Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for trpc5b

Gene Name Gene ID Reads Annotation
trpc5b ENSDARG00000060837, ENSDARG00000114021 15 transient receptor potential cation channel, subfamily C, member 5b [Source:ZFIN;Acc:ZDB-GENE-091112-24]










Genes with expression patterns similar to trpc5b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. trpc5b ENSDARG00000060837, ENSDARG00000114021 15 6 - 1.000 1.000 - 1.000 - 1.000 1.000 1.000 transient receptor potential cation channel, subfamily C, member 5b [Source:ZFIN;Acc:ZDB-GENE-091112-24]
2. si:ch211-207c7.6 si:ch211-207c7.6 23 2.61 - 0.903 0.902 - - - - - 0.805
3. zgc:114123 ENSDARG00000044956 9 1.978 - 0.986 - - - - 0.992 - - zgc:114123 [Source:ZFIN;Acc:ZDB-GENE-050913-53]
4. ube2l3b ENSDARG00000027141 26 1.947 - 1.000 0.947 - - - - - - ubiquitin-conjugating enzyme E2L 3b [Source:ZFIN;Acc:ZDB-GENE-030131-662]
5. slc27a6 ENSDARG00000046053 57 1.926 - 0.972 - - - - 0.954 - - solute carrier family 27 (fatty acid transporter), member 6 [Source:ZFIN;Acc:ZDB-GENE-060825-27]
6. TBC1D17 ENSDARG00000005927 163 1.898 - 0.982 - - - - 0.916 - - TBC1 domain family, member 17 [Source:ZFIN;Acc:ZDB-GENE-050522-79]
7. wisp1a ENSDARG00000054331 26 1.896 - - 0.904 - - - 0.992 - - WNT1 inducible signaling pathway protein 1a [Source:ZFIN;Acc:ZDB-GENE-070705-178]
8. plek ENSDARG00000104325 21 1.844 - - 0.860 - - - 0.984 - - pleckstrin [Source:ZFIN;Acc:ZDB-GENE-040426-1506]
9. NFAT5 NFAT5 62 1.836 - 0.958 0.878 - - - - - -
10. cx28.8 ENSDARG00000071042 62 1.835 - 0.947 - - - - 0.888 - - connexin 28.8 [Source:ZFIN;Acc:ZDB-GENE-050616-1]
11. si:ch73-103l1.2 ENSDARG00000096505 17 1.793 - - - - - - 0.992 0.801 - si:ch73-103l1.2 [Source:ZFIN;Acc:ZDB-GENE-121214-226]
12. arsg ENSDARG00000101715 57 1.789 - 0.934 - - - - 0.855 - - arylsulfatase G [Source:ZFIN;Acc:ZDB-GENE-060503-154]
13. sh2d3cb ENSDARG00000104555, ENSDARG00000116530 21 1.771 - - 1.000 - - - - - 0.771 SH2 domain containing 3Cb [Source:ZFIN;Acc:ZDB-GENE-040426-1052]
14. si:ch211-255g12.7 si:ch211-255g12.7 44 1.756 - - 0.791 - - - 0.965 - -
15. BICD1 BICD1 9 1.74 - - 0.866 - - - - - 0.874
16. crygn2 ENSDARG00000030411 2551 1.735 - 0.959 - - - - 0.776 - - crystallin, gamma N2 [Source:ZFIN;Acc:ZDB-GENE-040801-16]
17. slco2a1 ENSDARG00000061896 58 1.732 - 0.934 - - 0.798 - - - - solute carrier organic anion transporter family, member 2A1 [Source:ZFIN;Acc:ZDB-GENE-060606-3]
18. syt9b ENSDARG00000029239 31 1.731 - - 0.766 - - - 0.965 - - synaptotagmin IXb [Source:ZFIN;Acc:ZDB-GENE-040822-6]
19. cdc40 ENSDARG00000041226 514 1.71 - 0.820 - - - - 0.890 - - cell division cycle 40 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050116-3]
20. slc6a13 369 1.71 - 0.825 - - - - 0.885 - - solute carrier family 6 (neurotransmitter transporter), member 13, transcript variant X1
21. napgl napgl 39 1.697 - - - - 0.740 - 0.957 - -
22. CABZ01066717.2 CABZ01066717.2 10 1.696 - - - - 0.996 - - - 0.700
23. si:dkey-16p6.1_1 ENSDARG00000088245, ENSDARG00000089179, ENSDARG00000090033, ENSDARG00000090192, ENSDARG00000090734, ENSDARG00000091746, ENSDARG00000098189, ENSDARG00000098515, ENSDARG00000099262, ENSDARG00000100061, ENSDARG00000100164, ENSDARG00000101351, ENSDARG00000101689, ENSDARG00000101828, ENSDARG00000102212, ENSDARG00000104416, ENSDARG00000104897, ENSDARG00000105266, ENSDARG00000111518 37 1.689 - - - - 0.872 - 0.817 - - si:dkey-16p6.1 [Source:ZFIN;Acc:ZDB-GENE-081103-43]
24. CR931813.1 ENSDARG00000103293 84 1.667 - 0.845 - - - - 0.822 - -
25. znf653 ENSDARG00000093469 149 1.648 - 0.745 - - - - 0.903 - - zinc finger protein 653 [Source:ZFIN;Acc:ZDB-GENE-071116-3]
26. HIST1H2BA ENSDARG00000116654 10 1.613 - - - - - - - 0.801 0.812 histone cluster 1 H2B family member a [Source:HGNC Symbol;Acc:HGNC:18730]
27. si:ch211-139n6.3 ENSDARG00000093230 147 1.613 - 0.758 0.855 - - - - - - si:ch211-139n6.3 [Source:ZFIN;Acc:ZDB-GENE-041111-114]
28. bsnd ENSDARG00000086265 178 1.574 - 0.840 - - 0.734 - - - - barttin CLCNK-type chloride channel accessory beta subunit [Source:ZFIN;Acc:ZDB-GENE-070705-548]
29. tmigd1 ENSDARG00000007040 19 1.527 - - - - - - 0.708 - 0.819 transmembrane and immunoglobulin domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-080303-6]
30. alg14 ENSDARG00000103093, ENSDARG00000114160, ENSDARG00000116808 95 1.471 - 0.722 - - - - 0.749 - - ALG14, UDP-N-acetylglucosaminyltransferase subunit [Source:ZFIN;Acc:ZDB-GENE-041010-195]
31. PITPNM2 ENSDARG00000111528 2 1 - - - - 1.000 - - - - phosphatidylinositol transfer protein membrane associated 2 [Source:HGNC Symbol;Acc:HGNC:21044]
32. Metazoa_SRP_20 Metazoa_SRP_20 2 1 - - 1.000 - - - - - -
33. crebl2 ENSDARG00000104049 16 1 - - 1.000 - - - - - - cAMP responsive element binding protein-like 2 [Source:ZFIN;Acc:ZDB-GENE-040718-456]
34. ZNF384 ZNF384 3 1 - - - - 1.000 - - - -
35. tph1b ENSDARG00000036082, ENSDARG00000112888 79 1 - 1.000 - - - - - - - tryptophan hydroxylase 1b [Source:ZFIN;Acc:ZDB-GENE-030805-6]
36. MYOM2 MYOM2 6 1 - - - - 1.000 - - - -
37. BX004980.1 ENSDARG00000099680 10 1 - - - - - - - 1.000 -
38. kirrel3a ENSDARG00000075806 36 1 - 1.000 - - - - - - - kirre like nephrin family adhesion molecule 3a [Source:ZFIN;Acc:ZDB-GENE-091117-44]
39. CABZ01023255.1 ENSDARG00000099984 13 1 - - 1.000 - - - - - - NACHT, LRR and PYD domains-containing protein 12-like [Source:NCBI gene;Acc:110438218]
40. si:ch73-189n23.1 ENSDARG00000086247 15 1 - - 1.000 - - - - - - si:ch73-189n23.1 [Source:ZFIN;Acc:ZDB-GENE-070705-217]
41. g6pcb ENSDARG00000014967 8 1 - - - - 1.000 - - - - glucose-6-phosphatase b, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-081223-2]
42. clcn2 clcn2 13 1 - - 1.000 - - - - - -
43. slc25a29 ENSDARG00000057352 9 1 - - 1.000 - - - - - - solute carrier family 25 (mitochondrial carnitine/acylcarnitine carrier), member 29 [Source:ZFIN;Acc:ZDB-GENE-050913-70]
44. si:dkey-20i20.12 si:dkey-20i20.12 7 1 - - - - 1.000 - - - -
45. ptgdsb.2 ENSDARG00000071626 105 1 - 1.000 - - - - - - - prostaglandin D2 synthase b, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-030911-3]
46. vav3b ENSDARG00000073713, ENSDARG00000075962 26 1 - - 1.000 - - - - - - vav 3 guanine nucleotide exchange factor b [Source:ZFIN;Acc:ZDB-GENE-070912-251]
47. cyp2k17 ENSDARG00000104529 1 1 - - 1.000 - - - - - - cytochrome P450, family 2, subfamily K, polypeptide17 [Source:ZFIN;Acc:ZDB-GENE-070424-41]
48. si:dkey-45j10.2 si:dkey-45j10.2 5 1 - - 1.000 - - - - - -
49. cd44a ENSDARG00000087863 4 1 - - 1.000 - - - - - - CD44 molecule (Indian blood group) a [Source:ZFIN;Acc:ZDB-GENE-110429-1]
50. si:dkey-150k17.2 si:dkey-150k17.2 40 1 - 1.000 - - - - - - -
51. gata1b ENSDARG00000059130 151 1 - - - - 1.000 - - - - GATA binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-081104-43]
52. fam151a ENSDARG00000058218 40 1 - 1.000 - - - - - - - family with sequence similarity 151, member A [Source:ZFIN;Acc:ZDB-GENE-070705-105]
53. CABZ01081904.1 CABZ01081904.1 1 1 - - 1.000 - - - - - -
54. si:dkey-85n7.11 si:dkey-85n7.11 2 1 - - 1.000 - - - - - -
55. CARD6 CARD6 2 1 - - - - 1.000 - - - -
56. BX569789.2 BX569789.2 12 1 - - 1.000 - - - - - -
57. lzts2b ENSDARG00000077207 22 1 - - - - 1.000 - - - - leucine zipper, putative tumor suppressor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-9587]
58. trim54 ENSDARG00000029907 10 0.996 - - - - 0.996 - - - - tripartite motif containing 54 [Source:ZFIN;Acc:ZDB-GENE-041014-342]
59. bivm ENSDARG00000061409, ENSDARG00000111376 25 0.996 - 0.996 - - - - - - - basic, immunoglobulin-like variable motif containing [Source:ZFIN;Acc:ZDB-GENE-010822-3]
60. rab42a ENSDARG00000034215 692 0.995 - - - - - - 0.995 - - RAB42, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-040426-1983]
61. pigf ENSDARG00000032780 7 0.994 - - - - 0.994 - - - - phosphatidylinositol glycan anchor biosynthesis, class F [Source:ZFIN;Acc:ZDB-GENE-040426-1801]
62. si:dkey-10o6.2 ENSDARG00000074628 22 0.994 - - - - 0.994 - - - - si:dkey-10o6.2 [Source:ZFIN;Acc:ZDB-GENE-070705-284]
63. slc8a2a ENSDARG00000008912, ENSDARG00000116797 12 0.994 - - 0.994 - - - - - - solute carrier family 8 (sodium/calcium exchanger), member 2a [Source:ZFIN;Acc:ZDB-GENE-060531-155]
64. CDH12_1 CDH12_1 57 0.993 - - - - - - 0.993 - -
65. CABZ01046997.2 CABZ01046997.2 7 0.993 - - - - - - 0.993 - -
66. si:ch211-152l15.4 si:ch211-152l15.4 13 0.992 - - - - - - 0.992 - -
67. zgc:173556 82 0.992 - - - - - - 0.992 - - zgc:173556
68. CABZ01056821.2 CABZ01056821.2 5 0.992 - - 0.992 - - - - - -
69. si:dkey-27p18.3 ENSDARG00000092228 38 0.992 - - - - - - 0.992 - - si:dkey-27p18.3 [Source:ZFIN;Acc:ZDB-GENE-060526-287]
70. CR391998.1 ENSDARG00000091817 15 0.992 - - - - - - 0.992 - - putative protein TPRXL [Source:NCBI gene;Acc:101882255]
71. si:ch211-145h19.2 7 0.992 - - - - - - 0.992 - - si:ch211-145h19.2
72. fkbp6 ENSDARG00000030133, ENSDARG00000099077 6 0.992 - - - - - - 0.992 - - FK506 binding protein 6 [Source:NCBI gene;Acc:402839]
73. MCOLN3 MCOLN3 4 0.992 - - - - - - 0.992 - -
74. CCDC120 ENSDARG00000032856, ENSDARG00000114382 30 0.992 - - - - - - 0.992 - - coiled-coil domain containing 120 [Source:ZFIN;Acc:ZDB-GENE-061027-93]
75. si:dkey-251i8.2 si:dkey-251i8.2 2 0.992 - - - - - - 0.992 - -
76. si:dkey-47k20.7 ENSDARG00000056014 1 0.992 - - - - - - 0.992 - - si:dkey-47k20.7 [Source:ZFIN;Acc:ZDB-GENE-060503-264]
77. ZNF337_21 ZNF337_21 53 0.992 - - - - - - 0.992 - -
78. cntn5 ENSDARG00000021584 30 0.992 - - - - - - 0.992 - - contactin 5 [Source:ZFIN;Acc:ZDB-GENE-030131-5640]
79. hs3st1l2 ENSDARG00000035578 279 0.992 - 0.992 - - - - - - - heparan sulfate (glucosamine) 3-O-sulfotransferase 1-like 2 [Source:ZFIN;Acc:ZDB-GENE-070202-3]
80. CABZ01044346.1 CABZ01044346.1 12 0.992 - - - - - - 0.992 - -
81. cttn ENSDARG00000011777 19 0.992 - - - - - - 0.992 - - cortactin [Source:ZFIN;Acc:ZDB-GENE-040715-3]
82. si:ch73-67c22.3 si:ch73-67c22.3 30 0.992 - - - - - - 0.992 - -
83. si:dkey-30j22.3 si:dkey-30j22.3 17 0.992 - - - - - - 0.992 - -
84. gfra1a ENSDARG00000099732 33 0.992 - - - - - - 0.992 - - gdnf family receptor alpha 1a [Source:ZFIN;Acc:ZDB-GENE-010226-2]
85. zgc:171452 ENSDARG00000074069 6 0.992 - - - - - - 0.992 - - zgc:171452 [Source:ZFIN;Acc:ZDB-GENE-071004-84]
86. helt ENSDARG00000056400 482 0.992 - - - - - - 0.992 - - helt bHLH transcription factor [Source:ZFIN;Acc:ZDB-GENE-040824-6]
87. zgc:165539 ENSDARG00000027639 20 0.992 - - - - - - 0.992 - - zgc:165539 [Source:ZFIN;Acc:ZDB-GENE-030131-5478]
88. USH1G USH1G 25 0.992 - - - - - - 0.992 - -
89. si:ch73-222f22.2 ENSDARG00000094271, ENSDARG00000095763 18 0.992 - - - - - - 0.992 - - si:ch73-222f22.2 [Source:ZFIN;Acc:ZDB-GENE-100921-20]
90. ugt5c1 ENSDARG00000061444 6 0.992 - - - - - - 0.992 - - UDP glucuronosyltransferase 5 family, polypeptide C1 [Source:ZFIN;Acc:ZDB-GENE-050419-68]
91. DLEU7 DLEU7 91 0.992 - - - - - - 0.992 - -
92. CNGB3 CNGB3 7 0.992 - - - - - - 0.992 - -
93. si:dkey-199m13.1 si:dkey-199m13.1 3 0.992 - - - - - - 0.992 - -
94. BX957353.1 BX957353.1 10 0.992 - - - - - - 0.992 - -
95. ttc7a ENSDARG00000074760 39 0.992 - - - - - - 0.992 - - tetratricopeptide repeat domain 7A [Source:ZFIN;Acc:ZDB-GENE-010319-27]
96. mab21l3 ENSDARG00000076013, ENSDARG00000112160 35 0.992 - - - - - - 0.992 - - mab-21-like 3 [Source:ZFIN;Acc:ZDB-GENE-070912-242]
97. cldn2 ENSDARG00000044387 24 0.992 - - - - - - 0.992 - - claudin 2 [Source:ZFIN;Acc:ZDB-GENE-040912-26]
98. paqr5a ENSDARG00000041145, ENSDARG00000115247 38 0.992 - - - - - - 0.992 - - progestin and adipoQ receptor family member Va [Source:ZFIN;Acc:ZDB-GENE-040426-867]
99. crygm2c ENSDARG00000117097 1 0.992 - - - - - - 0.992 - - crystallin, gamma M2c [Source:ZFIN;Acc:ZDB-GENE-050516-11]
100. CABZ01059415.1 CABZ01059415.1 1 0.992 - - - - - - 0.992 - -

There are 885 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA