Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for trpm3

Gene Name Gene ID Reads Annotation
trpm3 ENSDARG00000039181 2 transient receptor potential cation channel, subfamily M, member 3 [Source:ZFIN;Acc:ZDB-GENE-060531-95]










Genes with expression patterns similar to trpm3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. trpm3 ENSDARG00000039181 2 3 - - - - 1.000 1.000 - - 1.000 transient receptor potential cation channel, subfamily M, member 3 [Source:ZFIN;Acc:ZDB-GENE-060531-95]
2. si:dkey-231k6.6 si:dkey-231k6.6 2 2 - - - - 1.000 1.000 - - -
3. BX119910.9 BX119910.9 7 2 - - - - 1.000 1.000 - - -
4. zgc:92590 ENSDARG00000040282 13 2 - - - - 1.000 1.000 - - - zgc:92590 [Source:ZFIN;Acc:ZDB-GENE-041024-15]
5. si:ch211-286b5.2 ENSDARG00000096514 6 1.957 - - - - - 1.000 - - 0.957 si:ch211-286b5.2 [Source:ZFIN;Acc:ZDB-GENE-121214-251]
6. tcf21 ENSDARG00000036869, ENSDARG00000111209 37 1.687 - - - - 0.889 - - - 0.798 transcription factor 21 [Source:ZFIN;Acc:ZDB-GENE-051113-88]
7. mfsd2aa ENSDARG00000030630 66 1.617 - - - - 0.733 0.884 - - - major facilitator superfamily domain containing 2aa [Source:ZFIN;Acc:ZDB-GENE-041114-166]
8. trim108 ENSDARG00000061762, ENSDARG00000114698 5 1 - - - - 1.000 - - - - tripartite motif containing 108 [Source:ZFIN;Acc:ZDB-GENE-060503-670]
9. BX682234.1 ENSDARG00000074732 5 1 - - - - - - - - 1.000 C-type lectin domain family 12 member B-like [Source:NCBI gene;Acc:101882781]
10. CU457819.3 ENSDARG00000105418 23 1 - - - - - 1.000 - - - Histone H3.2 [Source:UniProtKB/Swiss-Prot;Acc:Q4QRF4]
11. eif4e1b ENSDARG00000014565 12 1 - - - - - 1.000 - - - eukaryotic translation initiation factor 4E family member 1B [Source:ZFIN;Acc:ZDB-GENE-980526-127]
12. CABZ01049362.1 ENSDARG00000099508 570 1 - - - - - 1.000 - - -
13. ZNF70_9 ZNF70_9 1 1 - - - - - 1.000 - - -
14. si:dkey-26g8.4 ENSDARG00000087651, ENSDARG00000095072 8 1 - - - - - - - - 1.000 si:dkey-26g8.4 [Source:ZFIN;Acc:ZDB-GENE-121214-36]
15. CR356223.2_1 ENSDARG00000100655 1 1 - - - - 1.000 - - - -
16. BX842593.1 BX842593.1 0 1 - - - - 1.000 - - - -
17. si:dkey-111k7.3 si:dkey-111k7.3 0 1 - - - - 1.000 - - - -
18. CABZ01029902.1 CABZ01029902.1 0 1 - - - - 1.000 - - - -
19. si:dkeyp-98a7.5 0 1 - - - - 1.000 - - - - si:dkeyp-98a7.5
20. rbm22 ENSDARG00000010238 523 1 - - - - 1.000 - - - - RNA binding motif protein 22 [Source:ZFIN;Acc:ZDB-GENE-040426-2298]
21. si:ch211-113a14.14 si:ch211-113a14.14 3 1 - - - - 1.000 - - - -
22. si:busm1-160c18.1 si:busm1-160c18.1 1 1 - - - - - 1.000 - - -
23. KRT9 KRT9 7 1 - - - - 1.000 - - - -
24. prom1b ENSDARG00000034007, ENSDARG00000111216, ENSDARG00000111262 14 1 - - - - - 1.000 - - - prominin 1 b [Source:ZFIN;Acc:ZDB-GENE-031003-1]
25. ZNF384 ZNF384 3 1 - - - - - - - - 1.000
26. si:ch211-171h4.5 ENSDARG00000077337 3 1 - - - - 1.000 - - - - si:ch211-171h4.5 [Source:ZFIN;Acc:ZDB-GENE-081104-151]
27. ddr2b ENSDARG00000058695 7 1 - - - - 1.000 - - - - discoidin domain receptor tyrosine kinase 2b [Source:ZFIN;Acc:ZDB-GENE-060503-361]
28. si:dkey-256i11.4 si:dkey-256i11.4 3 1 - - - - - 1.000 - - -
29. si:dkey-208k4.7 si:dkey-208k4.7 14 1 - - - - - 1.000 - - -
30. zgc:123060_1 5 1 - - - - - - - - 1.000 zgc:123060
31. ccr6a ENSDARG00000087474 10 1 - - - - 1.000 - - - - chemokine (C-C motif) receptor 6a [Source:ZFIN;Acc:ZDB-GENE-040625-126]
32. si:ch73-17k20.1 si:ch73-17k20.1 2 1 - - - - 1.000 - - - -
33. BX120005.1 ENSDARG00000089327 1 1 - - - - - 1.000 - - - cytotoxic and regulatory T-cell molecule [Source:NCBI gene;Acc:101884219]
34. si:dkey-42l16.1 ENSDARG00000071020 1 1 - - - - - - - - 1.000 si:dkey-42l16.1 [Source:ZFIN;Acc:ZDB-GENE-050208-442]
35. si:ch211-155d24.7 si:ch211-155d24.7 17 1 - - - - - 1.000 - - -
36. cx41.8 cx41.8 7 1 - - - - - 1.000 - - -
37. sult1st6 ENSDARG00000006811 31 1 - - - - - 1.000 - - - sulfotransferase family 1, cytosolic sulfotransferase 6 [Source:ZFIN;Acc:ZDB-GENE-040718-343]
38. si:dkey-104n9.1 ENSDARG00000093042 41 1 - - - - - 1.000 - - - si:dkey-104n9.1 [Source:ZFIN;Acc:ZDB-GENE-081104-300]
39. nudt4b ENSDARG00000045878 10 1 - - - - 1.000 - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 4b [Source:ZFIN;Acc:ZDB-GENE-040912-79]
40. SOX8 SOX8 22 1 - - - - 1.000 - - - -
41. vtg2 ENSDARG00000055809, ENSDARG00000111529, ENSDARG00000114568 3 1 - - - - - - - - 1.000 vitellogenin 2 [Source:ZFIN;Acc:ZDB-GENE-001201-2]
42. zgc:109965 ENSDARG00000012126 11 1 - - - - 1.000 - - - - zgc:109965 [Source:ZFIN;Acc:ZDB-GENE-050913-21]
43. CABZ01071177.1 CABZ01071177.1 1 1 - - - - - 1.000 - - -
44. si:dkey-26g8.11 si:dkey-26g8.11 4 1 - - - - - 1.000 - - -
45. C7H10orf112 C7H10orf112 15 1 - - - - - 1.000 - - -
46. si:dkeyp-68b7.6 si:dkeyp-68b7.6 7 1 - - - - 1.000 - - - -
47. foxl2 61 1 - - - - - 1.000 - - - forkhead box L2, transcript variant X1
48. si:ch211-197g15.5 si:ch211-197g15.5 10 1 - - - - - - - - 1.000
49. APOBEC2 APOBEC2 9 1 - - - - - 1.000 - - -
50. pcdh2g16 1 1 - - - - 1.000 - - - - protocadherin 2 gamma 16
51. f8 ENSDARG00000101385 1 1 - - - - - 1.000 - - - coagulation factor VIII, procoagulant component [Source:ZFIN;Acc:ZDB-GENE-090629-2]
52. CABZ01061914.2 CABZ01061914.2 2 1 - - - - - 1.000 - - -
53. zgc:173443 ENSDARG00000034403 26 1 - - - - 1.000 - - - - zgc:173443 [Source:ZFIN;Acc:ZDB-GENE-071004-101]
54. CU467014.2 CU467014.2 1 1 - - - - - - - - 1.000
55. si:dkey-222f2.6 si:dkey-222f2.6 1 1 - - - - 1.000 - - - -
56. ccdc24 ENSDARG00000038793 7 1 - - - - 1.000 - - - - coiled-coil domain containing 24 [Source:ZFIN;Acc:ZDB-GENE-050327-18]
57. prelp ENSDARG00000070597 99 1 - - - - 1.000 - - - - proline/arginine-rich end leucine-rich repeat protein [Source:ZFIN;Acc:ZDB-GENE-080327-24]
58. CU929148.1 CU929148.1 0 1 - - - - 1.000 - - - -
59. tlr5a ENSDARG00000044415 3 1 - - - - - 1.000 - - - toll-like receptor 5a [Source:ZFIN;Acc:ZDB-GENE-040219-14]
60. gphb5 ENSDARG00000027472 8 1 - - - - - 1.000 - - - glycoprotein hormone beta 5 [Source:ZFIN;Acc:ZDB-GENE-090319-4]
61. dpyda dpyda 12 1 - - - - 1.000 - - - -
62. Metazoa_SRP_13 Metazoa_SRP_13 7 1 - - - - - 1.000 - - -
63. cd247l ENSDARG00000077240 25 1 - - - - 1.000 - - - - CD247 antigen like [Source:ZFIN;Acc:ZDB-GENE-070508-2]
64. si:ch211-117m20.4 ENSDARG00000094286 7 1 - - - - - 1.000 - - - si:ch211-117m20.4 [Source:ZFIN;Acc:ZDB-GENE-060526-20]
65. sagb ENSDARG00000038378 28 1 - - - - 1.000 - - - - S-antigen; retina and pineal gland (arrestin) b [Source:ZFIN;Acc:ZDB-GENE-050913-98]
66. illr1 ENSDARG00000059254 1 1 - - - - - - - - 1.000 immune-related, lectin-like receptor 1 [Source:ZFIN;Acc:ZDB-GENE-050311-2]
67. ENSDARG00000037617 ENSDARG00000037617 1 1 - - - - 1.000 - - - -
68. BX294653.4 BX294653.4 1 1 - - - - 1.000 - - - -
69. si:ch211-165l15.1 si:ch211-165l15.1 10 1 - - - - - - - - 1.000
70. CU695216.1 CU695216.1 0 1 - - - - 1.000 - - - -
71. ME1 ENSDARG00000053215 8 1 - - - - - 1.000 - - - malic enzyme 1, NADP(+)-dependent, cytosolic [Source:ZFIN;Acc:ZDB-GENE-061013-438]
72. ENSDARG00000088389 ENSDARG00000088389 2 1 - - - - 1.000 - - - -
73. CT027754.1 CT027754.1 0 1 - - - - 1.000 - - - -
74. si:dkey-188k17.2 7 1 - - - - - - - - 1.000 si:dkey-188k17.2
75. rprmb ENSDARG00000024006 120 1 - - - - - 1.000 - - - reprimo, TP53 dependent G2 arrest mediator candidate b [Source:ZFIN;Acc:ZDB-GENE-040426-1779]
76. hsd3b1 ENSDARG00000069926 35 1 - - - - - 1.000 - - - hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1 [Source:ZFIN;Acc:ZDB-GENE-081105-30]
77. FNDC3B FNDC3B 2 1 - - - - - 1.000 - - -
78. col5a2b ENSDARG00000024847 17 1 - - - - 1.000 - - - - collagen, type V, alpha 2b [Source:ZFIN;Acc:ZDB-GENE-110406-2]
79. CABZ01030889.1 CABZ01030889.1 4 1 - - - - 1.000 - - - -
80. agt ENSDARG00000016412 17 1 - - - - - 1.000 - - - angiotensinogen [Source:ZFIN;Acc:ZDB-GENE-030131-1205]
81. U6_10 U6_10 0 1 - - - - 1.000 - - - -
82. CU929160.1 ENSDARG00000110056 9 1 - - - - - - - - 1.000
83. Metazoa_SRP_5 Metazoa_SRP_5 2 1 - - - - 1.000 - - - -
84. DGKG ENSDARG00000062696 1 1 - - - - 1.000 - - - - diacylglycerol kinase, gamma [Source:ZFIN;Acc:ZDB-GENE-081105-39]
85. adrb1_1 ENSDARG00000007490, ENSDARG00000115574 9 1 - - - - - 1.000 - - - adrenoceptor beta 1 [Source:ZFIN;Acc:ZDB-GENE-081022-145]
86. sox32 ENSDARG00000100591 2 1 - - - - - 1.000 - - - SRY (sex determining region Y)-box 32 [Source:ZFIN;Acc:ZDB-GENE-011026-1]
87. CU694254.1 CU694254.1 4 1 - - - - - 1.000 - - -
88. cnga4 ENSDARG00000069383 6 1 - - - - - 1.000 - - - cyclic nucleotide gated channel alpha 4 [Source:ZFIN;Acc:ZDB-GENE-070912-292]
89. pde4ca ENSDARG00000013221, ENSDARG00000112137 3 1 - - - - - - - - 1.000 phosphodiesterase 4C, cAMP-specific a [Source:ZFIN;Acc:ZDB-GENE-070912-373]
90. si:ch211-120f16.3 si:ch211-120f16.3 0 1 - - - - 1.000 - - - -
91. si:ch211-86k6.3 si:ch211-86k6.3 1 1 - - - - 1.000 - - - -
92. grm3 ENSDARG00000031712, ENSDARG00000110535 30 1 - - - - 1.000 - - - - glutamate receptor, metabotropic 3 [Source:ZFIN;Acc:ZDB-GENE-061009-13]
93. BX546446.1 BX546446.1 0 1 - - - - 1.000 - - - -
94. si:dkey-252l8.1 si:dkey-252l8.1 2 1 - - - - 1.000 - - - -
95. olfcg5 ENSDARG00000102459 5 1 - - - - 1.000 - - - - olfactory receptor C family, g5 [Source:ZFIN;Acc:ZDB-GENE-060503-913]
96. CABZ01016604.1 CABZ01016604.1 12 1 - - - - - 1.000 - - -
97. gdf6b ENSDARG00000005510 106 1 - - - - - 1.000 - - - growth differentiation factor 6b [Source:ZFIN;Acc:ZDB-GENE-980526-442]
98. LPXN ENSDARG00000079315 12 1 - - - - - - - - 1.000 leupaxin [Source:ZFIN;Acc:ZDB-GENE-081105-159]
99. ptk2.2 ptk2.2 3 1 - - - - 1.000 - - - -
100. prlrb ENSDARG00000045955 12 1 - - - - - 1.000 - - - prolactin receptor b [Source:ZFIN;Acc:ZDB-GENE-070705-155]

There are 414 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA