Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for trpm5

Gene Name Gene ID Reads Annotation
trpm5 ENSDARG00000059792 3 transient receptor potential cation channel, subfamily M, member 5 [Source:ZFIN;Acc:ZDB-GENE-060503-736]










Genes with expression patterns similar to trpm5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. trpm5 ENSDARG00000059792 3 4 - - 1.000 - - 1.000 - 1.000 1.000 transient receptor potential cation channel, subfamily M, member 5 [Source:ZFIN;Acc:ZDB-GENE-060503-736]
2. kcnh3 ENSDARG00000069560 4 2 - - - - - 1.000 - - 1.000 potassium voltage-gated channel, subfamily H (eag-related), member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-23]
3. ZNF70_10 ZNF70_10 0 2 - - 1.000 - - - - - 1.000
4. GMEB2 ENSDARG00000093240 6 2 - - 1.000 - - 1.000 - - - glucocorticoid modulatory element binding protein 2 [Source:HGNC Symbol;Acc:HGNC:4371]
5. BX323882.1 ENSDARG00000101656 2 2 - - 1.000 - - - - - 1.000 butyrophilin subfamily 2 member A2-like [Source:NCBI gene;Acc:563995]
6. ccdc14 ENSDARG00000098734 3 2 - - - - - 1.000 - - 1.000 coiled-coil domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-120215-134]
7. OTOS ENSDARG00000108475 180 1.904 - - 0.904 - - 1.000 - - - otospiralin [Source:ZFIN;Acc:ZDB-GENE-120601-1]
8. si:ch211-105d18.7 si:ch211-105d18.7 6 1.783 - - 0.783 - - - - - 1.000
9. ctsl.1 ENSDARG00000003902 25 1.777 - - - - - 0.777 - - 1.000 cathepsin L.1 [Source:ZFIN;Acc:ZDB-GENE-040718-61]
10. adipoqb ENSDARG00000100086 5 1.777 - - 0.777 - - - - - 1.000 adiponectin, C1Q and collagen domain containing, b [Source:ZFIN;Acc:ZDB-GENE-060825-220]
11. PLEKHA2 PLEKHA2 43 1.594 - - - - - 0.871 - 0.723 -
12. si:dkey-43b14.6 si:dkey-43b14.6 20 1.462 - - 0.746 - - - - 0.716 -
13. ftr19_1 ENSDARG00000094131 1 1 - - - - - - - - 1.000 finTRIM family, member 19 [Source:ZFIN;Acc:ZDB-GENE-090506-5]
14. ZNF135_1 ZNF135_1 1 1 - - 1.000 - - - - - -
15. NAALADL1 NAALADL1 2 1 - - - - - - - - 1.000
16. CR933818.1 CR933818.1 1 1 - - - - - - - - 1.000
17. ENSDARG00000088389 ENSDARG00000088389 2 1 - - 1.000 - - - - - -
18. SNORA32 SNORA32 10 1 - - - - - - - - 1.000
19. hs3st4 ENSDARG00000052648 6 1 - - 1.000 - - - - - - heparan sulfate (glucosamine) 3-O-sulfotransferase 4 [Source:ZFIN;Acc:ZDB-GENE-070202-8]
20. ZNF608 3 1 - - 1.000 - - - - - - zinc finger protein 608, transcript variant X2
21. CR356223.1 ENSDARG00000093865 1 1 - - - - - 1.000 - - -
22. ZNF557 ZNF557 1 1 - - - - - - - - 1.000
23. fam207a_1 ENSDARG00000071500 1 1 - - 1.000 - - - - - - family with sequence similarity 207, member A [Source:ZFIN;Acc:ZDB-GENE-060825-113]
24. plcb4 1 1 - - 1.000 - - - - - - phospholipase C, beta 4
25. dnah7l dnah7l 2 1 - - 1.000 - - - - - -
26. ccdc41 ccdc41 97 1 - - - - - 1.000 - - -
27. si:dkey-13d5.1 si:dkey-13d5.1 3 1 - - - - - - - - 1.000
28. si:rp71-36n21.1 93 1 - - 1.000 - - - - - - si:rp71-36n21.1
29. kl ENSDARG00000079862 13 1 - - 1.000 - - - - - - klotho [Source:ZFIN;Acc:ZDB-GENE-110221-1]
30. si:ch211-30g3.4 si:ch211-30g3.4 3 1 - - - - - - - - 1.000
31. dok1a ENSDARG00000078108 9 1 - - - - - 1.000 - - - docking protein 1a [Source:ZFIN;Acc:ZDB-GENE-080721-2]
32. il12bb ENSDARG00000054542 6 1 - - - - - 1.000 - - - interleukin 12B, b [Source:ZFIN;Acc:ZDB-GENE-030131-7937]
33. mir142a 20 1 - - - - - - - - 1.000 microRNA 142a
34. si:dkey-166k12.1 ENSDARG00000054690 0 1 - - - - - - - - 1.000 si:dkey-166k12.1 [Source:ZFIN;Acc:ZDB-GENE-120215-78]
35. POGK POGK 1 1 - - - - - 1.000 - - -
36. slc30a2 ENSDARG00000021305 4 1 - - 1.000 - - - - - - solute carrier family 30 (zinc transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-041014-347]
37. syt6a ENSDARG00000076730 4 1 - - - - - 1.000 - - - synaptotagmin VIa [Source:ZFIN;Acc:ZDB-GENE-090601-2]
38. MON1B MON1B 1 1 - - - - - - - - 1.000
39. foxi1 ENSDARG00000104566 176 1 - - - - - 1.000 - - - forkhead box i1 [Source:ZFIN;Acc:ZDB-GENE-030505-1]
40. ARHGAP40 ARHGAP40 2 1 - - - - - - - - 1.000
41. efna5b ENSDARG00000098625 1 1 - - 1.000 - - - - - - ephrin-A5b [Source:ZFIN;Acc:ZDB-GENE-980526-186]
42. syt15 ENSDARG00000079926 8 1 - - - - - 1.000 - - - synaptotagmin XV [Source:ZFIN;Acc:ZDB-GENE-090527-2]
43. CABZ01084613.1 CABZ01084613.1 22 1 - - - - - - - - 1.000
44. BX004880.2 BX004880.2 83 1 - - - - - 1.000 - - -
45. tectb ENSDARG00000045268 3 1 - - 1.000 - - - - - - tectorin beta [Source:ZFIN;Acc:ZDB-GENE-041212-16]
46. asz1 ENSDARG00000004823, ENSDARG00000116151 8 1 - - - - - - - - 1.000 ankyrin repeat, SAM and basic leucine zipper domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-988]
47. si:dkeyp-100a5.3 si:dkeyp-100a5.3 5 1 - - 1.000 - - - - - -
48. BX323854.4 BX323854.4 3 1 - - - - - 1.000 - - -
49. CA4 CA4 1 1 - - 1.000 - - - - - -
50. pnpla4 ENSDARG00000069834, ENSDARG00000110613 15 1 - - 1.000 - - - - - - patatin-like phospholipase domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-070410-74]
51. HTRA2_7 HTRA2_7 1 1 - - 1.000 - - - - - -
52. fam166b ENSDARG00000100292 14 1 - - - - - 1.000 - - - family with sequence similarity 166, member B [Source:ZFIN;Acc:ZDB-GENE-070209-41]
53. BX914198.1 BX914198.1 5 1 - - - - - - - - 1.000
54. txlng ENSDARG00000001969 7 1 - - - - - - - - 1.000 taxilin gamma [Source:ZFIN;Acc:ZDB-GENE-060616-122]
55. PEG3_33 PEG3_33 0 1 - - 1.000 - - - - - -
56. trim35-23 ENSDARG00000102368, ENSDARG00000113611 1 1 - - 1.000 - - - - - - tripartite motif containing 35-23 [Source:ZFIN;Acc:ZDB-GENE-060503-295]
57. vtg1 ENSDARG00000092233 1 1 - - - - - - - - 1.000 vitellogenin 1 [Source:ZFIN;Acc:ZDB-GENE-001201-1]
58. si:dkey-246e3.4 ENSDARG00000086390 50 1 - - 1.000 - - - - - - si:dkey-246e3.4 [Source:ZFIN;Acc:ZDB-GENE-130531-58]
59. hdhd2 ENSDARG00000024728 5 1 - - - - - - - - 1.000 haloacid dehalogenase-like hydrolase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-050320-37]
60. OGFR ENSDARG00000037837 4 1 - - 1.000 - - - - - - opioid growth factor receptor [Source:ZFIN;Acc:ZDB-GENE-030131-377]
61. si:ch211-160d14.9 8 1 - - - - - - - - 1.000 si:ch211-160d14.9, transcript variant X1
62. CABZ01060813.1 CABZ01060813.1 12 1 - - - - - 1.000 - - -
63. si:ch73-256j6.3 ENSDARG00000094604 0 1 - - - - - - - - 1.000 si:ch73-256j6.3 [Source:ZFIN;Acc:ZDB-GENE-070705-224]
64. slc13a1 ENSDARG00000045638, ENSDARG00000114835 13 1 - - 1.000 - - - - - - solute carrier family 13 member 1 [Source:ZFIN;Acc:ZDB-GENE-031222-3]
65. CR318629.1 CR318629.1 7 1 - - 1.000 - - - - - -
66. timd4 ENSDARG00000077257 4 1 - - 1.000 - - - - - - T cell immunoglobulin and mucin domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-080303-10]
67. HMGXB3 ENSDARG00000077823 2 1 - - - - - 1.000 - - - HMG box domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-111012-1]
68. syndig1l ENSDARG00000042390, ENSDARG00000113400 17 1 - - - - - 1.000 - - - synapse differentiation inducing 1-like [Source:ZFIN;Acc:ZDB-GENE-041001-116]
69. gcdhl gcdhl 38 1 - - 1.000 - - - - - -
70. ZBED1 ZBED1 2 1 - - 1.000 - - - - - -
71. nsun5_1 ENSDARG00000043209 3 1 - - 1.000 - - - - - - NOP2/Sun domain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2476]
72. CABZ01030033.1 ENSDARG00000117613 3 1 - - - - - - - - 1.000
73. zgc:153759 ENSDARG00000068969, ENSDARG00000092381 44 1 - - - - - 1.000 - - - zgc:153759 [Source:ZFIN;Acc:ZDB-GENE-060825-148]
74. si:ch211-234c11.1 si:ch211-234c11.1 3 1 - - 1.000 - - - - - -
75. PDE1A ENSDARG00000060875 0 1 - - - - - - - - 1.000 phosphodiesterase 1A, calmodulin-dependent [Source:ZFIN;Acc:ZDB-GENE-090831-2]
76. CABZ01032454.1 CABZ01032454.1 7 1 - - 1.000 - - - - - -
77. ftr06 ENSDARG00000018506, ENSDARG00000053450 17 1 - - - - - 1.000 - - - finTRIM family, member 6 [Source:ZFIN;Acc:ZDB-GENE-070912-228]
78. CT573264.4 CT573264.4 2 1 - - - - - - - - 1.000
79. BRSK2_2 BRSK2_2 3 1 - - - - - - - - 1.000
80. v2rh11 ENSDARG00000115088 1 1 - - - - - 1.000 - - - vomeronasal 2 receptor, h11 [Source:ZFIN;Acc:ZDB-GENE-050419-222]
81. CABZ01058371.1 CABZ01058371.1 23 1 - - 1.000 - - - - - -
82. si:dkey-52l1.1 si:dkey-52l1.1 1 1 - - 1.000 - - - - - -
83. NAT14 ENSDARG00000115349 21 1 - - - - - 1.000 - - - N-acetyltransferase 14 (GCN5-related, putative) [Source:ZFIN;Acc:ZDB-GENE-060825-15]
84. zgc:174642_3 zgc:174642_3 8 1 - - - - - - - - 1.000
85. tuba7l ENSDARG00000104643 33 1 - - - - - - - - 1.000 tubulin, alpha 7 like [Source:ZFIN;Acc:ZDB-GENE-040704-78]
86. CABZ01112210.1 CABZ01112210.1 48 1 - - - - - 1.000 - - -
87. CACNA1F CACNA1F 2 1 - - 1.000 - - - - - -
88. isl1l ENSDARG00000021055, ENSDARG00000110204 4 1 - - - - - - - - 1.000 islet1, like [Source:ZFIN;Acc:ZDB-GENE-040624-1]
89. TBC1D9B 1 1 - - - - - - - - 1.000 TBC1 domain family member 9B, transcript variant X2
90. apnl ENSDARG00000090900 21 1 - - - - - - - - 1.000 actinoporin-like protein [Source:ZFIN;Acc:ZDB-GENE-030131-8907]
91. si:dkey-119g10.4 si:dkey-119g10.4 7 1 - - - - - 1.000 - - -
92. p2rx7 ENSDARG00000042440, ENSDARG00000116000 0 1 - - 1.000 - - - - - - purinergic receptor P2X, ligand-gated ion channel, 7 [Source:ZFIN;Acc:ZDB-GENE-030319-6]
93. si:dkeyp-8f4.7 si:dkeyp-8f4.7 1 1 - - 1.000 - - - - - -
94. si:dkey-65b12.13 si:dkey-65b12.13 7 1 - - 1.000 - - - - - -
95. m17 ENSDARG00000035435 28 1 - - - - - 1.000 - - - IL-6 subfamily cytokine M17 [Source:ZFIN;Acc:ZDB-GENE-060526-368]
96. ENSDARG00000063362 ENSDARG00000063362 0 1 - - 1.000 - - - - - -
97. cyp7a1a cyp7a1a 1 1 - - 1.000 - - - - - -
98. mir101a 1 1 - - - - - - - - 1.000 microRNA 101a
99. gp1bb ENSDARG00000074441 116 1 - - - - - 1.000 - - - glycoprotein Ib platelet subunit beta [Source:ZFIN;Acc:ZDB-GENE-081104-406]
100. si:dkey-209n16.2 ENSDARG00000095914 27 1 - - - - - - - - 1.000 si:dkey-209n16.2 [Source:ZFIN;Acc:ZDB-GENE-110408-44]

There are 500 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA