Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for tsen54

Gene Name Gene ID Reads Annotation
tsen54 ENSDARG00000036844 11 TSEN54 tRNA splicing endonuclease subunit [Source:ZFIN;Acc:ZDB-GENE-050522-454]










Genes with expression patterns similar to tsen54

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tsen54 ENSDARG00000036844 11 6 - 1.000 1.000 1.000 1.000 - - 1.000 1.000 TSEN54 tRNA splicing endonuclease subunit [Source:ZFIN;Acc:ZDB-GENE-050522-454]
2. CU207301.2 ENSDARG00000097677 2 1.987 - 1.000 0.987 - - - - - -
3. zgc:198241 ENSDARG00000076483, ENSDARG00000116081 3 1.977 - 1.000 0.977 - - - - - - zgc:198241 [Source:ZFIN;Acc:ZDB-GENE-080303-14]
4. si:ch211-220f16.1 ENSDARG00000093977 4 1.954 - - - - 0.954 - - 1.000 - si:ch211-220f16.1 [Source:ZFIN;Acc:ZDB-GENE-070912-198]
5. BX000701.3 BX000701.3 4 1.954 - 1.000 - - 0.954 - - - -
6. NLRC5 ENSDARG00000024631 11 1.915 - 1.000 - - 0.915 - - - - NLR family, CARD domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-080429-2]
7. FP085391.2 FP085391.2 85 1.908 - 1.000 - - 0.908 - - - -
8. si:ch211-199g17.8 si:ch211-199g17.8 9 1.902 - 1.000 - - 0.902 - - - -
9. prg4a ENSDARG00000010482 10 1.864 - - - - 0.864 - - 1.000 - proteoglycan 4a [Source:ZFIN;Acc:ZDB-GENE-030131-8295]
10. si:dkeyp-69c1.9 ENSDARG00000091888 39 1.86 - 0.915 - - - - - - 0.945 si:dkeyp-69c1.9 [Source:ZFIN;Acc:ZDB-GENE-030131-1774]
11. TNIP2 ENSDARG00000074501 35 1.84 - 0.917 0.923 - - - - - - TNFAIP3 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-120913-2]
12. DLK1 60 1.771 - 1.000 0.771 - - - - - - delta like non-canonical Notch ligand 1
13. st8sia1 ENSDARG00000098221 34 1.767 - 1.000 - - 0.767 - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-051005-1]
14. si:rp71-45g20.6 si:rp71-45g20.6 19 1.719 - 1.000 - - - - - - 0.719
15. ankrd45 ENSDARG00000011326 62 1.709 - 1.000 - - - - - - 0.709 ankyrin repeat domain 45 [Source:ZFIN;Acc:ZDB-GENE-050522-311]
16. BX511034.2 ENSDARG00000071636 31 1.705 - 1.000 - - - - - - 0.705 novel protein similar to vertebrate amiloride-sensitive cation channel 2 neuronal (ACCN2) [Source:NCBI gene;Acc:100151078]
17. casp3b ENSDARG00000055045 54 1.683 - - 0.929 - - - - - 0.754 caspase 3, apoptosis-related cysteine peptidase b [Source:ZFIN;Acc:ZDB-GENE-070607-1]
18. pik3cd ENSDARG00000003250 53 1.619 - 0.741 - - - - - - 0.878 phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit delta [Source:ZFIN;Acc:ZDB-GENE-040426-1128]
19. si:dkeyp-51b9.3 ENSDARG00000092379 1374 1.609 - 0.721 0.888 - - - - - - si:dkeyp-51b9.3 [Source:ZFIN;Acc:ZDB-GENE-081104-469]
20. rictora ENSDARG00000100867 20 1.582 - - - - - - - 0.799 0.783 RPTOR independent companion of MTOR, complex 2 a [Source:ZFIN;Acc:ZDB-GENE-060526-49]
21. CU633740.2 CU633740.2 16 1.534 - - - - - - - 0.824 0.710
22. si:dkeyp-13d11.2 79 1.484 - 0.727 - - - - - - 0.757 si:dkeyp-13d11.2
23. si:ch211-147h1.4 ENSDARG00000045157 8 1.474 - 0.712 0.762 - - - - - - si:ch211-147h1.4 [Source:ZFIN;Acc:ZDB-GENE-040724-228]
24. si:ch211-286e11.3 si:ch211-286e11.3 20 1.471 - 0.747 - - - - - 0.724 -
25. zgc:162184 ENSDARG00000077217 47 1.43 - 0.729 - - - - - 0.701 - zgc:162184 [Source:ZFIN;Acc:ZDB-GENE-070424-83]
26. chia.3 ENSDARG00000009612 14 1 - 1.000 - - - - - - - chitinase, acidic.3 [Source:ZFIN;Acc:ZDB-GENE-040426-2891]
27. rmnd1 ENSDARG00000027465 116 1 - 1.000 - - - - - - - required for meiotic nuclear division 1 homolog [Source:ZFIN;Acc:ZDB-GENE-050522-21]
28. si:ch211-281p14.2 22 1 - 1.000 - - - - - - - si:ch211-281p14.2, transcript variant X2
29. C8H1orf173 C8H1orf173 10 1 - 1.000 - - - - - - -
30. CABZ01054394.1 ENSDARG00000090942 12 1 - 1.000 - - - - - - - gastrula zinc finger protein XlCGF26.1-like [Source:NCBI gene;Acc:101885996]
31. lgals3bpa ENSDARG00000037805 2 1 - 1.000 - - - - - - - lectin, galactoside-binding, soluble, 3 binding protein a [Source:ZFIN;Acc:ZDB-GENE-060331-57]
32. glra4b ENSDARG00000058103 0 1 - 1.000 - - - - - - - glycine receptor, alpha 4b [Source:ZFIN;Acc:ZDB-GENE-020402-2]
33. si:ch73-59c19.1 ENSDARG00000091909 64 1 - 1.000 - - - - - - - si:ch73-59c19.1 [Source:ZFIN;Acc:ZDB-GENE-100922-247]
34. si:ch211-262h13.4 si:ch211-262h13.4 3 1 - 1.000 - - - - - - -
35. si:ch1073-464p5.5 ENSDARG00000079544 5 1 - 1.000 - - - - - - - si:ch1073-464p5.5 [Source:ZFIN;Acc:ZDB-GENE-091116-35]
36. vax2 ENSDARG00000058702 175 1 - 1.000 - - - - - - - ventral anterior homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-030904-8]
37. slc43a3a ENSDARG00000059682 27 1 - 1.000 - - - - - - - solute carrier family 43, member 3a [Source:ZFIN;Acc:ZDB-GENE-110208-8]
38. si:ch211-268b13.3 si:ch211-268b13.3 28 1 - 1.000 - - - - - - -
39. si:dkey-11f14.2 si:dkey-11f14.2 2 1 - 1.000 - - - - - - -
40. fam213ab 1 1 - 1.000 - - - - - - - family with sequence similarity 213, member Ab
41. prkcba ENSDARG00000008723, ENSDARG00000116813 30 1 - 1.000 - - - - - - - protein kinase C, beta a [Source:ZFIN;Acc:ZDB-GENE-040426-1354]
42. si:ch211-218h8.1 ENSDARG00000091026 0 1 - 1.000 - - - - - - - si:ch211-218h8.1 [Source:ZFIN;Acc:ZDB-GENE-081103-16]
43. mir21-2 18 1 - 1.000 - - - - - - - microRNA 21-2
44. CABZ01117437.1 CABZ01117437.1 11 1 - 1.000 - - - - - - -
45. matn3a ENSDARG00000069245 2410 1 - 1.000 - - - - - - - matrilin 3a [Source:ZFIN;Acc:ZDB-GENE-040822-21]
46. PEG3_19 PEG3_19 29 1 - 1.000 - - - - - - -
47. si:ch73-289h5.1 si:ch73-289h5.1 2 1 - 1.000 - - - - - - -
48. adam10b ENSDARG00000015502 26 1 - - - - - - - 1.000 - ADAM metallopeptidase domain 10b [Source:ZFIN;Acc:ZDB-GENE-071115-1]
49. BX548047.2 ENSDARG00000115500 17 1 - 1.000 - - - - - - -
50. si:dkey-169l5.3 si:dkey-169l5.3 239 1 - 1.000 - - - - - - -
51. AL844567.1_1 AL844567.1_1 34 1 - 1.000 - - - - - - -
52. si:ch211-162i8.2 ENSDARG00000096041 4 1 - 1.000 - - - - - - - si:ch211-162i8.2 [Source:ZFIN;Acc:ZDB-GENE-110913-56]
53. CR759816.1 ENSDARG00000098977 27 1 - 1.000 - - - - - - -
54. si:dkey-6a5.10 si:dkey-6a5.10 17 1 - 1.000 - - - - - - -
55. slc2a5 ENSDARG00000077875 5 1 - 1.000 - - - - - - - solute carrier family 2 (facilitated glucose/fructose transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-060222-2]
56. DBNDD1 DBNDD1 43 1 - 1.000 - - - - - - -
57. sdhda ENSDARG00000055712 50 1 - 1.000 - - - - - - - succinate dehydrogenase complex, subunit D, integral membrane protein a [Source:ZFIN;Acc:ZDB-GENE-040718-192]
58. si:ch211-186e20.2 ENSDARG00000074712 0 1 - 1.000 - - - - - - - si:ch211-186e20.2 [Source:ZFIN;Acc:ZDB-GENE-110407-8]
59. pvalb6 ENSDARG00000009311, ENSDARG00000113947 248 1 - 1.000 - - - - - - - parvalbumin 6 [Source:ZFIN;Acc:ZDB-GENE-040912-95]
60. BX323793.2 BX323793.2 61 1 - 1.000 - - - - - - -
61. U11 U11 11 1 - 1.000 - - - - - - -
62. ggt1l2.1 ENSDARG00000075055 0 1 - - - - - - - 1.000 - gamma-glutamyltransferase 1 like 2.1 [Source:ZFIN;Acc:ZDB-GENE-090312-32]
63. si:dkey-9c18.1 si:dkey-9c18.1 3 1 - - - - - - - 1.000 -
64. rcv1 rcv1 77 1 - 1.000 - - - - - - -
65. CU694319.1 CU694319.1 72 1 - 1.000 - - - - - - -
66. trim35-3_1 ENSDARG00000052255 6 1 - 1.000 - - - - - - - tripartite motif containing 35-3 [Source:ZFIN;Acc:ZDB-GENE-070912-56]
67. cabp2a ENSDARG00000052016 19 1 - 1.000 - - - - - - - calcium binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-050913-25]
68. fgf9 ENSDARG00000078625 2 1 - 1.000 - - - - - - - fibroblast growth factor 9 [Source:ZFIN;Acc:ZDB-GENE-070424-238]
69. CDCP1 ENSDARG00000110186 0 1 - 1.000 - - - - - - - CUB domain containing protein 1 [Source:HGNC Symbol;Acc:HGNC:24357]
70. CABZ01118769.1 CABZ01118769.1 9 1 - - - - - - - 1.000 -
71. MSH4 ENSDARG00000075826 37 1 - 1.000 - - - - - - - mutS homolog 4 [Source:ZFIN;Acc:ZDB-GENE-131121-643]
72. si:dkey-79f11.1 si:dkey-79f11.1 91 1 - 1.000 - - - - - - -
73. fgf14 ENSDARG00000040982 5 1 - - - - - - - 1.000 - fibroblast growth factor 14 [Source:ZFIN;Acc:ZDB-GENE-060506-1]
74. U6_11 U6_11 0 1 - 1.000 - - - - - - -
75. GABRR1 ENSDARG00000043902 71 1 - 1.000 - - - - - - - gamma-aminobutyric acid (GABA) A receptor, rho 1 [Source:ZFIN;Acc:ZDB-GENE-040724-212]
76. zgc:171482 ENSDARG00000074415 0 1 - 1.000 - - - - - - - zgc:171482 [Source:ZFIN;Acc:ZDB-GENE-080204-84]
77. st6galnac1.1 ENSDARG00000043814 95 1 - 1.000 - - - - - - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-041014-160]
78. slc22a7b slc22a7b 11 1 - 1.000 - - - - - - -
79. gria4a ENSDARG00000037496 88 1 - 1.000 - - - - - - - glutamate receptor, ionotropic, AMPA 4a [Source:ZFIN;Acc:ZDB-GENE-020125-7]
80. si:dkeyp-27e10.7 si:dkeyp-27e10.7 5 1 - - - - - - - 1.000 -
81. mab21l3 ENSDARG00000076013, ENSDARG00000112160 35 1 - 1.000 - - - - - - - mab-21-like 3 [Source:ZFIN;Acc:ZDB-GENE-070912-242]
82. si:ch211-15o14.2 si:ch211-15o14.2 6 1 - 1.000 - - - - - - -
83. olfcg4 ENSDARG00000099773 1 1 - 1.000 - - - - - - - olfactory receptor C family, g4 [Source:ZFIN;Acc:ZDB-GENE-060503-66]
84. akap1a ENSDARG00000089802 5 1 - - - - - - - 1.000 - A kinase (PRKA) anchor protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5980]
85. si:dkey-220k22.3 ENSDARG00000094693 166 1 - 1.000 - - - - - - - si:dkey-220k22.3 [Source:ZFIN;Acc:ZDB-GENE-060526-257]
86. si:ch211-155e24.5 si:ch211-155e24.5 2 1 - 1.000 - - - - - - -
87. npffr2.1 npffr2.1 60 1 - 1.000 - - - - - - -
88. si:dkey-88e10.2 si:dkey-88e10.2 7 1 - 1.000 - - - - - - -
89. slc12a2 ENSDARG00000104573 59 1 - 1.000 - - - - - - - solute carrier family 12 (sodium/potassium/chloride transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-040625-53]
90. C1GALT1_1 C1GALT1_1 1 1 - 1.000 - - - - - - -
91. CR936975.1 ENSDARG00000096862 22 1 - 1.000 - - - - - - -
92. FP325123.1_1 ENSDARG00000105359 38 1 - 1.000 - - - - - - - Histone H3.2 [Source:UniProtKB/Swiss-Prot;Acc:Q4QRF4]
93. BX571853.2 ENSDARG00000110441 21 1 - 1.000 - - - - - - -
94. si:ch211-272h9.5 ENSDARG00000092167 8 1 - 1.000 - - - - - - - si:ch211-272h9.5 [Source:ZFIN;Acc:ZDB-GENE-070705-167]
95. ZNF337_23 ZNF337_23 39 1 - 1.000 - - - - - - -
96. asf1ba_1 ENSDARG00000101037 3 1 - 1.000 - - - - - - - anti-silencing function 1Ba histone chaperone [Source:ZFIN;Acc:ZDB-GENE-031118-197]
97. C21H11orf82 C21H11orf82 50 1 - 1.000 - - - - - - -
98. CR854963.2 ENSDARG00000114235 82 1 - 1.000 - - - - - - -
99. FBXO10 ENSDARG00000061936, ENSDARG00000116317 3 1 - - - - - - - 1.000 - F-box protein 10 [Source:ZFIN;Acc:ZDB-GENE-090313-270]
100. echdc1 68 1 - 1.000 - - - - - - - enoyl CoA hydratase domain containing 1, transcript variant 1

There are 610 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA