Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for trpa1b

Gene Name Gene ID Reads Annotation
trpa1b ENSDARG00000031875 39 transient receptor potential cation channel, subfamily A, member 1b [Source:ZFIN;Acc:ZDB-GENE-050106-1]










Genes with expression patterns similar to trpa1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. trpa1b ENSDARG00000031875 39 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 transient receptor potential cation channel, subfamily A, member 1b [Source:ZFIN;Acc:ZDB-GENE-050106-1]
2. syt9b ENSDARG00000029239 31 1.96 - - - - - 1.000 0.960 - - synaptotagmin IXb [Source:ZFIN;Acc:ZDB-GENE-040822-6]
3. si:dkey-16p6.1_1 ENSDARG00000088245, ENSDARG00000089179, ENSDARG00000090033, ENSDARG00000090192, ENSDARG00000090734, ENSDARG00000091746, ENSDARG00000098189, ENSDARG00000098515, ENSDARG00000099262, ENSDARG00000100061, ENSDARG00000100164, ENSDARG00000101351, ENSDARG00000101689, ENSDARG00000101828, ENSDARG00000102212, ENSDARG00000104416, ENSDARG00000104897, ENSDARG00000105266, ENSDARG00000111518 37 1.913 1.000 - - - - - 0.913 - - si:dkey-16p6.1 [Source:ZFIN;Acc:ZDB-GENE-081103-43]
4. ZNF337_16 ZNF337_16 22 1.865 0.865 - - - - 1.000 - - -
5. si:ch211-254n4.1 si:ch211-254n4.1 36 1.859 - - - - - 0.930 0.929 - -
6. cyp2p6 ENSDARG00000042978 46 1.833 1.000 - - - - - 0.833 - - cytochrome P450, family 2, subfamily P, polypeptide 6 [Source:ZFIN;Acc:ZDB-GENE-040426-790]
7. lrrcc1 ENSDARG00000078535 118 1.798 - - - 0.964 - - 0.834 - - leucine rich repeat and coiled-coil centrosomal protein 1 [Source:ZFIN;Acc:ZDB-GENE-041111-207]
8. si:ch211-128b10.4 si:ch211-128b10.4 3 1.784 - - 0.784 - - 1.000 - - -
9. adra2c ENSDARG00000069669, ENSDARG00000109788, ENSDARG00000110072 61 1.78 - - - - - 0.946 0.834 - - adrenoceptor alpha 2C [Source:ZFIN;Acc:ZDB-GENE-021010-3]
10. CYP27A1 CYP27A1 4 1.775 - - - - - 1.000 - - 0.775
11. CRIP2 ENSDARG00000070670 323 1.769 - 0.942 - - - 0.827 - - - cysteine-rich protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2889]
12. BX927362.1 ENSDARG00000097469 13 1.759 - - - - - 1.000 0.759 - -
13. rpap2 ENSDARG00000038397 118 1.74 - - - 0.863 - 0.877 - - - RNA polymerase II associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-050522-420]
14. INTS4 ENSDARG00000102953 38 1.729 - 1.000 - - - - 0.729 - - integrator complex subunit 4 [Source:ZFIN;Acc:ZDB-GENE-120215-81]
15. npsn ENSDARG00000010423 768 1.728 0.786 0.942 - - - - - - - nephrosin [Source:ZFIN;Acc:ZDB-GENE-040420-2]
16. tmigd1 ENSDARG00000007040 19 1.723 0.775 - - - - - 0.948 - - transmembrane and immunoglobulin domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-080303-6]
17. si:dkeyp-33c10.5 11 1.713 - 0.713 - - - 1.000 - - - si:dkeyp-33c10.5, transcript variant X2
18. zgc:77112 ENSDARG00000015657 24 1.713 - 0.713 - - - 1.000 - - - zgc:77112 [Source:ZFIN;Acc:ZDB-GENE-040426-2219]
19. bcl11ba ENSDARG00000062510 169 1.713 1.000 0.713 - - - - - - - B cell CLL/lymphoma 11Ba [Source:ZFIN;Acc:ZDB-GENE-061207-62]
20. si:dkeyp-67e1.8 si:dkeyp-67e1.8 6 1.713 - 0.713 - - - 1.000 - - -
21. OSBPL1A ENSDARG00000105147 16 1.711 - - - - - 1.000 - 0.711 - oxysterol binding protein-like 1A [Source:ZFIN;Acc:ZDB-GENE-050208-657]
22. klc3 ENSDARG00000055965 116 1.708 - 0.729 - 0.979 - - - - - kinesin light chain 3 [Source:ZFIN;Acc:ZDB-GENE-060929-772]
23. grm2a ENSDARG00000004150 64 1.705 - 0.713 - 0.992 - - - - - glutamate receptor, metabotropic 2a [Source:ZFIN;Acc:ZDB-GENE-030131-8097]
24. phyh ENSDARG00000086740 88 1.701 0.720 - - 0.981 - - - - - phytanoyl-CoA 2-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-050417-361]
25. TDRD7B ENSDARG00000077523 124 1.694 - - - - - - 0.826 0.868 - tudor domain containing 7 b [Source:ZFIN;Acc:ZDB-GENE-150109-14]
26. NRSN2 NRSN2 57 1.693 - 0.713 - 0.980 - - - - -
27. galnt13 ENSDARG00000099227 1059 1.679 - 0.713 - - - 0.966 - - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 [Source:ZFIN;Acc:ZDB-GENE-091204-444]
28. ARX ARX 71 1.663 - 0.713 - 0.950 - - - - -
29. C1H20orf27 C1H20orf27 69 1.66 - - - - - 0.911 0.749 - -
30. ttc7a ENSDARG00000074760 39 1.655 0.753 - - - - - 0.902 - - tetratricopeptide repeat domain 7A [Source:ZFIN;Acc:ZDB-GENE-010319-27]
31. six3a ENSDARG00000058008, ENSDARG00000114971 586 1.654 0.865 - - - - 0.789 - - - SIX homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-990415-127]
32. rmi1 ENSDARG00000041376 674 1.634 - - - - - 0.914 0.720 - - RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-829]
33. fam169aa ENSDARG00000059719, ENSDARG00000115913 474 1.628 - 0.733 - 0.895 - - - - - family with sequence similarity 169, member Aa [Source:ZFIN;Acc:ZDB-GENE-060825-117]
34. adprhl1 ENSDARG00000041589 34 1.626 - - - - - 0.724 0.902 - - ADP-ribosylhydrolase like 1 [Source:ZFIN;Acc:ZDB-GENE-041010-126]
35. gsg1l ENSDARG00000037390 181 1.608 - - - - - - 0.806 0.802 - gsg1-like [Source:ZFIN;Acc:ZDB-GENE-050913-27]
36. CU633988.1 CU633988.1 97 1.604 0.802 - - - - - 0.802 - -
37. uox ENSDARG00000007024 205 1.597 0.733 - - - - - 0.864 - - urate oxidase [Source:ZFIN;Acc:ZDB-GENE-030826-24]
38. slc16a6a ENSDARG00000102793 60 1.575 - 0.701 - - - - 0.874 - - solute carrier family 16, member 6a [Source:ZFIN;Acc:ZDB-GENE-110208-1]
39. TUBB8P7 TUBB8P7 1353 1.569 - 0.722 - 0.847 - - - - -
40. phox2a ENSDARG00000007406 470 1.568 - - - - - 0.728 0.840 - - paired-like homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-000223-14]
41. prok1 ENSDARG00000073948, ENSDARG00000114411 26 1.565 - - 0.784 - - 0.781 - - - prokineticin 1 [Source:ZFIN;Acc:ZDB-GENE-070928-34]
42. rasal3 ENSDARG00000089933 17 1.52 - - 0.784 - - - - 0.736 - RAS protein activator like 3 [Source:ZFIN;Acc:ZDB-GENE-101130-3]
43. pcsk5a ENSDARG00000067537 44 1.515 - 0.713 - - - - 0.802 - - proprotein convertase subtilisin/kexin type 5a [Source:ZFIN;Acc:ZDB-GENE-060531-130]
44. barhl1a ENSDARG00000035508, ENSDARG00000110061, ENSDARG00000112355 374 1.508 0.786 - - - - - 0.722 - - BarH-like homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-050417-212]
45. tmem230a ENSDARG00000027687, ENSDARG00000109832 333 1.506 - - - 0.761 - - 0.745 - - transmembrane protein 230a [Source:ZFIN;Acc:ZDB-GENE-040822-20]
46. tnfaip8l2a ENSDARG00000075592 90 1.499 0.786 0.713 - - - - - - - tumor necrosis factor, alpha-induced protein 8-like 2a [Source:ZFIN;Acc:ZDB-GENE-060616-38]
47. spsb1 ENSDARG00000056515, ENSDARG00000110015 788 1.499 - - - 0.767 - - 0.732 - - splA/ryanodine receptor domain and SOCS box containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6122]
48. dph2 ENSDARG00000078077 36 1.498 - 0.774 - - - 0.724 - - - DPH2 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030219-100]
49. sprn ENSDARG00000056004 128 1.489 - 0.713 - - - 0.776 - - - shadow of prion protein [Source:ZFIN;Acc:ZDB-GENE-031110-1]
50. SKOR2 SKOR2 1041 1.472 - 0.750 - - - 0.722 - - -
51. CU695076.1 CU695076.1 7 1.459 - 0.713 - - - 0.746 - - -
52. kcnip3a ENSDARG00000034229 63 1.455 - 0.713 - - - 0.742 - - - Kv channel interacting protein 3a, calsenilin [Source:ZFIN;Acc:ZDB-GENE-040426-1791]
53. SEMA6B SEMA6B 35 1.452 - 0.713 - - - 0.739 - - -
54. slc12a5b ENSDARG00000078187 329 1.435 - 0.713 - - - 0.722 - - - solute carrier family 12 (potassium/chloride transporter), member 5b [Source:ZFIN;Acc:ZDB-GENE-080707-1]
55. zgc:165453 ENSDARG00000078183 3 1 - - - - - 1.000 - - - zgc:165453 [Source:ZFIN;Acc:ZDB-GENE-070720-13]
56. LRRC41 LRRC41 11 1 1.000 - - - - - - - -
57. hrh3 ENSDARG00000035942 32 1 1.000 - - - - - - - - histamine receptor H3 [Source:ZFIN;Acc:ZDB-GENE-040724-204]
58. ms4a17a.9 ENSDARG00000094854 933 1 1.000 - - - - - - - - membrane-spanning 4-domains, subfamily A, member 17A.9 [Source:ZFIN;Acc:ZDB-GENE-050320-79]
59. prlrb ENSDARG00000045955 12 1 1.000 - - - - - - - - prolactin receptor b [Source:ZFIN;Acc:ZDB-GENE-070705-155]
60. HIPK1 HIPK1 8 1 1.000 - - - - - - - -
61. CABZ01041682.1 CABZ01041682.1 3 1 - - - - - - 1.000 - -
62. cd74b ENSDARG00000036628 8 1 1.000 - - - - - - - - CD74 molecule, major histocompatibility complex, class II invariant chain b [Source:ZFIN;Acc:ZDB-GENE-990910-10]
63. nsfa ENSDARG00000007654 16 1 - - - - - 1.000 - - - N-ethylmaleimide-sensitive factor a [Source:ZFIN;Acc:ZDB-GENE-030616-37]
64. CR933820.2 CR933820.2 152 1 1.000 - - - - - - - -
65. zgc:92249 14 1 - - - - - 1.000 - - - zgc:92249
66. tmc4 ENSDARG00000031757 30 1 1.000 - - - - - - - - transmembrane channel-like 4 [Source:ZFIN;Acc:ZDB-GENE-030131-7489]
67. FAM120B ENSDARG00000030804 1 1 - - - - - 1.000 - - - family with sequence similarity 120B [Source:ZFIN;Acc:ZDB-GENE-040801-119]
68. myo10l1 ENSDARG00000074723 21 1 1.000 - - - - - - - - myosin X-like 1 [Source:ZFIN;Acc:ZDB-GENE-080425-1]
69. bsx ENSDARG00000068976, ENSDARG00000110782 139 1 1.000 - - - - - - - - brain-specific homeobox [Source:ZFIN;Acc:ZDB-GENE-040628-4]
70. chgb ENSDARG00000076500 42 1 1.000 - - - - - - - - chromogranin B [Source:ZFIN;Acc:ZDB-GENE-070705-268]
71. nudt18 ENSDARG00000041576 61 1 - 1.000 - - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 18 [Source:ZFIN;Acc:ZDB-GENE-050417-388]
72. si:ch73-299h12.9 ENSDARG00000104488 81 1 1.000 - - - - - - - - si:ch73-299h12.9 [Source:ZFIN;Acc:ZDB-GENE-081031-87]
73. ifitm5 ENSDARG00000105153 132 1 1.000 - - - - - - - - interferon induced transmembrane protein 5 [Source:ZFIN;Acc:ZDB-GENE-030131-8970]
74. U8 U8 11 1 1.000 - - - - - - - -
75. IKZF4 ENSDARG00000037068 36 1 - - - - - 1.000 - - - IKAROS family zinc finger 4 [Source:ZFIN;Acc:ZDB-GENE-180319-1]
76. 5S_rRNA_15 5S_rRNA_15 9 1 - - - - - 1.000 - - -
77. Mar-03 Mar-03 44 1 1.000 - - - - - - - -
78. cd74a ENSDARG00000009087 20 1 1.000 - - - - - - - - CD74 molecule, major histocompatibility complex, class II invariant chain a [Source:ZFIN;Acc:ZDB-GENE-000901-1]
79. zgc:113263 ENSDARG00000045842 51 1 - - - - - 1.000 - - - zgc:113263 [Source:ZFIN;Acc:ZDB-GENE-050306-34]
80. GTF3A GTF3A 6 1 1.000 - - - - - - - -
81. si:dkeyp-86f8.2 si:dkeyp-86f8.2 5 1 1.000 - - - - - - - -
82. PROC PROC 11 1 1.000 - - - - - - - -
83. C4H12orf39 C4H12orf39 73 1 1.000 - - - - - - - -
84. si:dkeyp-100a1.5 si:dkeyp-100a1.5 8 1 1.000 - - - - - - - -
85. msgn1 ENSDARG00000070546 188 1 1.000 - - - - - - - - mesogenin 1 [Source:ZFIN;Acc:ZDB-GENE-030722-1]
86. wfs1b ENSDARG00000074617 69 1 - - - - - 1.000 - - - Wolfram syndrome 1b (wolframin) [Source:ZFIN;Acc:ZDB-GENE-050809-19]
87. lmod2a ENSDARG00000045634, ENSDARG00000112060, ENSDARG00000113325 2 1 - - - - - 1.000 - - - leiomodin 2 (cardiac) a [Source:ZFIN;Acc:ZDB-GENE-040912-41]
88. BX005294.2 ENSDARG00000109361 3 1 - - - - - 1.000 - - -
89. cyp2n13 ENSDARG00000042953 10 1 - - - - - 1.000 - - - cytochrome P450, family 2, subfamily N, polypeptide 13 [Source:ZFIN;Acc:ZDB-GENE-041001-158]
90. myha ENSDARG00000095930 143 1 - 1.000 - - - - - - - myosin, heavy chain a [Source:ZFIN;Acc:ZDB-GENE-060531-50]
91. exosc4 ENSDARG00000103432 21 1 1.000 - - - - - - - - exosome component 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1702]
92. myo1f ENSDARG00000078734 100 1 1.000 - - - - - - - - myosin IF [Source:ZFIN;Acc:ZDB-GENE-081104-506]
93. xcr1a xcr1a 3 1 - - - - - 1.000 - - -
94. zgc:113162 ENSDARG00000052923 62 1 - 1.000 - - - - - - - zgc:113162 [Source:ZFIN;Acc:ZDB-GENE-050522-530]
95. hmgb2a ENSDARG00000029722 28 1 - - - - - 1.000 - - - high mobility group box 2a [Source:ZFIN;Acc:ZDB-GENE-051120-126]
96. si:dkey-11o1.3 ENSDARG00000093279 2 1 1.000 - - - - - - - - si:dkey-11o1.3 [Source:ZFIN;Acc:ZDB-GENE-100921-37]
97. esyt1b ENSDARG00000014239 8 1 1.000 - - - - - - - - extended synaptotagmin-like protein 1b [Source:ZFIN;Acc:ZDB-GENE-040724-209]
98. si:dkey-11e23.3 si:dkey-11e23.3 3 1 - - - - - 1.000 - - -
99. PLCB1 2 1 - - - - - 1.000 - - - phospholipase C beta 1
100. rtdr1 rtdr1 158 1 1.000 - - - - - - - -

There are 1435 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA