Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for trpm1a

Gene Name Gene ID Reads Annotation
trpm1a ENSDARG00000011259, ENSDARG00000111200, ENSDARG00000112747 48 transient receptor potential cation channel, subfamily M, member 1a [Source:ZFIN;Acc:ZDB-GENE-070112-1372]










Genes with expression patterns similar to trpm1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. trpm1a ENSDARG00000011259, ENSDARG00000111200, ENSDARG00000112747 48 8 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 transient receptor potential cation channel, subfamily M, member 1a [Source:ZFIN;Acc:ZDB-GENE-070112-1372]
2. ahr1b ENSDARG00000023537 44 2.412 - 0.851 - - 0.825 - - - 0.736 aryl hydrocarbon receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050922-1]
3. hmx4 ENSDARG00000007941, ENSDARG00000115000, ENSDARG00000116208 447 2.389 0.839 - - - 0.706 0.844 - - - H6 family homeobox 4 [Source:ZFIN;Acc:ZDB-GENE-060825-142]
4. cyp2aa2 ENSDARG00000104811 77 2 1.000 1.000 - - - - - - - y cytochrome P450, family 2, subfamily AA, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-061027-232]
5. si:ch73-155e10.1 si:ch73-155e10.1 13 1.922 1.000 0.922 - - - - - - -
6. SERINC4 ENSDARG00000044815 45 1.887 1.000 - - - - - - - 0.887 serine incorporator 4 [Source:ZFIN;Acc:ZDB-GENE-121031-1]
7. zgc:162144 ENSDARG00000037603, ENSDARG00000109982 11 1.871 0.871 1.000 - - - - - - - zgc:162144 [Source:ZFIN;Acc:ZDB-GENE-030131-7630]
8. si:dkey-238f9.1 ENSDARG00000079446 51 1.871 0.871 1.000 - - - - - - - si:dkey-238f9.1 [Source:ZFIN;Acc:ZDB-GENE-091204-297]
9. pcgf5b ENSDARG00000052388 163 1.871 0.871 1.000 - - - - - - - polycomb group ring finger 5b [Source:ZFIN;Acc:ZDB-GENE-060512-34]
10. EPHB1 ENSDARG00000076757 20 1.844 1.000 - - - - 0.844 - - - EPH receptor B1 [Source:ZFIN;Acc:ZDB-GENE-070912-219]
11. si:ch211-110p13.9 ENSDARG00000093821 82 1.823 0.823 1.000 - - - - - - - si:ch211-110p13.9 [Source:ZFIN;Acc:ZDB-GENE-060526-9]
12. ANKRD13D ENSDARG00000098140 88 1.763 0.823 - - - - 0.940 - - - ankyrin repeat domain 13 family, member D [Source:ZFIN;Acc:ZDB-GENE-101007-3]
13. barhl2 ENSDARG00000104361, ENSDARG00000114681, ENSDARG00000115723 2000 1.755 - 0.934 - - 0.821 - - - - BarH-like homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-050913-153]
14. vsx1 ENSDARG00000056292, ENSDARG00000109766 442 1.75 - - - - - 1.000 - - 0.750 visual system homeobox 1 homolog, chx10-like [Source:ZFIN;Acc:ZDB-GENE-990415-205]
15. foxf2b ENSDARG00000070389 67 1.746 - 1.000 - - 0.746 - - - - forkhead box F2b [Source:ZFIN;Acc:ZDB-GENE-041001-130]
16. htr1ab ENSDARG00000057098, ENSDARG00000113207 92 1.738 0.865 0.873 - - - - - - - 5-hydroxytryptamine (serotonin) receptor 1A b [Source:ZFIN;Acc:ZDB-GENE-090409-2]
17. si:ch211-191a6.3 si:ch211-191a6.3 6 1.736 1.000 - - - 0.736 - - - -
18. PGBD4_4 PGBD4_4 15 1.715 0.871 - - - - 0.844 - - -
19. C25H15orf27 C25H15orf27 69 1.713 0.713 - - - - 1.000 - - -
20. rpph1 33 1.713 0.954 0.759 - - - - - - - ribonuclease P RNA component H1
21. gsx2 ENSDARG00000043322, ENSDARG00000116417 329 1.711 1.000 - - - 0.711 - - - - GS homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-041001-114]
22. fabp11b ENSDARG00000002311 354 1.709 - - - - 0.923 - - - 0.786 fatty acid binding protein 11b [Source:ZFIN;Acc:ZDB-GENE-050522-391]
23. mos ENSDARG00000069744, ENSDARG00000110060, ENSDARG00000110181 11 1.703 - 1.000 - - 0.703 - - - - v-mos Moloney murine sarcoma viral oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-040428-3]
24. slco1c1 ENSDARG00000016749 30 1.7 0.838 0.862 - - - - - - - solute carrier organic anion transporter family, member 1C1 [Source:ZFIN;Acc:ZDB-GENE-041210-50]
25. gabrd ENSDARG00000059763 52 1.646 - 0.840 - - - 0.806 - - - gamma-aminobutyric acid (GABA) A receptor, delta [Source:ZFIN;Acc:ZDB-GENE-081105-170]
26. CHD6 ENSDARG00000017244 219 1.635 0.791 - - - - 0.844 - - - chromodomain helicase DNA binding protein 6 [Source:ZFIN;Acc:ZDB-GENE-130530-559]
27. crygn2 ENSDARG00000030411 2551 1.632 0.913 - - - 0.719 - - - - crystallin, gamma N2 [Source:ZFIN;Acc:ZDB-GENE-040801-16]
28. slc7a10b ENSDARG00000051730 44 1.615 - - 0.771 - - 0.844 - - - solute carrier family 7 (neutral amino acid transporter light chain, asc system), member 10b [Source:ZFIN;Acc:ZDB-GENE-121105-2]
29. dscamb ENSDARG00000028118 82 1.597 - 0.856 - - - 0.741 - - - Down syndrome cell adhesion molecule b [Source:ZFIN;Acc:ZDB-GENE-031118-67]
30. klhl24 klhl24 40 1.595 - 0.834 - - 0.761 - - - -
31. polm ENSDARG00000103470 49 1.593 0.720 0.873 - - - - - - - polymerase (DNA directed), mu [Source:ZFIN;Acc:ZDB-GENE-040426-911]
32. me2_1 ENSDARG00000100718, ENSDARG00000114435 52 1.556 0.723 0.833 - - - - - - - malic enzyme 2, NAD(+)-dependent, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040801-147]
33. prdm1b ENSDARG00000098925 440 1.554 - 0.761 - - - - - - 0.793 PR domain containing 1b, with ZNF domain [Source:ZFIN;Acc:ZDB-GENE-080618-2]
34. pmelb ENSDARG00000033760 206 1.554 - - - - 0.838 - - - 0.716 premelanosome protein b [Source:ZFIN;Acc:ZDB-GENE-050912-2]
35. c1ql3b_1 ENSDARG00000028521, ENSDARG00000036483 16 1.554 - 0.851 - - 0.703 - - - - complement component 1, q subcomponent-like 3b [Source:ZFIN;Acc:ZDB-GENE-040426-1836]
36. cdkl5 ENSDARG00000015240 68 1.542 - 0.764 - - - 0.778 - - - cyclin-dependent kinase-like 5 [Source:ZFIN;Acc:ZDB-GENE-081022-110]
37. npb ENSDARG00000078828 230 1.537 0.740 - - - - - - - 0.797 neuropeptide B [Source:ZFIN;Acc:ZDB-GENE-040107-40]
38. APOLD1_1 APOLD1_1 590 1.511 0.705 0.806 - - - - - - -
39. hmx1 ENSDARG00000095651, ENSDARG00000109725, ENSDARG00000111765 151 1.494 - - - - 0.783 - - - 0.711 H6 family homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-080204-54]
40. cib2 ENSDARG00000102820 296 1.477 0.714 - - - - 0.763 - - - calcium and integrin binding family member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1663]
41. aaas ENSDARG00000102274 1192 1.471 0.720 0.751 - - - - - - - achalasia, adrenocortical insufficiency, alacrimia [Source:ZFIN;Acc:ZDB-GENE-030912-4]
42. C13H2orf50 C13H2orf50 87 1.458 - 0.726 - - - 0.732 - - -
43. dct ENSDARG00000006008 2466 1.436 0.713 0.723 - - - - - - - dopachrome tautomerase [Source:ZFIN;Acc:ZDB-GENE-000508-1]
44. pcdh18a ENSDARG00000089805 1096 1.43 0.722 - - - - 0.708 - - - protocadherin 18a [Source:ZFIN;Acc:ZDB-GENE-000607-1]
45. aox3 aox3 399 1.404 0.702 0.702 - - - - - - -
46. si:dkey-178e17.2 1 1 1.000 - - - - - - - - si:dkey-178e17.2, transcript variant X2
47. btr09 ENSDARG00000054805, ENSDARG00000115798 20 1 - 1.000 - - - - - - - bloodthirsty-related gene family, member 9 [Source:ZFIN;Acc:ZDB-GENE-080722-46]
48. NDUFA4L2 1 1 - 1.000 - - - - - - - NDUFA4, mitochondrial complex associated like 2
49. ebf1b ENSDARG00000069196 64 1 1.000 - - - - - - - - early B cell factor 1b [Source:ZFIN;Acc:ZDB-GENE-090814-2]
50. si:dkey-29j8.5 si:dkey-29j8.5 9 1 - 1.000 - - - - - - -
51. PTGR1 ENSDARG00000024877, ENSDARG00000115676 6 1 - 1.000 - - - - - - - prostaglandin reductase 1 [Source:ZFIN;Acc:ZDB-GENE-041212-80]
52. si:ch211-67f13.8 ENSDARG00000079155 7 1 - 1.000 - - - - - - - si:ch211-67f13.8 [Source:ZFIN;Acc:ZDB-GENE-090312-114]
53. si:ch211-171h4.7 ENSDARG00000088408 168 1 1.000 - - - - - - - - si:ch211-171h4.7 [Source:ZFIN;Acc:ZDB-GENE-120215-25]
54. si:dkey-57k2.7 ENSDARG00000060395, ENSDARG00000095191 5 1 1.000 - - - - - - - - si:dkey-57k2.7 [Source:ZFIN;Acc:ZDB-GENE-070912-559]
55. GRM8_1 GRM8_1 85 1 1.000 - - - - - - - -
56. si:dkey-122c11.4 si:dkey-122c11.4 13 1 1.000 - - - - - - - -
57. rgs11 ENSDARG00000037646 24 1 1.000 - - - - - - - - regulator of G protein signaling 11 [Source:ZFIN;Acc:ZDB-GENE-080220-46]
58. PEG3_9 PEG3_9 3 1 - 1.000 - - - - - - -
59. si:ch73-103b2.1 ENSDARG00000095944, ENSDARG00000099867 40 1 1.000 - - - - - - - - si:ch73-103b2.1 [Source:ZFIN;Acc:ZDB-GENE-110408-42]
60. mrc1b ENSDARG00000038822 73 1 - 1.000 - - - - - - - mannose receptor, C type 1b [Source:ZFIN;Acc:ZDB-GENE-070705-13]
61. gabrb2 ENSDARG00000079586 33 1 1.000 - - - - - - - - gamma-aminobutyric acid (GABA) A receptor, beta 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8196]
62. zgc:110191 zgc:110191 359 1 1.000 - - - - - - - -
63. bckdhb ENSDARG00000014676 17 1 1.000 - - - - - - - - branched chain keto acid dehydrogenase E1, beta polypeptide [Source:ZFIN;Acc:ZDB-GENE-030124-2]
64. mms19 ENSDARG00000079067 65 1 1.000 - - - - - - - - MMS19 homolog, cytosolic iron-sulfur assembly component [Source:ZFIN;Acc:ZDB-GENE-120316-2]
65. si:dkey-56e5.2 si:dkey-56e5.2 14 1 - 1.000 - - - - - - -
66. pls1 ENSDARG00000039272 39 1 1.000 - - - - - - - - plastin 1 (I isoform) [Source:ZFIN;Acc:ZDB-GENE-030131-6205]
67. si:dkey-72l14.7 si:dkey-72l14.7 3 1 1.000 - - - - - - - -
68. TXNRD2 TXNRD2 14 1 - 1.000 - - - - - - -
69. CR848784.2 ENSDARG00000111157 16 1 1.000 - - - - - - - -
70. usp47 ENSDARG00000102645 16 1 1.000 - - - - - - - - ubiquitin specific peptidase 47 [Source:ZFIN;Acc:ZDB-GENE-070719-7]
71. ptf1a ENSDARG00000014479 349 1 1.000 - - - - - - - - pancreas associated transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030616-579]
72. hist2h3c_1 ENSDARG00000094154 45 1 - 1.000 - - - - - - - histone cluster 2, H3c [Source:ZFIN;Acc:ZDB-GENE-070424-8]
73. APCDD1 ENSDARG00000098203 10 1 1.000 - - - - - - - - APC down-regulated 1 [Source:HGNC Symbol;Acc:HGNC:15718]
74. p2rx3a ENSDARG00000010477, ENSDARG00000115270 6 1 1.000 - - - - - - - - purinergic receptor P2X, ligand-gated ion channel, 3a [Source:ZFIN;Acc:ZDB-GENE-000427-3]
75. cntn5 ENSDARG00000021584 30 1 1.000 - - - - - - - - contactin 5 [Source:ZFIN;Acc:ZDB-GENE-030131-5640]
76. si:ch211-63o20.7 ENSDARG00000042000 93 1 1.000 - - - - - - - - si:ch211-63o20.7 [Source:ZFIN;Acc:ZDB-GENE-041001-194]
77. sez6l ENSDARG00000100594 35 1 1.000 - - - - - - - - seizure related 6 homolog (mouse)-like [Source:ZFIN;Acc:ZDB-GENE-091204-162]
78. CU694319.1 CU694319.1 72 1 1.000 - - - - - - - -
79. CNGB1 CNGB1 40 1 1.000 - - - - - - - -
80. CU672227.1 ENSDARG00000105807 15 1 1.000 - - - - - - - -
81. BX470254.1_1 ENSDARG00000097402 50 1 1.000 - - - - - - - -
82. ca4b ENSDARG00000042293 5 1 1.000 - - - - - - - - carbonic anhydrase IV b [Source:ZFIN;Acc:ZDB-GENE-080815-5]
83. BX119910.3 BX119910.3 7 1 1.000 - - - - - - - -
84. si:dkey-247m21.3 ENSDARG00000001906 1 1 1.000 - - - - - - - - si:dkey-247m21.3 [Source:ZFIN;Acc:ZDB-GENE-091204-249]
85. disp2 ENSDARG00000042846 53 1 - 1.000 - - - - - - - dispatched homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030915-1]
86. AL929580.1 AL929580.1 1 1 - 1.000 - - - - - - -
87. xrcc3 ENSDARG00000017928, ENSDARG00000113239 90 1 - 1.000 - - - - - - - X-ray repair complementing defective repair in Chinese hamster cells 3 [Source:ZFIN;Acc:ZDB-GENE-050320-116]
88. edil3 edil3 24 1 1.000 - - - - - - - -
89. il10ra ENSDARG00000100383 6 1 - 1.000 - - - - - - - interleukin 10 receptor, alpha [Source:ZFIN;Acc:ZDB-GENE-070905-4]
90. il15l ENSDARG00000007743, ENSDARG00000109605 17 1 - 1.000 - - - - - - - interleukin 15, like [Source:ZFIN;Acc:ZDB-GENE-041111-173]
91. lratb 3 1 - 1.000 - - - - - - - lecithin retinol acyltransferase b (phosphatidylcholine-retinol O-acyltransferase), transcript variant X2
92. zgc:154054 ENSDARG00000099923 19 1 1.000 - - - - - - - - zgc:154054 [Source:ZFIN;Acc:ZDB-GENE-061103-283]
93. BX571712.3 ENSDARG00000098050 1 1 - 1.000 - - - - - - - si:dkeyp-9a1.2 [Source:NCBI gene;Acc:103909046]
94. arhgap23b ENSDARG00000026840 6 1 - 1.000 - - - - - - - Rho GTPase activating protein 23b [Source:ZFIN;Acc:ZDB-GENE-081031-78]
95. fam19a5 fam19a5 8 1 1.000 - - - - - - - -
96. si:ch211-219a15.3 ENSDARG00000087659 12 1 - 1.000 - - - - - - - si:ch211-219a15.3 [Source:ZFIN;Acc:ZDB-GENE-060503-214]
97. si:dkeyp-87e3.3 si:dkeyp-87e3.3 68 1 1.000 - - - - - - - -
98. si:ch211-64i20.3 ENSDARG00000089934, ENSDARG00000105063 42 1 - - - - - 1.000 - - - si:ch211-64i20.3 [Source:ZFIN;Acc:ZDB-GENE-110913-55]
99. cyp3c1l2 cyp3c1l2 53 1 - 1.000 - - - - - - -
100. myl2b ENSDARG00000053424 226 1 1.000 - - - - - - - - myosin, light chain 2b, regulatory, cardiac, slow [Source:ZFIN;Acc:ZDB-GENE-060331-137]

There are 976 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA