Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for trrap

Gene Name Gene ID Reads Annotation
trrap ENSDARG00000100623 3429 transformation/transcription domain-associated protein [Source:ZFIN;Acc:ZDB-GENE-050809-47]










Genes with expression patterns similar to trrap

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. trrap ENSDARG00000100623 3429 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 transformation/transcription domain-associated protein [Source:ZFIN;Acc:ZDB-GENE-050809-47]
2. polr2gl ENSDARG00000056127 1771 2.987 0.732 - 0.725 - - - 0.821 0.709 - polymerase (RNA) II (DNA directed) polypeptide G-like [Source:ZFIN;Acc:ZDB-GENE-030131-2808]
3. sae1 ENSDARG00000010487 2028 2.984 - - 0.723 - - - 0.716 0.834 0.711 SUMO1 activating enzyme subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040625-21]
4. gins1 ENSDARG00000007624 1421 2.886 0.743 - - 0.725 0.702 - 0.716 - - GINS complex subunit 1 (Psf1 homolog) [Source:ZFIN;Acc:ZDB-GENE-041010-184]
5. pdap1a ENSDARG00000092546, ENSDARG00000116115 7617 2.409 - - - - - - 0.872 0.826 0.711 pdgfa associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1693]
6. lbr ENSDARG00000014013 4835 2.313 - 0.824 - - - - 0.769 - 0.720 lamin B receptor [Source:ZFIN;Acc:ZDB-GENE-030804-11]
7. uhrf1 ENSDARG00000103409 3282 2.291 - - 0.759 0.716 - - - 0.816 - ubiquitin-like with PHD and ring finger domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2039]
8. morf4l1 ENSDARG00000041155, ENSDARG00000111898, ENSDARG00000111981 4044 2.256 - - 0.734 - 0.708 - - 0.814 - mortality factor 4 like 1 [Source:ZFIN;Acc:ZDB-GENE-040718-348]
9. tgif1 ENSDARG00000059337 4020 2.223 0.702 - - 0.744 - - - - 0.777 TGFB-induced factor homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030131-475]
10. ssu72 ENSDARG00000031216 2350 2.214 - 0.782 0.703 - - - 0.729 - - SSU72 homolog, RNA polymerase II CTD phosphatase [Source:ZFIN;Acc:ZDB-GENE-040426-1689]
11. igf1ra ENSDARG00000027423, ENSDARG00000113936, ENSDARG00000116846 2228 2.206 - 0.709 - - - - 0.717 - 0.780 insulin-like growth factor 1a receptor [Source:ZFIN;Acc:ZDB-GENE-020503-1]
12. nasp ENSDARG00000039208, ENSDARG00000114134 873 2.179 - 0.729 - 0.702 - - 0.748 - - nuclear autoantigenic sperm protein (histone-binding) [Source:ZFIN;Acc:ZDB-GENE-030131-5511]
13. tradd ENSDARG00000036057, ENSDARG00000117083 1583 2.17 - 0.739 - - - - 0.730 0.701 - tnfrsf1a-associated via death domain [Source:ZFIN;Acc:ZDB-GENE-000511-5]
14. fam60al 2846 2.164 - 0.717 - 0.740 - - - 0.707 - family with sequence similarity 60, member A, like
15. nsd1a ENSDARG00000060016 2974 1.689 - - - - - - 0.874 0.815 - nuclear receptor binding SET domain protein 1a [Source:ZFIN;Acc:ZDB-GENE-080519-3]
16. si:dkey-19e4.5 ENSDARG00000089886 2562 1.683 - - - - - - 0.796 0.887 - si:dkey-19e4.5 [Source:ZFIN;Acc:ZDB-GENE-030131-1852]
17. prmt1 ENSDARG00000010246 11311 1.663 - - - - - - 0.778 0.885 - protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
18. PELP1 ENSDARG00000079313 5771 1.654 - - - 0.800 - - - 0.854 - proline, glutamate and leucine rich protein 1 [Source:ZFIN;Acc:ZDB-GENE-140106-164]
19. sf3a1 ENSDARG00000041887 6702 1.649 - - - - - - 0.783 0.866 - splicing factor 3a, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030616-156]
20. dnmbp ENSDARG00000074121 2711 1.644 - - - - - - 0.761 0.883 - dynamin binding protein [Source:ZFIN;Acc:ZDB-GENE-101026-2]
21. cdk2ap2 ENSDARG00000103145 8024 1.644 - - - - - - 0.823 - 0.821 cyclin-dependent kinase 2 associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-040718-35]
22. vps45 ENSDARG00000061180 791 1.629 - - - - - - 0.822 0.807 - vacuolar protein sorting 45 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060503-526]
23. e2f4 ENSDARG00000101578, ENSDARG00000109320 1783 1.627 - - - - - - - 0.829 0.798 E2F transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2773]
24. GAL3ST4 ENSDARG00000079712 796 1.623 - 0.782 - - - - 0.841 - - galactose-3-O-sulfotransferase 4 [Source:ZFIN;Acc:ZDB-GENE-080408-1]
25. rangap1b ENSDARG00000056059, ENSDARG00000115814 1109 1.607 - - - - - 0.745 0.862 - - Ran GTPase activating protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1921]
26. cldn5a ENSDARG00000043716 3865 1.606 - - - - - - - 0.862 0.744 claudin 5a [Source:ZFIN;Acc:ZDB-GENE-040426-2442]
27. sec11a ENSDARG00000008936, ENSDARG00000116303 6529 1.605 - - - - - - 0.795 0.810 - SEC11 homolog A, signal peptidase complex subunit [Source:ZFIN;Acc:ZDB-GENE-040718-227]
28. tnks tnks 1695 1.604 - 0.816 - - - - - 0.788 -
29. arpp19a ENSDARG00000032532, ENSDARG00000109679 5102 1.601 - - 0.731 - - 0.870 - - - cAMP-regulated phosphoprotein 19a [Source:ZFIN;Acc:ZDB-GENE-040426-1281]
30. CCDC106 CCDC106 1908 1.596 - - - - - - 0.817 0.779 -
31. ss18 ENSDARG00000002970 2618 1.588 - - - 0.806 - - 0.782 - - synovial sarcoma translocation, chromosome 18 (H. sapiens) [Source:ZFIN;Acc:ZDB-GENE-030131-4867]
32. mtfr2 ENSDARG00000060394 482 1.587 - - - - - - 0.823 0.764 - mitochondrial fission regulator 2 [Source:ZFIN;Acc:ZDB-GENE-061013-398]
33. hells ENSDARG00000057738, ENSDARG00000112932, ENSDARG00000116012 1443 1.585 - - 0.809 - - - 0.776 - - helicase, lymphoid specific [Source:ZFIN;Acc:ZDB-GENE-030131-9923]
34. srgap1 srgap1 2320 1.584 - - 0.816 - - - 0.768 - -
35. CSK ENSDARG00000067996 476 1.581 - - - - - - 0.817 0.764 - C-terminal Src kinase [Source:ZFIN;Acc:ZDB-GENE-061103-493]
36. cdc6 ENSDARG00000009942, ENSDARG00000109602 2540 1.579 - - - - - - - 0.854 0.725 cell division cycle 6 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050506-131]
37. taf5 ENSDARG00000018325 1363 1.577 - - - - - - 0.790 0.787 - TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-051120-180]
38. KIF4A KIF4A 3322 1.575 0.767 - - - - 0.808 - - -
39. sf3a3 ENSDARG00000100114 4511 1.574 - - - 0.711 - - - 0.863 - splicing factor 3a, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040908-1]
40. cdk1 ENSDARG00000087554, ENSDARG00000110840 8297 1.572 - - - - - - - 0.793 0.779 cyclin-dependent kinase 1 [Source:ZFIN;Acc:ZDB-GENE-010320-1]
41. CT955967.1 ENSDARG00000099956 2885 1.571 - - - - - - - 0.798 0.773
42. kalrnb ENSDARG00000063538, ENSDARG00000111077, ENSDARG00000111084 880 1.565 - 0.799 - - - - - 0.766 - kalirin RhoGEF kinase b [Source:ZFIN;Acc:ZDB-GENE-060421-7244]
43. cwc25 ENSDARG00000003382 2134 1.563 - 0.799 - - - - - 0.764 - CWC25 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2817]
44. med27 ENSDARG00000009681 1857 1.562 - - - - - - - 0.813 0.749 mediator complex subunit 27 [Source:ZFIN;Acc:ZDB-GENE-040426-1601]
45. sde2 ENSDARG00000024124, ENSDARG00000109881 2342 1.562 - 0.820 - - - - - - 0.742 SDE2 telomere maintenance homolog (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-050417-270]
46. ndc1 ENSDARG00000021120 2417 1.56 0.779 - - - - - 0.781 - - NDC1 transmembrane nucleoporin [Source:ZFIN;Acc:ZDB-GENE-030131-7176]
47. rnf121 ENSDARG00000060282 1809 1.559 - - - - - - 0.774 0.785 - ring finger protein 121 [Source:ZFIN;Acc:ZDB-GENE-050809-3]
48. POLE4 ENSDARG00000013016 848 1.556 - - - - - 0.743 - 0.813 - polymerase (DNA-directed), epsilon 4, accessory subunit [Source:ZFIN;Acc:ZDB-GENE-050522-309]
49. dram2b ENSDARG00000044241 503 1.553 - - - - - 0.804 0.749 - - DNA-damage regulated autophagy modulator 2b [Source:ZFIN;Acc:ZDB-GENE-040625-141]
50. axin2 ENSDARG00000100149 4223 1.553 - 0.767 - - - - - 0.786 - axin 2 (conductin, axil) [Source:ZFIN;Acc:ZDB-GENE-000403-2]
51. si:ch73-46j18.5 ENSDARG00000092467 6002 1.549 - 0.728 - - - - 0.821 - - si:ch73-46j18.5 [Source:ZFIN;Acc:ZDB-GENE-030131-7892]
52. smarca5 ENSDARG00000052348 15433 1.549 - - - - - - 0.822 - 0.727 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:ZFIN;Acc:ZDB-GENE-021125-1]
53. serinc5 ENSDARG00000008153 2863 1.549 - - - - - - 0.798 - 0.751 serine incorporator 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2918]
54. asap1a ENSDARG00000029463 1566 1.548 - - - - - - 0.740 0.808 - ArfGAP with SH3 domain, ankyrin repeat and PH domain 1a [Source:ZFIN;Acc:ZDB-GENE-070912-129]
55. polr2l ENSDARG00000058349, ENSDARG00000113402 3300 1.545 - - - - - - 0.735 0.810 - polymerase (RNA) II (DNA directed) polypeptide L [Source:ZFIN;Acc:ZDB-GENE-050522-181]
56. fam219aa ENSDARG00000016396 1788 1.543 - - - - - - 0.748 0.795 - family with sequence similarity 219, member Aa [Source:ZFIN;Acc:ZDB-GENE-040801-110]
57. whsc1 1701 1.54 - - - - - - 0.759 0.781 - Wolf-Hirschhorn syndrome candidate 1
58. E2F2 E2F2 871 1.539 - - - - - - - 0.818 0.721
59. dlgap4a ENSDARG00000060849 1813 1.534 - - - - 0.750 - - - 0.784 discs, large (Drosophila) homolog-associated protein 4a [Source:ZFIN;Acc:ZDB-GENE-080219-51]
60. txndc9 ENSDARG00000069853, ENSDARG00000110688 1519 1.533 - - - - - 0.736 - - 0.797 thioredoxin domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-030131-8569]
61. gins2 ENSDARG00000002304 1187 1.531 - - - 0.740 - - 0.791 - - GINS complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050419-19]
62. dag1 ENSDARG00000016153 10886 1.53 - 0.743 0.787 - - - - - - dystroglycan 1 [Source:ZFIN;Acc:ZDB-GENE-021223-1]
63. rab11fip4a ENSDARG00000090170 839 1.529 - 0.714 - - - - 0.815 - - RAB11 family interacting protein 4 (class II) a [Source:ZFIN;Acc:ZDB-GENE-040718-266]
64. med29 ENSDARG00000026448, ENSDARG00000109733 972 1.526 - - - - - - 0.706 0.820 - mediator complex subunit 29 [Source:ZFIN;Acc:ZDB-GENE-021217-1]
65. ppig ENSDARG00000044431 3427 1.524 - 0.751 - - - - 0.773 - - peptidylprolyl isomerase G (cyclophilin G) [Source:ZFIN;Acc:ZDB-GENE-040426-2822]
66. sf1 ENSDARG00000008188 5142 1.52 - - - - - - 0.809 - 0.711 splicing factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2492]
67. rbb4 rbb4 15541 1.517 - - - - - - - 0.817 0.700
68. polr2a ENSDARG00000099966 5706 1.517 - - - - - - 0.785 - 0.732 polymerase (RNA) II (DNA directed) polypeptide A [Source:ZFIN;Acc:ZDB-GENE-041008-78]
69. HNRNPAB HNRNPAB 22267 1.516 - - - - - - 0.753 - 0.763
70. daxx ENSDARG00000000729 734 1.515 - - - - - - 0.737 0.778 - death-domain associated protein [Source:ZFIN;Acc:ZDB-GENE-010110-3]
71. ddx19 ENSDARG00000005699 4602 1.513 - - - - - - - 0.778 0.735 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 19 (DBP5 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-020419-30]
72. pop7 ENSDARG00000036394 1684 1.512 - - - - - 0.705 0.807 - - POP7 homolog, ribonuclease P/MRP subunit [Source:ZFIN;Acc:ZDB-GENE-041010-88]
73. tctex1d2 ENSDARG00000054255 320 1.512 - - - - - 0.760 0.752 - - Tctex1 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-081104-219]
74. zcchc10 ENSDARG00000091092 1333 1.509 - - - - - - 0.726 0.783 - zinc finger, CCHC domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-030131-6172]
75. gnao1b ENSDARG00000036058, ENSDARG00000112730 1951 1.509 - - - - - 0.808 0.701 - - guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, b [Source:ZFIN;Acc:ZDB-GENE-040426-1693]
76. srsf4 ENSDARG00000105293 9657 1.509 - - - - - 0.712 0.797 - - serine/arginine-rich splicing factor 4 [Source:ZFIN;Acc:ZDB-GENE-030131-591]
77. PATZ1 ENSDARG00000076584 1116 1.508 - - - - - - 0.752 - 0.756 POZ (BTB) and AT hook containing zinc finger 1 [Source:ZFIN;Acc:ZDB-GENE-111223-4]
78. emc6 ENSDARG00000035282 4981 1.508 - 0.775 - - - - - 0.733 - ER membrane protein complex subunit 6 [Source:ZFIN;Acc:ZDB-GENE-030131-9164]
79. rbm14a ENSDARG00000012723, ENSDARG00000114603 3802 1.508 - - - 0.708 - - - 0.800 - RNA binding motif protein 14a [Source:ZFIN;Acc:ZDB-GENE-050522-496]
80. rpa3 ENSDARG00000002613 2923 1.502 0.736 - - - - - - 0.766 - replication protein A3 [Source:ZFIN;Acc:ZDB-GENE-040426-977]
81. cnot6 cnot6 7029 1.498 - - - 0.713 - - 0.785 - -
82. trim71 ENSDARG00000075593 2750 1.497 - 0.746 - - - - 0.751 - - tripartite motif containing 71, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040128-1]
83. trim8b ENSDARG00000060729, ENSDARG00000115043 1528 1.497 - 0.774 0.723 - - - - - - tripartite motif containing 8b [Source:ZFIN;Acc:ZDB-GENE-030131-4325]
84. kpnb3 ENSDARG00000040245 7967 1.496 - 0.767 - 0.729 - - - - - karyopherin (importin) beta 3 [Source:ZFIN;Acc:ZDB-GENE-030424-2]
85. stk24b ENSDARG00000023878 1054 1.494 - 0.787 0.707 - - - - - - serine/threonine kinase 24b (STE20 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-2841]
86. cacybp ENSDARG00000014731 2650 1.493 - 0.713 - - - - - 0.780 - calcyclin binding protein [Source:ZFIN;Acc:ZDB-GENE-040426-2579]
87. alg8 ENSDARG00000044627, ENSDARG00000114612 325 1.493 - - - - - 0.727 - 0.766 - ALG8, alpha-1,3-glucosyltransferase [Source:ZFIN;Acc:ZDB-GENE-030131-5812]
88. nr2f2 ENSDARG00000040926 5213 1.493 - - - - - 0.731 0.762 - - nuclear receptor subfamily 2, group F, member 2 [Source:ZFIN;Acc:ZDB-GENE-990415-252]
89. ppp2r1a ppp2r1a 11291 1.492 - 0.751 - - - - 0.741 - -
90. GANAB_2 GANAB_2 3210 1.491 - - - - - - 0.788 0.703 -
91. syt1a ENSDARG00000030614 542 1.491 - - - - - 0.712 - 0.779 - synaptotagmin Ia [Source:ZFIN;Acc:ZDB-GENE-040718-165]
92. zswim5 ENSDARG00000055900 4243 1.49 - - - - - - - 0.785 0.705 zinc finger, SWIM-type containing 5 [Source:ZFIN;Acc:ZDB-GENE-030925-30]
93. CR954963.1 ENSDARG00000097153 1135 1.49 - - - - - - 0.724 0.766 -
94. ZNF576 ZNF576 1447 1.488 - - - - - - - 0.779 0.709
95. LEPROTL1 ENSDARG00000104871 3019 1.488 - 0.759 - - - - 0.729 - - leptin receptor overlapping transcript like 1 [Source:HGNC Symbol;Acc:HGNC:6555]
96. rnf40 ENSDARG00000054201, ENSDARG00000114667 2440 1.486 - - - - - - 0.706 0.780 - ring finger protein 40 [Source:ZFIN;Acc:ZDB-GENE-030131-6607]
97. nkd1 ENSDARG00000020053 4450 1.484 0.715 - - - - - - 0.769 - naked cuticle homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-061108-3]
98. lmo4b ENSDARG00000054749, ENSDARG00000115402 1397 1.482 - 0.782 - - - - - 0.700 - LIM domain only 4b [Source:ZFIN;Acc:ZDB-GENE-030131-3570]
99. safb ENSDARG00000020467 5608 1.481 - - - - - - - 0.778 0.703 scaffold attachment factor B [Source:ZFIN;Acc:ZDB-GENE-030131-698]
100. nudc ENSDARG00000104837 1798 1.48 - - - - - - - 0.744 0.736 nudC nuclear distribution protein [Source:ZFIN;Acc:ZDB-GENE-040426-899]

There are 1520 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA