Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for trpm1a

Gene Name Gene ID Reads Annotation
trpm1a ENSDARG00000011259, ENSDARG00000111200, ENSDARG00000112747 48 transient receptor potential cation channel, subfamily M, member 1a [Source:ZFIN;Acc:ZDB-GENE-070112-1372]










Genes with expression patterns similar to trpm1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. trpm1a ENSDARG00000011259, ENSDARG00000111200, ENSDARG00000112747 48 8 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 transient receptor potential cation channel, subfamily M, member 1a [Source:ZFIN;Acc:ZDB-GENE-070112-1372]
2. ahr1b ENSDARG00000023537 44 2.412 - 0.851 - - 0.825 - - - 0.736 aryl hydrocarbon receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050922-1]
3. hmx4 ENSDARG00000007941, ENSDARG00000115000, ENSDARG00000116208 447 2.389 0.839 - - - 0.706 0.844 - - - H6 family homeobox 4 [Source:ZFIN;Acc:ZDB-GENE-060825-142]
4. cyp2aa2 ENSDARG00000104811 77 2 1.000 1.000 - - - - - - - y cytochrome P450, family 2, subfamily AA, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-061027-232]
5. si:ch73-155e10.1 si:ch73-155e10.1 13 1.922 1.000 0.922 - - - - - - -
6. SERINC4 ENSDARG00000044815 45 1.887 1.000 - - - - - - - 0.887 serine incorporator 4 [Source:ZFIN;Acc:ZDB-GENE-121031-1]
7. si:dkey-238f9.1 ENSDARG00000079446 51 1.871 0.871 1.000 - - - - - - - si:dkey-238f9.1 [Source:ZFIN;Acc:ZDB-GENE-091204-297]
8. pcgf5b ENSDARG00000052388 163 1.871 0.871 1.000 - - - - - - - polycomb group ring finger 5b [Source:ZFIN;Acc:ZDB-GENE-060512-34]
9. zgc:162144 ENSDARG00000037603, ENSDARG00000109982 11 1.871 0.871 1.000 - - - - - - - zgc:162144 [Source:ZFIN;Acc:ZDB-GENE-030131-7630]
10. EPHB1 ENSDARG00000076757 20 1.844 1.000 - - - - 0.844 - - - EPH receptor B1 [Source:ZFIN;Acc:ZDB-GENE-070912-219]
11. si:ch211-110p13.9 ENSDARG00000093821 82 1.823 0.823 1.000 - - - - - - - si:ch211-110p13.9 [Source:ZFIN;Acc:ZDB-GENE-060526-9]
12. ANKRD13D ENSDARG00000098140 88 1.763 0.823 - - - - 0.940 - - - ankyrin repeat domain 13 family, member D [Source:ZFIN;Acc:ZDB-GENE-101007-3]
13. barhl2 ENSDARG00000104361, ENSDARG00000114681, ENSDARG00000115723 2000 1.755 - 0.934 - - 0.821 - - - - BarH-like homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-050913-153]
14. vsx1 ENSDARG00000056292, ENSDARG00000109766 442 1.75 - - - - - 1.000 - - 0.750 visual system homeobox 1 homolog, chx10-like [Source:ZFIN;Acc:ZDB-GENE-990415-205]
15. foxf2b ENSDARG00000070389 67 1.746 - 1.000 - - 0.746 - - - - forkhead box F2b [Source:ZFIN;Acc:ZDB-GENE-041001-130]
16. htr1ab ENSDARG00000057098, ENSDARG00000113207 92 1.738 0.865 0.873 - - - - - - - 5-hydroxytryptamine (serotonin) receptor 1A b [Source:ZFIN;Acc:ZDB-GENE-090409-2]
17. si:ch211-191a6.3 si:ch211-191a6.3 6 1.736 1.000 - - - 0.736 - - - -
18. PGBD4_4 PGBD4_4 15 1.715 0.871 - - - - 0.844 - - -
19. C25H15orf27 C25H15orf27 69 1.713 0.713 - - - - 1.000 - - -
20. rpph1 33 1.713 0.954 0.759 - - - - - - - ribonuclease P RNA component H1
21. gsx2 ENSDARG00000043322, ENSDARG00000116417 329 1.711 1.000 - - - 0.711 - - - - GS homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-041001-114]
22. fabp11b ENSDARG00000002311 354 1.709 - - - - 0.923 - - - 0.786 fatty acid binding protein 11b [Source:ZFIN;Acc:ZDB-GENE-050522-391]
23. mos ENSDARG00000069744, ENSDARG00000110060, ENSDARG00000110181 11 1.703 - 1.000 - - 0.703 - - - - v-mos Moloney murine sarcoma viral oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-040428-3]
24. slco1c1 ENSDARG00000016749 30 1.7 0.838 0.862 - - - - - - - solute carrier organic anion transporter family, member 1C1 [Source:ZFIN;Acc:ZDB-GENE-041210-50]
25. gabrd ENSDARG00000059763 52 1.646 - 0.840 - - - 0.806 - - - gamma-aminobutyric acid (GABA) A receptor, delta [Source:ZFIN;Acc:ZDB-GENE-081105-170]
26. CHD6 ENSDARG00000017244 219 1.635 0.791 - - - - 0.844 - - - chromodomain helicase DNA binding protein 6 [Source:ZFIN;Acc:ZDB-GENE-130530-559]
27. crygn2 ENSDARG00000030411 2551 1.632 0.913 - - - 0.719 - - - - crystallin, gamma N2 [Source:ZFIN;Acc:ZDB-GENE-040801-16]
28. slc7a10b ENSDARG00000051730 44 1.615 - - 0.771 - - 0.844 - - - solute carrier family 7 (neutral amino acid transporter light chain, asc system), member 10b [Source:ZFIN;Acc:ZDB-GENE-121105-2]
29. dscamb ENSDARG00000028118 82 1.597 - 0.856 - - - 0.741 - - - Down syndrome cell adhesion molecule b [Source:ZFIN;Acc:ZDB-GENE-031118-67]
30. klhl24 klhl24 40 1.595 - 0.834 - - 0.761 - - - -
31. polm ENSDARG00000103470 49 1.593 0.720 0.873 - - - - - - - polymerase (DNA directed), mu [Source:ZFIN;Acc:ZDB-GENE-040426-911]
32. me2_1 ENSDARG00000100718, ENSDARG00000114435 52 1.556 0.723 0.833 - - - - - - - malic enzyme 2, NAD(+)-dependent, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040801-147]
33. prdm1b ENSDARG00000098925 440 1.554 - 0.761 - - - - - - 0.793 PR domain containing 1b, with ZNF domain [Source:ZFIN;Acc:ZDB-GENE-080618-2]
34. pmelb ENSDARG00000033760 206 1.554 - - - - 0.838 - - - 0.716 premelanosome protein b [Source:ZFIN;Acc:ZDB-GENE-050912-2]
35. c1ql3b_1 ENSDARG00000028521, ENSDARG00000036483 16 1.554 - 0.851 - - 0.703 - - - - complement component 1, q subcomponent-like 3b [Source:ZFIN;Acc:ZDB-GENE-040426-1836]
36. cdkl5 ENSDARG00000015240 68 1.542 - 0.764 - - - 0.778 - - - cyclin-dependent kinase-like 5 [Source:ZFIN;Acc:ZDB-GENE-081022-110]
37. npb ENSDARG00000078828 230 1.537 0.740 - - - - - - - 0.797 neuropeptide B [Source:ZFIN;Acc:ZDB-GENE-040107-40]
38. APOLD1_1 APOLD1_1 590 1.511 0.705 0.806 - - - - - - -
39. hmx1 ENSDARG00000095651, ENSDARG00000109725, ENSDARG00000111765 151 1.494 - - - - 0.783 - - - 0.711 H6 family homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-080204-54]
40. cib2 ENSDARG00000102820 296 1.477 0.714 - - - - 0.763 - - - calcium and integrin binding family member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1663]
41. aaas ENSDARG00000102274 1192 1.471 0.720 0.751 - - - - - - - achalasia, adrenocortical insufficiency, alacrimia [Source:ZFIN;Acc:ZDB-GENE-030912-4]
42. C13H2orf50 C13H2orf50 87 1.458 - 0.726 - - - 0.732 - - -
43. dct ENSDARG00000006008 2466 1.436 0.713 0.723 - - - - - - - dopachrome tautomerase [Source:ZFIN;Acc:ZDB-GENE-000508-1]
44. pcdh18a ENSDARG00000089805 1096 1.43 0.722 - - - - 0.708 - - - protocadherin 18a [Source:ZFIN;Acc:ZDB-GENE-000607-1]
45. aox3 aox3 399 1.404 0.702 0.702 - - - - - - -
46. si:ch1073-296i8.2 ENSDARG00000093773 36 1 1.000 - - - - - - - - si:ch1073-296i8.2 [Source:ZFIN;Acc:ZDB-GENE-110411-9]
47. TXNRD2 TXNRD2 14 1 - 1.000 - - - - - - -
48. znf106b ENSDARG00000091947 108 1 1.000 - - - - - - - - zinc finger protein 106b [Source:ZFIN;Acc:ZDB-GENE-091118-24]
49. itgbl1 ENSDARG00000040985 705 1 - 1.000 - - - - - - - integrin, beta-like 1 [Source:ZFIN;Acc:ZDB-GENE-050522-410]
50. si:dkey-247i3.6 ENSDARG00000092139, ENSDARG00000094308, ENSDARG00000100214 22 1 - 1.000 - - - - - - - si:dkey-247i3.6 [Source:ZFIN;Acc:ZDB-GENE-110913-83]
51. KLHL35 ENSDARG00000063577 77 1 1.000 - - - - - - - - kelch-like family member 35 [Source:ZFIN;Acc:ZDB-GENE-091118-66]
52. BX571712.3 ENSDARG00000098050 1 1 - 1.000 - - - - - - - si:dkeyp-9a1.2 [Source:NCBI gene;Acc:103909046]
53. shox2 ENSDARG00000075713 104 1 1.000 - - - - - - - - short stature homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1457]
54. si:ch211-132b12.7 ENSDARG00000068374 30 1 1.000 - - - - - - - - si:ch211-132b12.7 [Source:ZFIN;Acc:ZDB-GENE-050419-250]
55. MPPED1 ENSDARG00000088181 117 1 1.000 - - - - - - - - metallophosphoesterase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-111104-1]
56. AL928852.1 AL928852.1 23 1 - 1.000 - - - - - - -
57. UNC13C 119 1 - 1.000 - - - - - - - unc-13 homolog C (C. elegans)
58. ca4b ENSDARG00000042293 5 1 1.000 - - - - - - - - carbonic anhydrase IV b [Source:ZFIN;Acc:ZDB-GENE-080815-5]
59. ZNF337_21 ZNF337_21 53 1 - - - - - 1.000 - - -
60. sult4a1 ENSDARG00000101967 205 1 1.000 - - - - - - - - sulfotransferase family 4A, member 1 [Source:ZFIN;Acc:ZDB-GENE-060421-2705]
61. paqr7a ENSDARG00000100462 15 1 1.000 - - - - - - - - progestin and adipoQ receptor family member VII, a [Source:ZFIN;Acc:ZDB-GENE-070705-346]
62. ptf1a ENSDARG00000014479 349 1 1.000 - - - - - - - - pancreas associated transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030616-579]
63. cdadc1 ENSDARG00000036650 16 1 - - - - - 1.000 - - - cytidine and dCMP deaminase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041114-163]
64. si:ch211-64i20.3 ENSDARG00000089934, ENSDARG00000105063 42 1 - - - - - 1.000 - - - si:ch211-64i20.3 [Source:ZFIN;Acc:ZDB-GENE-110913-55]
65. SNORA7 SNORA7 100 1 - 1.000 - - - - - - -
66. usp47 ENSDARG00000102645 16 1 1.000 - - - - - - - - ubiquitin specific peptidase 47 [Source:ZFIN;Acc:ZDB-GENE-070719-7]
67. CABZ01064968.2 CABZ01064968.2 20 1 1.000 - - - - - - - -
68. APCDD1 ENSDARG00000098203 10 1 1.000 - - - - - - - - APC down-regulated 1 [Source:HGNC Symbol;Acc:HGNC:15718]
69. htra1b ENSDARG00000014907 146 1 1.000 - - - - - - - - HtrA serine peptidase 1b [Source:ZFIN;Acc:ZDB-GENE-080219-7]
70. si:dkey-250k10.3 si:dkey-250k10.3 2 1 - 1.000 - - - - - - -
71. tlr7 ENSDARG00000068812, ENSDARG00000075685 30 1 - 1.000 - - - - - - - toll-like receptor 7 [Source:ZFIN;Acc:ZDB-GENE-040219-11]
72. atxn1b ENSDARG00000060862 345 1 1.000 - - - - - - - - ataxin 1b [Source:ZFIN;Acc:ZDB-GENE-061218-2]
73. CU179643.1 ENSDARG00000086489 25 1 - 1.000 - - - - - - -
74. DSEL DSEL 1 1 1.000 - - - - - - - -
75. bcan ENSDARG00000099412 18 1 - - - - - 1.000 - - - brevican [Source:ZFIN;Acc:ZDB-GENE-030131-6045]
76. SLC13A5 SLC13A5 31 1 - 1.000 - - - - - - -
77. si:ch211-67f13.8 ENSDARG00000079155 7 1 - 1.000 - - - - - - - si:ch211-67f13.8 [Source:ZFIN;Acc:ZDB-GENE-090312-114]
78. BX928744.1 BX928744.1 15 1 1.000 - - - - - - - -
79. lratb 3 1 - 1.000 - - - - - - - lecithin retinol acyltransferase b (phosphatidylcholine-retinol O-acyltransferase), transcript variant X2
80. BX000999.2 BX000999.2 2353 1 1.000 - - - - - - - -
81. si:dkey-206f10.1 ENSDARG00000032838 18 1 - 1.000 - - - - - - - si:dkey-206f10.1 [Source:ZFIN;Acc:ZDB-GENE-041014-154]
82. FGFBP3 FGFBP3 993 1 1.000 - - - - - - - -
83. si:ch211-57m13.1 ENSDARG00000095927 1 1 - 1.000 - - - - - - - si:ch211-57m13.1 [Source:ZFIN;Acc:ZDB-GENE-090312-43]
84. HIST1H2BA ENSDARG00000116654 10 1 1.000 - - - - - - - - histone cluster 1 H2B family member a [Source:HGNC Symbol;Acc:HGNC:18730]
85. TENM2_1 ENSDARG00000037122 67 1 - 1.000 - - - - - - - teneurin transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:29943]
86. tecrl2 tecrl2 11 1 1.000 - - - - - - - -
87. zgc:163077 ENSDARG00000101593 60 1 1.000 - - - - - - - - zgc:163077 [Source:ZFIN;Acc:ZDB-GENE-070521-6]
88. crhbp ENSDARG00000024831 63 1 - 1.000 - - - - - - - corticotropin releasing hormone binding protein [Source:ZFIN;Acc:ZDB-GENE-040801-196]
89. GPR22_1 GPR22_1 28 1 1.000 - - - - - - - -
90. AL929580.1 AL929580.1 1 1 - 1.000 - - - - - - -
91. CABZ01048675.1 CABZ01048675.1 4 1 - 1.000 - - - - - - -
92. BX005364.1 ENSDARG00000092439 1 1 - 1.000 - - - - - - -
93. si:dkey-179k24.3 si:dkey-179k24.3 3 1 1.000 - - - - - - - -
94. si:dkey-34e4.1 ENSDARG00000022085 5 1 1.000 - - - - - - - - si:dkey-34e4.1 [Source:ZFIN;Acc:ZDB-GENE-070705-456]
95. CABZ01081294.1 CABZ01081294.1 1 1 1.000 - - - - - - - -
96. RBBP6_1 RBBP6_1 1 1 - 1.000 - - - - - - -
97. PTGR1 ENSDARG00000024877, ENSDARG00000115676 6 1 - 1.000 - - - - - - - prostaglandin reductase 1 [Source:ZFIN;Acc:ZDB-GENE-041212-80]
98. disp2 ENSDARG00000042846 53 1 - 1.000 - - - - - - - dispatched homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030915-1]
99. rgs8 ENSDARG00000070037, ENSDARG00000111478 37 1 1.000 - - - - - - - - regulator of G protein signaling 8 [Source:ZFIN;Acc:ZDB-GENE-040718-264]
100. irf3 ENSDARG00000076251 8 1 - 1.000 - - - - - - - interferon regulatory factor 3 [Source:ZFIN;Acc:ZDB-GENE-071120-7]

There are 976 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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