Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for trpm1a

Gene Name Gene ID Reads Annotation
trpm1a ENSDARG00000011259, ENSDARG00000111200, ENSDARG00000112747 48 transient receptor potential cation channel, subfamily M, member 1a [Source:ZFIN;Acc:ZDB-GENE-070112-1372]










Genes with expression patterns similar to trpm1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. trpm1a ENSDARG00000011259, ENSDARG00000111200, ENSDARG00000112747 48 8 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 transient receptor potential cation channel, subfamily M, member 1a [Source:ZFIN;Acc:ZDB-GENE-070112-1372]
2. ahr1b ENSDARG00000023537 44 2.412 - 0.851 - - 0.825 - - - 0.736 aryl hydrocarbon receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050922-1]
3. hmx4 ENSDARG00000007941, ENSDARG00000115000, ENSDARG00000116208 447 2.389 0.839 - - - 0.706 0.844 - - - H6 family homeobox 4 [Source:ZFIN;Acc:ZDB-GENE-060825-142]
4. cyp2aa2 ENSDARG00000104811 77 2 1.000 1.000 - - - - - - - y cytochrome P450, family 2, subfamily AA, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-061027-232]
5. si:ch73-155e10.1 si:ch73-155e10.1 13 1.922 1.000 0.922 - - - - - - -
6. SERINC4 ENSDARG00000044815 45 1.887 1.000 - - - - - - - 0.887 serine incorporator 4 [Source:ZFIN;Acc:ZDB-GENE-121031-1]
7. zgc:162144 ENSDARG00000037603, ENSDARG00000109982 11 1.871 0.871 1.000 - - - - - - - zgc:162144 [Source:ZFIN;Acc:ZDB-GENE-030131-7630]
8. pcgf5b ENSDARG00000052388 163 1.871 0.871 1.000 - - - - - - - polycomb group ring finger 5b [Source:ZFIN;Acc:ZDB-GENE-060512-34]
9. si:dkey-238f9.1 ENSDARG00000079446 51 1.871 0.871 1.000 - - - - - - - si:dkey-238f9.1 [Source:ZFIN;Acc:ZDB-GENE-091204-297]
10. EPHB1 ENSDARG00000076757 20 1.844 1.000 - - - - 0.844 - - - EPH receptor B1 [Source:ZFIN;Acc:ZDB-GENE-070912-219]
11. si:ch211-110p13.9 ENSDARG00000093821 82 1.823 0.823 1.000 - - - - - - - si:ch211-110p13.9 [Source:ZFIN;Acc:ZDB-GENE-060526-9]
12. ANKRD13D ENSDARG00000098140 88 1.763 0.823 - - - - 0.940 - - - ankyrin repeat domain 13 family, member D [Source:ZFIN;Acc:ZDB-GENE-101007-3]
13. barhl2 ENSDARG00000104361, ENSDARG00000114681, ENSDARG00000115723 2000 1.755 - 0.934 - - 0.821 - - - - BarH-like homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-050913-153]
14. vsx1 ENSDARG00000056292, ENSDARG00000109766 442 1.75 - - - - - 1.000 - - 0.750 visual system homeobox 1 homolog, chx10-like [Source:ZFIN;Acc:ZDB-GENE-990415-205]
15. foxf2b ENSDARG00000070389 67 1.746 - 1.000 - - 0.746 - - - - forkhead box F2b [Source:ZFIN;Acc:ZDB-GENE-041001-130]
16. htr1ab ENSDARG00000057098, ENSDARG00000113207 92 1.738 0.865 0.873 - - - - - - - 5-hydroxytryptamine (serotonin) receptor 1A b [Source:ZFIN;Acc:ZDB-GENE-090409-2]
17. si:ch211-191a6.3 si:ch211-191a6.3 6 1.736 1.000 - - - 0.736 - - - -
18. PGBD4_4 PGBD4_4 15 1.715 0.871 - - - - 0.844 - - -
19. C25H15orf27 C25H15orf27 69 1.713 0.713 - - - - 1.000 - - -
20. rpph1 33 1.713 0.954 0.759 - - - - - - - ribonuclease P RNA component H1
21. gsx2 ENSDARG00000043322, ENSDARG00000116417 329 1.711 1.000 - - - 0.711 - - - - GS homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-041001-114]
22. fabp11b ENSDARG00000002311 354 1.709 - - - - 0.923 - - - 0.786 fatty acid binding protein 11b [Source:ZFIN;Acc:ZDB-GENE-050522-391]
23. mos ENSDARG00000069744, ENSDARG00000110060, ENSDARG00000110181 11 1.703 - 1.000 - - 0.703 - - - - v-mos Moloney murine sarcoma viral oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-040428-3]
24. slco1c1 ENSDARG00000016749 30 1.7 0.838 0.862 - - - - - - - solute carrier organic anion transporter family, member 1C1 [Source:ZFIN;Acc:ZDB-GENE-041210-50]
25. gabrd ENSDARG00000059763 52 1.646 - 0.840 - - - 0.806 - - - gamma-aminobutyric acid (GABA) A receptor, delta [Source:ZFIN;Acc:ZDB-GENE-081105-170]
26. CHD6 ENSDARG00000017244 219 1.635 0.791 - - - - 0.844 - - - chromodomain helicase DNA binding protein 6 [Source:ZFIN;Acc:ZDB-GENE-130530-559]
27. crygn2 ENSDARG00000030411 2551 1.632 0.913 - - - 0.719 - - - - crystallin, gamma N2 [Source:ZFIN;Acc:ZDB-GENE-040801-16]
28. slc7a10b ENSDARG00000051730 44 1.615 - - 0.771 - - 0.844 - - - solute carrier family 7 (neutral amino acid transporter light chain, asc system), member 10b [Source:ZFIN;Acc:ZDB-GENE-121105-2]
29. dscamb ENSDARG00000028118 82 1.597 - 0.856 - - - 0.741 - - - Down syndrome cell adhesion molecule b [Source:ZFIN;Acc:ZDB-GENE-031118-67]
30. klhl24 klhl24 40 1.595 - 0.834 - - 0.761 - - - -
31. polm ENSDARG00000103470 49 1.593 0.720 0.873 - - - - - - - polymerase (DNA directed), mu [Source:ZFIN;Acc:ZDB-GENE-040426-911]
32. me2_1 ENSDARG00000100718, ENSDARG00000114435 52 1.556 0.723 0.833 - - - - - - - malic enzyme 2, NAD(+)-dependent, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040801-147]
33. prdm1b ENSDARG00000098925 440 1.554 - 0.761 - - - - - - 0.793 PR domain containing 1b, with ZNF domain [Source:ZFIN;Acc:ZDB-GENE-080618-2]
34. pmelb ENSDARG00000033760 206 1.554 - - - - 0.838 - - - 0.716 premelanosome protein b [Source:ZFIN;Acc:ZDB-GENE-050912-2]
35. c1ql3b_1 ENSDARG00000028521, ENSDARG00000036483 16 1.554 - 0.851 - - 0.703 - - - - complement component 1, q subcomponent-like 3b [Source:ZFIN;Acc:ZDB-GENE-040426-1836]
36. cdkl5 ENSDARG00000015240 68 1.542 - 0.764 - - - 0.778 - - - cyclin-dependent kinase-like 5 [Source:ZFIN;Acc:ZDB-GENE-081022-110]
37. npb ENSDARG00000078828 230 1.537 0.740 - - - - - - - 0.797 neuropeptide B [Source:ZFIN;Acc:ZDB-GENE-040107-40]
38. APOLD1_1 APOLD1_1 590 1.511 0.705 0.806 - - - - - - -
39. hmx1 ENSDARG00000095651, ENSDARG00000109725, ENSDARG00000111765 151 1.494 - - - - 0.783 - - - 0.711 H6 family homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-080204-54]
40. cib2 ENSDARG00000102820 296 1.477 0.714 - - - - 0.763 - - - calcium and integrin binding family member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1663]
41. aaas ENSDARG00000102274 1192 1.471 0.720 0.751 - - - - - - - achalasia, adrenocortical insufficiency, alacrimia [Source:ZFIN;Acc:ZDB-GENE-030912-4]
42. C13H2orf50 C13H2orf50 87 1.458 - 0.726 - - - 0.732 - - -
43. dct ENSDARG00000006008 2466 1.436 0.713 0.723 - - - - - - - dopachrome tautomerase [Source:ZFIN;Acc:ZDB-GENE-000508-1]
44. pcdh18a ENSDARG00000089805 1096 1.43 0.722 - - - - 0.708 - - - protocadherin 18a [Source:ZFIN;Acc:ZDB-GENE-000607-1]
45. aox3 aox3 399 1.404 0.702 0.702 - - - - - - -
46. CABZ01044346.1 CABZ01044346.1 12 1 1.000 - - - - - - - -
47. BX005364.1 ENSDARG00000092439 1 1 - 1.000 - - - - - - -
48. MLLT4 MLLT4 67 1 1.000 - - - - - - - -
49. si:dkey-25i10.3 si:dkey-25i10.3 5 1 - 1.000 - - - - - - -
50. si:ch211-219a15.3 ENSDARG00000087659 12 1 - 1.000 - - - - - - - si:ch211-219a15.3 [Source:ZFIN;Acc:ZDB-GENE-060503-214]
51. p2rx3a ENSDARG00000010477, ENSDARG00000115270 6 1 1.000 - - - - - - - - purinergic receptor P2X, ligand-gated ion channel, 3a [Source:ZFIN;Acc:ZDB-GENE-000427-3]
52. si:dkey-34e4.1 ENSDARG00000022085 5 1 1.000 - - - - - - - - si:dkey-34e4.1 [Source:ZFIN;Acc:ZDB-GENE-070705-456]
53. MPPED1 ENSDARG00000088181 117 1 1.000 - - - - - - - - metallophosphoesterase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-111104-1]
54. tecrl2 tecrl2 11 1 1.000 - - - - - - - -
55. bcan ENSDARG00000099412 18 1 - - - - - 1.000 - - - brevican [Source:ZFIN;Acc:ZDB-GENE-030131-6045]
56. si:ch73-103b2.1 ENSDARG00000095944, ENSDARG00000099867 40 1 1.000 - - - - - - - - si:ch73-103b2.1 [Source:ZFIN;Acc:ZDB-GENE-110408-42]
57. rad9a ENSDARG00000056984, ENSDARG00000115514 152 1 - 1.000 - - - - - - - RAD9 checkpoint clamp component A [Source:ZFIN;Acc:ZDB-GENE-040426-935]
58. KSR1 KSR1 8 1 - 1.000 - - - - - - -
59. cacna2d2 cacna2d2 16 1 - 1.000 - - - - - - -
60. me1 ENSDARG00000053215 107 1 1.000 - - - - - - - - malic enzyme 1, NADP(+)-dependent, cytosolic [Source:ZFIN;Acc:ZDB-GENE-061013-438]
61. si:dkey-165i8.5 si:dkey-165i8.5 21 1 - 1.000 - - - - - - -
62. zgc:173737 ENSDARG00000058299 6 1 - 1.000 - - - - - - - zgc:173737 [Source:ZFIN;Acc:ZDB-GENE-071004-109]
63. ZNF337_21 ZNF337_21 53 1 - - - - - 1.000 - - -
64. CABZ01066717.2 CABZ01066717.2 10 1 1.000 - - - - - - - -
65. cntn5 ENSDARG00000021584 30 1 1.000 - - - - - - - - contactin 5 [Source:ZFIN;Acc:ZDB-GENE-030131-5640]
66. elfn2 elfn2 1 1 1.000 - - - - - - - -
67. CECR6 25 1 1.000 - - - - - - - - cat eye syndrome chromosome region, candidate 6
68. pak1_1 ENSDARG00000103959 28 1 1.000 - - - - - - - - p21 protein (Cdc42/Rac)-activated kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030826-29]
69. dapk3 ENSDARG00000074447 12 1 1.000 - - - - - - - - death-associated protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3026]
70. gabrb2 ENSDARG00000079586 33 1 1.000 - - - - - - - - gamma-aminobutyric acid (GABA) A receptor, beta 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8196]
71. cyp46a2 cyp46a2 38 1 - 1.000 - - - - - - -
72. C6H21orf58 C6H21orf58 14 1 - 1.000 - - - - - - -
73. c6ast1 ENSDARG00000069216 8 1 1.000 - - - - - - - - six-cysteine containing astacin protease 1 [Source:ZFIN;Acc:ZDB-GENE-070621-1]
74. mlycd ENSDARG00000104732, ENSDARG00000117073 5 1 - 1.000 - - - - - - - malonyl-CoA decarboxylase [Source:ZFIN;Acc:ZDB-GENE-070410-120]
75. dand5 ENSDARG00000036471 8 1 1.000 - - - - - - - - DAN domain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-040421-2]
76. bckdhb ENSDARG00000014676 17 1 1.000 - - - - - - - - branched chain keto acid dehydrogenase E1, beta polypeptide [Source:ZFIN;Acc:ZDB-GENE-030124-2]
77. fam19a5 fam19a5 8 1 1.000 - - - - - - - -
78. CU694319.1 CU694319.1 72 1 1.000 - - - - - - - -
79. si:dkey-60a16.4 si:dkey-60a16.4 14 1 1.000 - - - - - - - -
80. FP017295.1 ENSDARG00000091185 22 1 1.000 - - - - - - - -
81. BX470254.1_1 ENSDARG00000097402 50 1 1.000 - - - - - - - -
82. si:ch211-113a14.19_3 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 31 1 - 1.000 - - - - - - - si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
83. CIR1 ENSDARG00000099733 66 1 1.000 - - - - - - - - corepressor interacting with RBPJ, 1 [Source:HGNC Symbol;Acc:HGNC:24217]
84. si:ch211-15j1.1 ENSDARG00000093177 1 1 1.000 - - - - - - - - si:ch211-15j1.1 [Source:ZFIN;Acc:ZDB-GENE-081031-25]
85. KCNAB1 KCNAB1 918 1 1.000 - - - - - - - -
86. zgc:173713 17 1 - - - - - 1.000 - - - zgc:173713, transcript variant X2
87. mamdc2b ENSDARG00000073695 26 1 1.000 - - - - - - - - MAM domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-091117-16]
88. xrcc3 ENSDARG00000017928, ENSDARG00000113239 90 1 - 1.000 - - - - - - - X-ray repair complementing defective repair in Chinese hamster cells 3 [Source:ZFIN;Acc:ZDB-GENE-050320-116]
89. mrc1b ENSDARG00000038822 73 1 - 1.000 - - - - - - - mannose receptor, C type 1b [Source:ZFIN;Acc:ZDB-GENE-070705-13]
90. slc5a2 ENSDARG00000100919 47 1 1.000 - - - - - - - - solute carrier family 5 (sodium/glucose cotransporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2498]
91. ftr14l ENSDARG00000078254 2 1 1.000 - - - - - - - - finTRIM family, member 14-like [Source:ZFIN;Acc:ZDB-GENE-090312-123]
92. paqr7a ENSDARG00000100462 15 1 1.000 - - - - - - - - progestin and adipoQ receptor family member VII, a [Source:ZFIN;Acc:ZDB-GENE-070705-346]
93. mcf2lb ENSDARG00000076480 50 1 - 1.000 - - - - - - - mcf.2 cell line derived transforming sequence-like b [Source:ZFIN;Acc:ZDB-GENE-081104-416]
94. si:dkeyp-35e5.11 si:dkeyp-35e5.11 38 1 - 1.000 - - - - - - -
95. atxn1b ENSDARG00000060862 345 1 1.000 - - - - - - - - ataxin 1b [Source:ZFIN;Acc:ZDB-GENE-061218-2]
96. si:dkey-222f2.6 si:dkey-222f2.6 1 1 - 1.000 - - - - - - -
97. CABZ01070007.1 CABZ01070007.1 5 1 1.000 - - - - - - - -
98. si:dkey-2j6.2 si:dkey-2j6.2 5 1 - 1.000 - - - - - - -
99. si:ch211-253p18.2 ENSDARG00000092770 21 1 - 1.000 - - - - - - - si:ch211-253p18.2 [Source:ZFIN;Acc:ZDB-GENE-041001-106]
100. si:dkey-182g1.5 si:dkey-182g1.5 22 1 - - - - - 1.000 - - -

There are 976 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA