00000016753, ENSDARG00000113327 936 0.839 - 0.839 - - - - - - - importin 9 [Source:ZFIN;Acc:ZDB-GENE-040426-2953]
37. uso1 ENSDARG00000019581 479 0.837 - - - - - - 0.837 - - USO1 vesicle transport factor [Source:ZFIN;Acc:ZDB-GENE-040426-688]
38. SCN1B SCN1B 191 0.833 - - - - - 0.833 - - -
39. garem ENSDARG00000017242 912 0.833 - 0.833 - - - - - - - GRB2 associated, regulator of MAPK1 [Source:ZFIN;Acc:ZDB-GENE-040426-767]
40. pou3f3a ENSDARG00000042032 2835 0.833 - 0.833 - - - - - - - POU class 3 homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-980526-220]
41. cstf2_1 ENSDARG00000090788 709 0.833 - 0.833 - - - - - - - cleavage stimulation factor, 3' pre-RNA, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-031118-2]
42. PXMP4 ENSDARG00000114885 212 0.832 - - - - - - 0.832 - - peroxisomal membrane protein 4 [Source:HGNC Symbol;Acc:HGNC:15920]
43. phf17 phf17 790 0.83 - 0.830 - - - - - - -
44. pdhx ENSDARG00000051756 924 0.829 - - - - - 0.829 - - - pyruvate dehydrogenase complex, component X [Source:ZFIN;Acc:ZDB-GENE-040426-1539]
45. klfd klfd 625 0.829 - 0.829 - - - - - - -
46. TACC2 1702 0.829 - 0.829 - - - - - - - transforming, acidic coiled-coil containing protein 2, transcript variant X17
47. zbed4 ENSDARG00000024306, ENSDARG00000110788 513 0.829 - 0.829 - - - - - - - zinc finger, BED-type containing 4 [Source:ZFIN;Acc:ZDB-GENE-041210-305]
48. prickle3 ENSDARG00000073996 840 0.826 - - - - - - 0.826 - - prickle homolog 3 [Source:ZFIN;Acc:ZDB-GENE-081105-86]
49. slc22a2 ENSDARG00000030530 313 0.825 - - - - - - 0.825 - - solute carrier family 22 (organic cation transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2167]
50. hdhd3 ENSDARG00000053934 190 0.824 - 0.824 - - - - - - - haloacid dehalogenase-like hydrolase domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040724-118]
51. AL954696.1 ENSDARG00000078442 768 0.823 0.823 - - - - - - - - NOP9 nucleolar protein [Source:NCBI gene;Acc:100332577]
52. isoc2 ENSDARG00000013371 1378 0.822 - 0.822 - - - - - - - isochorismatase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070518-1]
53. snai1b ENSDARG00000046019 886 0.822 - 0.822 - - - - - - - snail family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-980526-514]
54. mpp6a ENSDARG00000056892 324 0.821 - 0.821 - - - - - - - membrane protein, palmitoylated 6a (MAGUK p55 subfamily member 6) [Source:ZFIN;Acc:ZDB-GENE-050506-35]
55. zgc:86811 ENSDARG00000035573 958 0.821 - - - - - - 0.821 - - zgc:86811 [Source:ZFIN;Acc:ZDB-GENE-040625-113]
56. CR627484.1 CR627484.1 452 0.821 - - - - - - 0.821 - -
57. FGD5 FGD5 250 0.82 - 0.820 - - - - - - -
58. mau2 ENSDARG00000042056 2378 0.818 - 0.818 - - - - - - - MAU2 sister chromatid cohesion factor [Source:ZFIN;Acc:ZDB-GENE-050522-383]
59. mapkapk5 ENSDARG00000028082 443 0.818 - 0.818 - - - - - - - mitogen-activated protein kinase-activated protein kinase 5 [Source:ZFIN;Acc:ZDB-GENE-040718-25]
60. usp40 ENSDARG00000071197 825 0.817 - 0.817 - - - - - - - ubiquitin specific peptidase 40 [Source:ZFIN;Acc:ZDB-GENE-060518-5]
61. myca ENSDARG00000045695 582 0.817 - - - - - - 0.817 - - MYC proto-oncogene, bHLH transcription factor a [Source:ZFIN;Acc:ZDB-GENE-990415-162]
62. slc25a5 ENSDARG00000092553 626 0.817 - - - - - 0.817 - - - solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5 [Source:ZFIN;Acc:ZDB-GENE-020419-9]
63. taf1 ENSDARG00000035330 912 0.817 - 0.817 - - - - - - - TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-5576]
64. eif4e2rs1 ENSDARG00000015835 589 0.817 - 0.817 - - - - - - - eukaryotic translation initiation factor 4E family member 2 related sequence 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1728]
65. casp3a ENSDARG00000017905, ENSDARG00000113754 2819 0.816 - 0.816 - - - - - - - caspase 3, apoptosis-related cysteine peptidase a [Source:ZFIN;Acc:ZDB-GENE-011210-1]
66. actr1 ENSDARG00000011611 3879 0.816 - 0.816 - - - - - - - ARP1 actin related protein 1, centractin [Source:ZFIN;Acc:ZDB-GENE-040426-2695]
67. LRCH3 ENSDARG00000100679 147 0.816 - 0.816 - - - - - - - leucine-rich repeats and calponin homology (CH) domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-071004-44]
68. cmip ENSDARG00000062933 4521 0.815 - 0.815 - - - - - - - c-Maf inducing protein [Source:ZFIN;Acc:ZDB-GENE-050419-50]
69. phc2a ENSDARG00000056695, ENSDARG00000110253 1726 0.815 - 0.815 - - - - - - - polyhomeotic homolog 2a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-020312-1]
70. zgc:136908 ENSDARG00000011983 97 0.815 - - - - - - 0.815 - - zgc:136908 [Source:ZFIN;Acc:ZDB-GENE-060312-22]
71. pnisr ENSDARG00000069855, ENSDARG00000116449 3465 0.814 - 0.814 - - - - - - - PNN-interacting serine/arginine-rich protein [Source:ZFIN;Acc:ZDB-GENE-030131-362]
72. lphn3.1 lphn3.1 756 0.813 - 0.813 - - - - - - -
73. prmt1 ENSDARG00000010246 11311 0.812 - 0.812 - - - - - - - protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
74. ccar1 ENSDARG00000074759, ENSDARG00000114899 1329 0.812 - 0.812 - - - - - - - cell division cycle and apoptosis regulator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-146]
75. kctd10 ENSDARG00000017115 1659 0.811 - 0.811 - - - - - - - potassium channel tetramerization domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-040426-2843]
76. nmt1b ENSDARG00000057206 654 0.811 - 0.811 - - - - - - - N-myristoyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-081222-3]
77. fbxo9 ENSDARG00000011055 1388 0.811 - 0.811 - - - - - - - F-box protein 9 [Source:ZFIN;Acc:ZDB-GENE-030131-4194]
78. tex10 ENSDARG00000055885 1229 0.81 - 0.810 - - - - - - - testis expressed 10 [Source:ZFIN;Acc:ZDB-GENE-040426-2827]
79. TAF4 TAF4 658 0.809 - 0.809 - - - - - - -
80. rrs1 ENSDARG00000003941 1257 0.809 - 0.809 - - - - - - - RRS1 ribosome biogenesis regulator homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-9345]
81. zmiz1a ENSDARG00000074502 3920 0.808 - 0.808 - - - - - - - zinc finger, MIZ-type containing 1a [Source:ZFIN;Acc:ZDB-GENE-080220-27]
82. dcn ENSDARG00000012066 6182 0.808 - 0.808 - - - - - - - decorin [Source:ZFIN;Acc:ZDB-GENE-010102-1]
83. WIZ WIZ 1188 0.808 - 0.808 - - - - - - -
84. zgc:65997 ENSDARG00000043562, ENSDARG00000114791, ENSDARG00000115351 606 0.807 - 0.807 - - - - - - - zgc:65997 [Source:ZFIN;Acc:ZDB-GENE-040426-1502]
85. LRRC8A LRRC8A 406 0.807 - 0.807 - - - - - - -
86. gadd45gip1 ENSDARG00000039338 1878 0.807 - 0.807 - - - - - - - growth arrest and DNA-damage-inducible, gamma interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-091204-282]
87. gak ENSDARG00000090654 695 0.805 - - - - - - 0.805 - - cyclin G associated kinase [Source:ZFIN;Acc:ZDB-GENE-041210-358]
88. Mar-07 Mar-07 2926 0.804 - 0.804 - - - - - - -
89. ireb2 ENSDARG00000021466 699 0.803 - 0.803 - - - - - - - iron-responsive element binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-051205-1]
90. si:dkey-118j18.2 ENSDARG00000096457 5293 0.803 - 0.803 - - - - - - - si:dkey-118j18.2 [Source:ZFIN;Acc:ZDB-GENE-030131-8692]
91. PAPD5 2090 0.803 - 0.803 - - - - - - - PAP associated domain containing 5, transcript variant X1
92. galk2 ENSDARG00000004059 122 0.803 - - - - - - 0.803 - - galactokinase 2 [Source:ZFIN;Acc:ZDB-GENE-041114-143]
93. bysl ENSDARG00000001057 2621 0.802 - - - - - - 0.802 - - bystin-like [Source:ZFIN;Acc:ZDB-GENE-040426-1287]
94. prkri prkri 693 0.799 0.799 - - - - - - - -
95. josd2 ENSDARG00000057626, ENSDARG00000111978 273 0.799 - 0.799 - - - - - - - Josephin domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-850]
96. six2b ENSDARG00000054878 567 0.796 - - - - - 0.796 - - - SIX homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-080723-23]
97. slc39a10 ENSDARG00000005823 2634 0.796 - 0.796 - - - - - - - solute carrier family 39 (zinc transporter), member 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1157]
98. brd2a ENSDARG00000022280 3481 0.796 - 0.796 - - - - - - - bromodomain containing 2a [Source:ZFIN;Acc:ZDB-GENE-990415-248]
99. oser1 ENSDARG00000024669 676 0.796 - 0.796 - - - - - - - oxidative stress responsive serine-rich 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1325]
100. atf3 ENSDARG00000007823 829 0.795 - 0.795 - - - - - - - activating transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-040426-728]

There are 455 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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