Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for trnt1

Gene Name Gene ID Reads Annotation
trnt1 ENSDARG00000075297, ENSDARG00000116975 366 tRNA nucleotidyl transferase, CCA-adding, 1 [Source:ZFIN;Acc:ZDB-GENE-040625-176]










Genes with expression patterns similar to trnt1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. trnt1 ENSDARG00000075297, ENSDARG00000116975 366 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 tRNA nucleotidyl transferase, CCA-adding, 1 [Source:ZFIN;Acc:ZDB-GENE-040625-176]
2. prmt7 ENSDARG00000051902, ENSDARG00000113277, ENSDARG00000116251 440 2.524 - 0.839 - 0.790 - 0.895 - - - protein arginine methyltransferase 7 [Source:ZFIN;Acc:ZDB-GENE-040426-1560]
3. hiat1b ENSDARG00000043055 757 1.693 - 0.946 - - - 0.747 - - - hippocampus abundant transcript 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2935]
4. btr02 ENSDARG00000052215 401 1.654 - 0.888 - - - - 0.766 - - bloodthirsty-related gene family, member 2 [Source:ZFIN;Acc:ZDB-GENE-060825-228]
5. zic3 ENSDARG00000071497 1448 1.653 - 0.847 - - - 0.806 - - - zic family member 3 heterotaxy 1 (odd-paired homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030708-2]
6. traip ENSDARG00000011262 410 1.648 - - - - - 0.883 0.765 - - TRAF-interacting protein [Source:ZFIN;Acc:ZDB-GENE-040801-30]
7. adarb1a ENSDARG00000041609 476 1.645 - - - 0.840 - 0.805 - - - adenosine deaminase, RNA-specific, B1a [Source:ZFIN;Acc:ZDB-GENE-000627-2]
8. slc6a1b ENSDARG00000039647 1301 1.617 - 0.821 - - - 0.796 - - - solute carrier family 6 (neurotransmitter transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-041114-57]
9. ppp2r2ba 321 1.602 - - - 0.797 - 0.805 - - - protein phosphatase 2, regulatory subunit B, beta a, transcript variant X2
10. nudcd1 ENSDARG00000036158 608 1.599 - 0.897 - - - - 0.702 - - NudC domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050522-483]
11. rnf123 ENSDARG00000031269 519 1.589 - 0.803 - 0.786 - - - - - ring finger protein 123 [Source:ZFIN;Acc:ZDB-GENE-050208-529]
12. tmlhe ENSDARG00000077547 301 1.583 0.840 - - 0.743 - - - - - trimethyllysine hydroxylase, epsilon [Source:ZFIN;Acc:ZDB-GENE-091204-144]
13. sin3aa ENSDARG00000079716 580 1.58 - 0.840 - - - 0.740 - - - SIN3 transcription regulator family member Aa [Source:ZFIN;Acc:ZDB-GENE-070620-3]
14. fancd2 ENSDARG00000053574 247 1.568 - - - 0.796 - 0.772 - - - FA complementation group D2 [Source:ZFIN;Acc:ZDB-GENE-040116-5]
15. BX470189.1 ENSDARG00000067658 399 1.567 - 0.802 - 0.765 - - - - - uncharacterized LOC100150296 [Source:NCBI gene;Acc:100150296]
16. LIN9 ENSDARG00000028475 227 1.567 - - - - - 0.771 0.796 - - lin-9 DREAM MuvB core complex component [Source:ZFIN;Acc:ZDB-GENE-030131-1747]
17. slc52a3 ENSDARG00000042737 67 1.567 - 0.845 - - - - 0.722 - - solute carrier family 52 (riboflavin transporter), member 3 [Source:ZFIN;Acc:ZDB-GENE-060421-4490]
18. zbtb8b ENSDARG00000035889 680 1.562 - 0.853 - 0.709 - - - - - zinc finger and BTB domain containing 8B [Source:ZFIN;Acc:ZDB-GENE-050417-42]
19. tcta ENSDARG00000044194 1183 1.547 - 0.708 - - - 0.839 - - - T cell leukemia translocation altered [Source:ZFIN;Acc:ZDB-GENE-040718-325]
20. pnoca ENSDARG00000025024 467 1.539 - 0.715 - - - 0.824 - - - prepronociceptin a [Source:ZFIN;Acc:ZDB-GENE-101229-1]
21. glipr2l ENSDARG00000016837 440 1.538 - 0.821 - 0.717 - - - - - GLI pathogenesis-related 2, like [Source:ZFIN;Acc:ZDB-GENE-041010-53]
22. pla2g7 ENSDARG00000003584 365 1.536 - 0.780 - - - - 0.756 - - phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma) [Source:ZFIN;Acc:ZDB-GENE-040426-2248]
23. hecw1 hecw1 241 1.534 - - - 0.736 - 0.798 - - -
24. CR318603.2 ENSDARG00000105536 199 1.528 0.701 - - 0.827 - - - - -
25. thap4 ENSDARG00000077323 434 1.527 - - - 0.778 - 0.749 - - - THAP domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-070912-5]
26. rasa1a ENSDARG00000035535 2007 1.524 - 0.709 - - - 0.815 - - - RAS p21 protein activator (GTPase activating protein) 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4694]
27. tbcela ENSDARG00000002682 1179 1.523 - - - - 0.728 - 0.795 - - tubulin folding cofactor E-like a [Source:ZFIN;Acc:ZDB-GENE-040426-1719]
28. MON2 ENSDARG00000099798 2359 1.521 - 0.736 - - - 0.785 - - - MON2 homolog, regulator of endosome-to-Golgi trafficking [Source:ZFIN;Acc:ZDB-GENE-030131-2712]
29. CABZ01055343.2 CABZ01055343.2 10312 1.519 - 0.768 - - - - 0.751 - -
30. ttll11 ENSDARG00000060374, ENSDARG00000113807 225 1.519 - - - - - 0.719 0.800 - - tubulin tyrosine ligase-like family, member 11 [Source:ZFIN;Acc:ZDB-GENE-061013-747]
31. trappc12 ENSDARG00000060101 809 1.517 - - - 0.773 - 0.744 - - - trafficking protein particle complex 12 [Source:ZFIN;Acc:ZDB-GENE-070112-1282]
32. CT867948.2 CT867948.2 131 1.506 - - - - - 0.710 0.796 - -
33. fam32al fam32al 5716 1.505 - 0.704 - 0.801 - - - - -
34. scocb ENSDARG00000002217 1844 1.499 - 0.733 - - - 0.766 - - - short coiled-coil protein b [Source:ZFIN;Acc:ZDB-GENE-041010-41]
35. trim2b ENSDARG00000076174 250 1.499 - 0.729 - - - 0.770 - - - tripartite motif containing 2b [Source:ZFIN;Acc:ZDB-GENE-090312-70]
36. si:ch211-208h1.1 si:ch211-208h1.1 262 1.496 - - - - - 0.752 0.744 - -
37. DBF4B ENSDARG00000086550 374 1.493 - 0.790 - - - 0.703 - - - DBF4 zinc finger B [Source:ZFIN;Acc:ZDB-GENE-121214-269]
38. C4H12orf45 C4H12orf45 483 1.492 - - - - - 0.777 0.715 - -
39. zgc:113025 zgc:113025 619 1.469 - - - - - 0.749 0.720 - -
40. phpt1 ENSDARG00000045567 211 1.468 - - - 0.744 - - 0.724 - - phosphohistidine phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-040801-85]
41. st6gal2 st6gal2 1570 1.451 - - - 0.712 - 0.739 - - -
42. ENSDARG00000023499 ENSDARG00000023499 395 1.448 - - - - - 0.736 0.712 - -
43. AL840631.2 AL840631.2 326 0.942 - 0.942 - - - - - - -
44. CT030012.1 ENSDARG00000105611 154 0.939 - - - - - 0.939 - - -
45. si:dkey-94l16.4 ENSDARG00000090142 791 0.937 - 0.937 - - - - - - - si:dkey-94l16.4 [Source:ZFIN;Acc:ZDB-GENE-121214-291]
46. GSG2 GSG2 1162 0.932 - 0.932 - - - - - - -
47. st14b ENSDARG00000044655 415 0.924 - 0.924 - - - - - - - suppression of tumorigenicity 14 (colon carcinoma) b [Source:ZFIN;Acc:ZDB-GENE-061103-613]
48. CABZ01065506.1 CABZ01065506.1 204 0.924 - - - - - 0.924 - - -
49. QRFPR ENSDARG00000101969 47 0.924 - 0.924 - - - - - - - pyroglutamylated RFamide peptide receptor [Source:HGNC Symbol;Acc:HGNC:15565]
50. CABZ01075275.1 CABZ01075275.1 124 0.92 - 0.920 - - - - - - -
51. NECAB3 ENSDARG00000074794 379 0.92 - - - - - 0.920 - - - N-terminal EF-hand calcium binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-131121-74]
52. dpp3 ENSDARG00000020676 2393 0.918 - 0.918 - - - - - - - dipeptidyl-peptidase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1247]
53. AIM1L AIM1L 899 0.914 - 0.914 - - - - - - -
54. C3H16orf58 C3H16orf58 487 0.914 - 0.914 - - - - - - -
55. afmid ENSDARG00000099106 166 0.913 - 0.913 - - - - - - - arylformamidase [Source:ZFIN;Acc:ZDB-GENE-050417-166]
56. cnpy2 ENSDARG00000007207 241 0.91 - 0.910 - - - - - - - canopy FGF signaling regulator 2 [Source:ZFIN;Acc:ZDB-GENE-060315-4]
57. afap1l1a_1 ENSDARG00000089162, ENSDARG00000116849, ENSDARG00000117182 383 0.909 - 0.909 - - - - - - - actin filament associated protein 1-like 1a [Source:ZFIN;Acc:ZDB-GENE-050913-76]
58. nckipsd ENSDARG00000079475 777 0.906 - 0.906 - - - - - - - NCK interacting protein with SH3 domain [Source:ZFIN;Acc:ZDB-GENE-130326-2]
59. PATZ1 ENSDARG00000076584 1116 0.902 - 0.902 - - - - - - - POZ (BTB) and AT hook containing zinc finger 1 [Source:ZFIN;Acc:ZDB-GENE-111223-4]
60. CLSTN2 ENSDARG00000060637 41 0.901 - - - - - - 0.901 - - calsyntenin 2 [Source:ZFIN;Acc:ZDB-GENE-070911-2]
61. zbtb5 1484 0.899 - 0.899 - - - - - - - zinc finger and BTB domain containing 5
62. dazap1 ENSDARG00000070846, ENSDARG00000114578 525 0.895 - - - - - 0.895 - - - DAZ associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-070212-1]
63. RBM12B ENSDARG00000079717 541 0.894 - - - - - 0.894 - - - RNA binding motif protein 12B [Source:ZFIN;Acc:ZDB-GENE-030131-6428]
64. si:ch211-284e13.6 ENSDARG00000092354 929 0.894 - 0.894 - - - - - - - si:ch211-284e13.6 [Source:ZFIN;Acc:ZDB-GENE-060526-163]
65. tspan3a ENSDARG00000034753, ENSDARG00000110293, ENSDARG00000112773 973 0.893 - 0.893 - - - - - - - tetraspanin 3a [Source:ZFIN;Acc:ZDB-GENE-030131-7787]
66. MREG MREG 687 0.893 - 0.893 - - - - - - -
67. snx4 ENSDARG00000022659 751 0.892 - 0.892 - - - - - - - sorting nexin 4 [Source:ZFIN;Acc:ZDB-GENE-030131-1923]
68. amfr 774 0.892 - 0.892 - - - - - - - autocrine motility factor receptor, E3 ubiquitin protein ligase a, transcript variant X1
69. MAD2L2_1 MAD2L2_1 705 0.892 - 0.892 - - - - - - -
70. prox1a ENSDARG00000055158 1411 0.892 - - - - - 0.892 - - - prospero homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-397]
71. wipi2 ENSDARG00000037871 425 0.89 - - - - - - 0.890 - - WD repeat domain, phosphoinositide interacting 2 [Source:ZFIN;Acc:ZDB-GENE-040718-488]
72. RLIM ENSDARG00000079306 514 0.889 - 0.889 - - - - - - - ring finger protein, LIM domain interacting [Source:ZFIN;Acc:ZDB-GENE-120809-2]
73. TONSL ENSDARG00000071294, ENSDARG00000116200 285 0.889 - 0.889 - - - - - - - tonsoku-like, DNA repair protein [Source:ZFIN;Acc:ZDB-GENE-041111-230]
74. gstal gstal 1865 0.889 - 0.889 - - - - - - -
75. asb2b ENSDARG00000102490 311 0.887 - 0.887 - - - - - - - ankyrin repeat and SOCS box containing 2b [Source:ZFIN;Acc:ZDB-GENE-040426-20]
76. xrcc6bp1 662 0.886 - 0.886 - - - - - - - XRCC6 binding protein 1
77. prr15la ENSDARG00000025615 77 0.886 - 0.886 - - - - - - - proline rich 15-like a [Source:ZFIN;Acc:ZDB-GENE-040801-218]
78. dhrs7 ENSDARG00000003444 812 0.885 - - - - - 0.885 - - - dehydrogenase/reductase (SDR family) member 7 [Source:ZFIN;Acc:ZDB-GENE-060825-21]
79. lpar2a ENSDARG00000042338 285 0.885 - 0.885 - - - - - - - lysophosphatidic acid receptor 2a [Source:ZFIN;Acc:ZDB-GENE-040801-97]
80. abhd14b ENSDARG00000100531 333 0.884 - 0.884 - - - - - - - abhydrolase domain containing 14B [Source:ZFIN;Acc:ZDB-GENE-040426-1342]
81. znf143b ENSDARG00000041581, ENSDARG00000111018, ENSDARG00000112408 1140 0.883 - 0.883 - - - - - - - zinc finger protein 143b [Source:ZFIN;Acc:ZDB-GENE-040426-1586]
82. lrp11 ENSDARG00000034076 313 0.881 - - - - - 0.881 - - - low density lipoprotein receptor-related protein 11 [Source:ZFIN;Acc:ZDB-GENE-030131-7847]
83. slc39a6 ENSDARG00000068143 1039 0.879 - 0.879 - - - - - - - solute carrier family 39 (zinc transporter), member 6 [Source:ZFIN;Acc:ZDB-GENE-030131-3023]
84. bub1ba ENSDARG00000078825 330 0.879 - - - - - 0.879 - - - BUB1 mitotic checkpoint serine/threonine kinase Ba [Source:ZFIN;Acc:ZDB-GENE-041014-120]
85. ercc4 ENSDARG00000014161 2167 0.878 - 0.878 - - - - - - - excision repair cross-complementation group 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5533]
86. frmd8 ENSDARG00000073696 2661 0.877 - 0.877 - - - - - - - FERM domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-090812-5]
87. si:dkey-188i13.11 ENSDARG00000092895 548 0.876 - 0.876 - - - - - - - si:dkey-188i13.11 [Source:ZFIN;Acc:ZDB-GENE-090313-209]
88. kirrel3l ENSDARG00000104665 499 0.876 - 0.876 - - - - - - - kirre like nephrin family adhesion molecule 3, like [Source:ZFIN;Acc:ZDB-GENE-070831-1]
89. rfwd2 740 0.876 - 0.876 - - - - - - - ring finger and WD repeat domain 2, transcript variant X1
90. DUSP23 DUSP23 121 0.875 - - - - - - 0.875 - -
91. DENND4B ENSDARG00000102914 1001 0.875 - - - - - - 0.875 - - DENN/MADD domain containing 4B [Source:ZFIN;Acc:ZDB-GENE-130530-684]
92. rnf150a ENSDARG00000024827 1903 0.874 - - - - - - 0.874 - - ring finger protein 150a [Source:ZFIN;Acc:ZDB-GENE-060213-1]
93. tfe3a ENSDARG00000098903 1530 0.874 - - - - - 0.874 - - - transcription factor binding to IGHM enhancer 3a [Source:ZFIN;Acc:ZDB-GENE-010919-2]
94. minpp1b ENSDARG00000045172 174 0.874 - 0.874 - - - - - - - multiple inositol-polyphosphate phosphatase 1b [Source:ZFIN;Acc:ZDB-GENE-040426-888]
95. rras ENSDARG00000006553 1665 0.873 - 0.873 - - - - - - - RAS related [Source:ZFIN;Acc:ZDB-GENE-041010-217]
96. emp1 ENSDARG00000069632 251 0.873 - - - - - 0.873 - - - epithelial membrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-070822-2]
97. BX465203.3 BX465203.3 178 0.872 - 0.872 - - - - - - -
98. cmbl ENSDARG00000073786 456 0.871 - 0.871 - - - - - - - carboxymethylenebutenolidase homolog (Pseudomonas) [Source:ZFIN;Acc:ZDB-GENE-071004-21]
99. ube2d2l ENSDARG00000099749 1462 0.871 - - - - - 0.871 - - - ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast), like [Source:ZFIN;Acc:ZDB-GENE-030131-7384]
100. cant1a ENSDARG00000012192 1324 0.871 - 0.871 - - - - - - - calcium activated nucleotidase 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2441]

There are 1477 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA