Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for trpm1a

Gene Name Gene ID Reads Annotation
trpm1a ENSDARG00000011259, ENSDARG00000111200, ENSDARG00000112747 48 transient receptor potential cation channel, subfamily M, member 1a [Source:ZFIN;Acc:ZDB-GENE-070112-1372]










Genes with expression patterns similar to trpm1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. trpm1a ENSDARG00000011259, ENSDARG00000111200, ENSDARG00000112747 48 8 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 transient receptor potential cation channel, subfamily M, member 1a [Source:ZFIN;Acc:ZDB-GENE-070112-1372]
2. ahr1b ENSDARG00000023537 44 2.412 - 0.851 - - 0.825 - - - 0.736 aryl hydrocarbon receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050922-1]
3. hmx4 ENSDARG00000007941, ENSDARG00000115000, ENSDARG00000116208 447 2.389 0.839 - - - 0.706 0.844 - - - H6 family homeobox 4 [Source:ZFIN;Acc:ZDB-GENE-060825-142]
4. cyp2aa2 ENSDARG00000104811 77 2 1.000 1.000 - - - - - - - y cytochrome P450, family 2, subfamily AA, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-061027-232]
5. si:ch73-155e10.1 si:ch73-155e10.1 13 1.922 1.000 0.922 - - - - - - -
6. SERINC4 ENSDARG00000044815 45 1.887 1.000 - - - - - - - 0.887 serine incorporator 4 [Source:ZFIN;Acc:ZDB-GENE-121031-1]
7. pcgf5b ENSDARG00000052388 163 1.871 0.871 1.000 - - - - - - - polycomb group ring finger 5b [Source:ZFIN;Acc:ZDB-GENE-060512-34]
8. zgc:162144 ENSDARG00000037603, ENSDARG00000109982 11 1.871 0.871 1.000 - - - - - - - zgc:162144 [Source:ZFIN;Acc:ZDB-GENE-030131-7630]
9. si:dkey-238f9.1 ENSDARG00000079446 51 1.871 0.871 1.000 - - - - - - - si:dkey-238f9.1 [Source:ZFIN;Acc:ZDB-GENE-091204-297]
10. EPHB1 ENSDARG00000076757 20 1.844 1.000 - - - - 0.844 - - - EPH receptor B1 [Source:ZFIN;Acc:ZDB-GENE-070912-219]
11. si:ch211-110p13.9 ENSDARG00000093821 82 1.823 0.823 1.000 - - - - - - - si:ch211-110p13.9 [Source:ZFIN;Acc:ZDB-GENE-060526-9]
12. ANKRD13D ENSDARG00000098140 88 1.763 0.823 - - - - 0.940 - - - ankyrin repeat domain 13 family, member D [Source:ZFIN;Acc:ZDB-GENE-101007-3]
13. barhl2 ENSDARG00000104361, ENSDARG00000114681, ENSDARG00000115723 2000 1.755 - 0.934 - - 0.821 - - - - BarH-like homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-050913-153]
14. vsx1 ENSDARG00000056292, ENSDARG00000109766 442 1.75 - - - - - 1.000 - - 0.750 visual system homeobox 1 homolog, chx10-like [Source:ZFIN;Acc:ZDB-GENE-990415-205]
15. foxf2b ENSDARG00000070389 67 1.746 - 1.000 - - 0.746 - - - - forkhead box F2b [Source:ZFIN;Acc:ZDB-GENE-041001-130]
16. htr1ab ENSDARG00000057098, ENSDARG00000113207 92 1.738 0.865 0.873 - - - - - - - 5-hydroxytryptamine (serotonin) receptor 1A b [Source:ZFIN;Acc:ZDB-GENE-090409-2]
17. si:ch211-191a6.3 si:ch211-191a6.3 6 1.736 1.000 - - - 0.736 - - - -
18. PGBD4_4 PGBD4_4 15 1.715 0.871 - - - - 0.844 - - -
19. C25H15orf27 C25H15orf27 69 1.713 0.713 - - - - 1.000 - - -
20. rpph1 33 1.713 0.954 0.759 - - - - - - - ribonuclease P RNA component H1
21. gsx2 ENSDARG00000043322, ENSDARG00000116417 329 1.711 1.000 - - - 0.711 - - - - GS homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-041001-114]
22. fabp11b ENSDARG00000002311 354 1.709 - - - - 0.923 - - - 0.786 fatty acid binding protein 11b [Source:ZFIN;Acc:ZDB-GENE-050522-391]
23. mos ENSDARG00000069744, ENSDARG00000110060, ENSDARG00000110181 11 1.703 - 1.000 - - 0.703 - - - - v-mos Moloney murine sarcoma viral oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-040428-3]
24. slco1c1 ENSDARG00000016749 30 1.7 0.838 0.862 - - - - - - - solute carrier organic anion transporter family, member 1C1 [Source:ZFIN;Acc:ZDB-GENE-041210-50]
25. gabrd ENSDARG00000059763 52 1.646 - 0.840 - - - 0.806 - - - gamma-aminobutyric acid (GABA) A receptor, delta [Source:ZFIN;Acc:ZDB-GENE-081105-170]
26. CHD6 ENSDARG00000017244 219 1.635 0.791 - - - - 0.844 - - - chromodomain helicase DNA binding protein 6 [Source:ZFIN;Acc:ZDB-GENE-130530-559]
27. crygn2 ENSDARG00000030411 2551 1.632 0.913 - - - 0.719 - - - - crystallin, gamma N2 [Source:ZFIN;Acc:ZDB-GENE-040801-16]
28. slc7a10b ENSDARG00000051730 44 1.615 - - 0.771 - - 0.844 - - - solute carrier family 7 (neutral amino acid transporter light chain, asc system), member 10b [Source:ZFIN;Acc:ZDB-GENE-121105-2]
29. dscamb ENSDARG00000028118 82 1.597 - 0.856 - - - 0.741 - - - Down syndrome cell adhesion molecule b [Source:ZFIN;Acc:ZDB-GENE-031118-67]
30. klhl24 klhl24 40 1.595 - 0.834 - - 0.761 - - - -
31. polm ENSDARG00000103470 49 1.593 0.720 0.873 - - - - - - - polymerase (DNA directed), mu [Source:ZFIN;Acc:ZDB-GENE-040426-911]
32. me2_1 ENSDARG00000100718, ENSDARG00000114435 52 1.556 0.723 0.833 - - - - - - - malic enzyme 2, NAD(+)-dependent, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040801-147]
33. prdm1b ENSDARG00000098925 440 1.554 - 0.761 - - - - - - 0.793 PR domain containing 1b, with ZNF domain [Source:ZFIN;Acc:ZDB-GENE-080618-2]
34. pmelb ENSDARG00000033760 206 1.554 - - - - 0.838 - - - 0.716 premelanosome protein b [Source:ZFIN;Acc:ZDB-GENE-050912-2]
35. c1ql3b_1 ENSDARG00000028521, ENSDARG00000036483 16 1.554 - 0.851 - - 0.703 - - - - complement component 1, q subcomponent-like 3b [Source:ZFIN;Acc:ZDB-GENE-040426-1836]
36. cdkl5 ENSDARG00000015240 68 1.542 - 0.764 - - - 0.778 - - - cyclin-dependent kinase-like 5 [Source:ZFIN;Acc:ZDB-GENE-081022-110]
37. npb ENSDARG00000078828 230 1.537 0.740 - - - - - - - 0.797 neuropeptide B [Source:ZFIN;Acc:ZDB-GENE-040107-40]
38. APOLD1_1 APOLD1_1 590 1.511 0.705 0.806 - - - - - - -
39. hmx1 ENSDARG00000095651, ENSDARG00000109725, ENSDARG00000111765 151 1.494 - - - - 0.783 - - - 0.711 H6 family homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-080204-54]
40. cib2 ENSDARG00000102820 296 1.477 0.714 - - - - 0.763 - - - calcium and integrin binding family member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1663]
41. aaas ENSDARG00000102274 1192 1.471 0.720 0.751 - - - - - - - achalasia, adrenocortical insufficiency, alacrimia [Source:ZFIN;Acc:ZDB-GENE-030912-4]
42. C13H2orf50 C13H2orf50 87 1.458 - 0.726 - - - 0.732 - - -
43. dct ENSDARG00000006008 2466 1.436 0.713 0.723 - - - - - - - dopachrome tautomerase [Source:ZFIN;Acc:ZDB-GENE-000508-1]
44. pcdh18a ENSDARG00000089805 1096 1.43 0.722 - - - - 0.708 - - - protocadherin 18a [Source:ZFIN;Acc:ZDB-GENE-000607-1]
45. aox3 aox3 399 1.404 0.702 0.702 - - - - - - -
46. SNORA77 SNORA77 2 1 - 1.000 - - - - - - -
47. ca4b ENSDARG00000042293 5 1 1.000 - - - - - - - - carbonic anhydrase IV b [Source:ZFIN;Acc:ZDB-GENE-080815-5]
48. myl2b ENSDARG00000053424 226 1 1.000 - - - - - - - - myosin, light chain 2b, regulatory, cardiac, slow [Source:ZFIN;Acc:ZDB-GENE-060331-137]
49. si:dkeyp-59a8.3 si:dkeyp-59a8.3 3 1 - 1.000 - - - - - - -
50. elfn2 elfn2 1 1 1.000 - - - - - - - -
51. atxn1b ENSDARG00000060862 345 1 1.000 - - - - - - - - ataxin 1b [Source:ZFIN;Acc:ZDB-GENE-061218-2]
52. cntn5 ENSDARG00000021584 30 1 1.000 - - - - - - - - contactin 5 [Source:ZFIN;Acc:ZDB-GENE-030131-5640]
53. zgc:110789 ENSDARG00000052497, ENSDARG00000111073 171 1 1.000 - - - - - - - - zgc:110789 [Source:ZFIN;Acc:ZDB-GENE-050306-38]
54. CU179643.1 ENSDARG00000086489 25 1 - 1.000 - - - - - - -
55. si:dkey-56e5.2 si:dkey-56e5.2 14 1 - 1.000 - - - - - - -
56. BX088691.1 BX088691.1 9 1 - 1.000 - - - - - - -
57. si:dkey-56d12.4 ENSDARG00000070845 2 1 - 1.000 - - - - - - - si:dkey-56d12.4 [Source:ZFIN;Acc:ZDB-GENE-060531-147]
58. fam19a5 fam19a5 8 1 1.000 - - - - - - - -
59. mlycd ENSDARG00000104732, ENSDARG00000117073 5 1 - 1.000 - - - - - - - malonyl-CoA decarboxylase [Source:ZFIN;Acc:ZDB-GENE-070410-120]
60. xrcc3 ENSDARG00000017928, ENSDARG00000113239 90 1 - 1.000 - - - - - - - X-ray repair complementing defective repair in Chinese hamster cells 3 [Source:ZFIN;Acc:ZDB-GENE-050320-116]
61. irf3 ENSDARG00000076251 8 1 - 1.000 - - - - - - - interferon regulatory factor 3 [Source:ZFIN;Acc:ZDB-GENE-071120-7]
62. C6H21orf58 C6H21orf58 14 1 - 1.000 - - - - - - -
63. rassf2b ENSDARG00000044044, ENSDARG00000110241 26 1 - 1.000 - - - - - - - Ras association (RalGDS/AF-6) domain family member 2b [Source:ZFIN;Acc:ZDB-GENE-041221-6]
64. ch25hl2 ENSDARG00000038728 100 1 1.000 - - - - - - - - cholesterol 25-hydroxylase like 2 [Source:ZFIN;Acc:ZDB-GENE-080204-82]
65. ABCA7 ABCA7 12 1 1.000 - - - - - - - -
66. pls1 ENSDARG00000039272 39 1 1.000 - - - - - - - - plastin 1 (I isoform) [Source:ZFIN;Acc:ZDB-GENE-030131-6205]
67. mlc1 ENSDARG00000063026 29 1 1.000 - - - - - - - - megalencephalic leukoencephalopathy with subcortical cysts 1 [Source:ZFIN;Acc:ZDB-GENE-050419-145]
68. usp47 ENSDARG00000102645 16 1 1.000 - - - - - - - - ubiquitin specific peptidase 47 [Source:ZFIN;Acc:ZDB-GENE-070719-7]
69. prelp ENSDARG00000070597 99 1 1.000 - - - - - - - - proline/arginine-rich end leucine-rich repeat protein [Source:ZFIN;Acc:ZDB-GENE-080327-24]
70. si:dkey-57k2.7 ENSDARG00000060395, ENSDARG00000095191 5 1 1.000 - - - - - - - - si:dkey-57k2.7 [Source:ZFIN;Acc:ZDB-GENE-070912-559]
71. sdccag3 239 1 1.000 - - - - - - - - serologically defined colon cancer antigen 3, transcript variant X2
72. ZNF337_21 ZNF337_21 53 1 - - - - - 1.000 - - -
73. mms19 ENSDARG00000079067 65 1 1.000 - - - - - - - - MMS19 homolog, cytosolic iron-sulfur assembly component [Source:ZFIN;Acc:ZDB-GENE-120316-2]
74. asic4b ENSDARG00000004243 31 1 1.000 - - - - - - - - acid-sensing (proton-gated) ion channel family member 4b [Source:ZFIN;Acc:ZDB-GENE-040513-6]
75. MTMR3 ENSDARG00000093364, ENSDARG00000098201 11 1 - 1.000 - - - - - - - myotubularin related protein 3 [Source:ZFIN;Acc:ZDB-GENE-091204-465]
76. ARHGEF38 ENSDARG00000079377 9 1 - 1.000 - - - - - - - Rho guanine nucleotide exchange factor (GEF) 38 [Source:ZFIN;Acc:ZDB-GENE-090313-83]
77. DNAH3 ENSDARG00000068468 3 1 - 1.000 - - - - - - - dynein axonemal heavy chain 3 [Source:ZFIN;Acc:ZDB-GENE-091112-7]
78. KCNAB1 KCNAB1 918 1 1.000 - - - - - - - -
79. xdh ENSDARG00000055240 250 1 1.000 - - - - - - - - xanthine dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-070719-9]
80. cldn15b ENSDARG00000101109 4 1 - 1.000 - - - - - - - claudin 15b [Source:ZFIN;Acc:ZDB-GENE-060421-7652]
81. si:dkey-217f16.3 si:dkey-217f16.3 1 1 1.000 - - - - - - - -
82. drd2l ENSDARG00000014858 1 1 1.000 - - - - - - - - dopamine receptor D2 like [Source:ZFIN;Acc:ZDB-GENE-030910-1]
83. si:ch73-269m14.3 ENSDARG00000096305 28 1 1.000 - - - - - - - - si:ch73-269m14.3 [Source:ZFIN;Acc:ZDB-GENE-120215-13]
84. ralgapa1 ENSDARG00000076889 36 1 1.000 - - - - - - - - Ral GTPase activating protein, alpha subunit 1 (catalytic) [Source:ZFIN;Acc:ZDB-GENE-080806-1]
85. KCNJ12 KCNJ12 17 1 - 1.000 - - - - - - -
86. si:dkey-208k4.1 si:dkey-208k4.1 15 1 1.000 - - - - - - - -
87. CR318593.1_1 CR318593.1_1 8 1 1.000 - - - - - - - -
88. ptchd4 ENSDARG00000008249 17 1 1.000 - - - - - - - - patched domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-041001-178]
89. slc34a1a ENSDARG00000028824 35 1 - 1.000 - - - - - - - solute carrier family 34 (type II sodium/phosphate cotransporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-101006-3]
90. RPS11 ENSDARG00000053058 32 1 1.000 - - - - - - - - ribosomal protein S11 [Source:ZFIN;Acc:ZDB-GENE-040426-2701]
91. MPPED1 ENSDARG00000088181 117 1 1.000 - - - - - - - - metallophosphoesterase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-111104-1]
92. CNGB1 CNGB1 40 1 1.000 - - - - - - - -
93. cbln2b ENSDARG00000077151 38 1 - 1.000 - - - - - - - cerebellin 2b precursor [Source:ZFIN;Acc:ZDB-GENE-070615-12]
94. CABZ01070007.1 CABZ01070007.1 5 1 1.000 - - - - - - - -
95. v2rx3 ENSDARG00000061873 1 1 - 1.000 - - - - - - - vomeronasal 2 receptor, x3 [Source:ZFIN;Acc:ZDB-GENE-050419-262]
96. si:dkey-122c11.4 si:dkey-122c11.4 13 1 1.000 - - - - - - - -
97. rad9a ENSDARG00000056984, ENSDARG00000115514 152 1 - 1.000 - - - - - - - RAD9 checkpoint clamp component A [Source:ZFIN;Acc:ZDB-GENE-040426-935]
98. cyp46a2 cyp46a2 38 1 - 1.000 - - - - - - -
99. bckdhb ENSDARG00000014676 17 1 1.000 - - - - - - - - branched chain keto acid dehydrogenase E1, beta polypeptide [Source:ZFIN;Acc:ZDB-GENE-030124-2]
100. ZNF337_1 ZNF337_1 1 1 - 1.000 - - - - - - -

There are 976 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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